Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:25:20 (29935): wrapper (7.7.26015): starting
09:25:20 (29935): wrapper: running run_atlas (--nthreads 8)
[2025-07-11 09:25:20] Arguments: --nthreads 8
[2025-07-11 09:25:20] Threads: 8
[2025-07-11 09:25:20] Checking for CVMFS
[2025-07-11 09:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 09:25:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 09:25:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 09:25:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 09:25:23] 2.11.2.0 9794 86173 130512 148186 1 17 15247377 25165824 2574 130560 0 65696995 99.877 40997281 3362 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-11 09:25:23] CVMFS is ok
[2025-07-11 09:25:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 09:25:23] Checking for apptainer binary...
[2025-07-11 09:25:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 09:25:23] Running /usr/bin/apptainer --version
[2025-07-11 09:25:23] apptainer version 1.3.2-1.el7
[2025-07-11 09:25:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 09:25:28] cg-vwn292.simple-grid.lan
[2025-07-11 09:25:28] apptainer works
[2025-07-11 09:25:28] Set ATHENA_PROC_NUMBER=8
[2025-07-11 09:25:28] Set ATHENA_CORE_NUMBER=8
[2025-07-11 09:25:28] Starting ATLAS job with PandaID=6721478354
[2025-07-11 09:25:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 15:46:37]  *** The last 200 lines of the pilot log: ***
[2025-07-11 15:46:37] 2025-07-11 12:43:00,795 | INFO     | fitting pss+swap vs Time
[2025-07-11 15:46:37] 2025-07-11 12:43:00,796 | INFO     | sum of square deviations: 9059954057.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,799 | INFO     | sum of deviations: 16832042716.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,799 | INFO     | mean x: 1752228277.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,799 | INFO     | mean y: 2537137.840909091
[2025-07-11 15:46:37] 2025-07-11 12:43:00,799 | INFO     | -- intersect: -3252841535.205624
[2025-07-11 15:46:37] 2025-07-11 12:43:00,799 | INFO     | intersect: -3252841535.205624
[2025-07-11 15:46:37] 2025-07-11 12:43:00,800 | INFO     | chi2: 2.3410238437281254
[2025-07-11 15:46:37] 2025-07-11 12:43:00,800 | INFO     | sum of square deviations: 8625843592.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,803 | INFO     | sum of deviations: 36854706842.00001
[2025-07-11 15:46:37] 2025-07-11 12:43:00,803 | INFO     | mean x: 1752228125.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,803 | INFO     | mean y: 2544075.1617161715
[2025-07-11 15:46:37] 2025-07-11 12:43:00,804 | INFO     | -- intersect: -7484011086.477754
[2025-07-11 15:46:37] 2025-07-11 12:43:00,804 | INFO     | intersect: -7484011086.477754
[2025-07-11 15:46:37] 2025-07-11 12:43:00,804 | INFO     | chi2: 1.5727973891259448
[2025-07-11 15:46:37] 2025-07-11 12:43:00,804 | INFO     | current chi2=1.5727973891259448 (change=32.815832126629054 %)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,805 | INFO     | sum of square deviations: 8205826414.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,808 | INFO     | sum of deviations: 35690621485.50001
[2025-07-11 15:46:37] 2025-07-11 12:43:00,808 | INFO     | mean x: 1752227972.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,808 | INFO     | mean y: 2543652.567114094
[2025-07-11 15:46:37] 2025-07-11 12:43:00,808 | INFO     | -- intersect: -7618639414.661247
[2025-07-11 15:46:37] 2025-07-11 12:43:00,808 | INFO     | intersect: -7618639414.661247
[2025-07-11 15:46:37] 2025-07-11 12:43:00,809 | INFO     | chi2: 1.5732055749350518
[2025-07-11 15:46:37] 2025-07-11 12:43:00,809 | INFO     | current chi2=1.5732055749350518 (change=-0.025952853935864918 %)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,809 | INFO     | right removable region: 297
[2025-07-11 15:46:37] 2025-07-11 12:43:00,809 | INFO     | sum of square deviations: 8625843592.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,812 | INFO     | sum of deviations: -31742069372.999996
[2025-07-11 15:46:37] 2025-07-11 12:43:00,812 | INFO     | mean x: 1752228430.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,812 | INFO     | mean y: 2554078.696369637
[2025-07-11 15:46:37] 2025-07-11 12:43:00,813 | INFO     | -- intersect: 6450544444.993619
[2025-07-11 15:46:37] 2025-07-11 12:43:00,813 | INFO     | intersect: 6450544444.993619
[2025-07-11 15:46:37] 2025-07-11 12:43:00,813 | INFO     | chi2: 0.8982060542059442
[2025-07-11 15:46:37] 2025-07-11 12:43:00,813 | INFO     | current chi2=0.8982060542059442 (change=61.631913463318945 %)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,814 | INFO     | sum of square deviations: 8205826414.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,817 | INFO     | sum of deviations: -30953681095.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,817 | INFO     | mean x: 1752228582.5
[2025-07-11 15:46:37] 2025-07-11 12:43:00,817 | INFO     | mean y: 2553771.6308724834
[2025-07-11 15:46:37] 2025-07-11 12:43:00,817 | INFO     | -- intersect: 6612238404.053571
[2025-07-11 15:46:37] 2025-07-11 12:43:00,817 | INFO     | intersect: 6612238404.053571
[2025-07-11 15:46:37] 2025-07-11 12:43:00,818 | INFO     | chi2: 0.8836595142527292
[2025-07-11 15:46:37] 2025-07-11 12:43:00,818 | INFO     | current chi2=0.8836595142527292 (change=1.6195103434339355 %)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,818 | INFO     | left removable region: 20
[2025-07-11 15:46:37] 2025-07-11 12:43:00,818 | INFO     | sum of square deviations: 6590404498.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,821 | INFO     | sum of deviations: 8275985595.000001
[2025-07-11 15:46:37] 2025-07-11 12:43:00,821 | INFO     | mean x: 1752228552.0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,821 | INFO     | mean y: 2553004.812274368
[2025-07-11 15:46:37] 2025-07-11 12:43:00,821 | INFO     | -- intersect: -2197830637.785153
[2025-07-11 15:46:37] 2025-07-11 12:43:00,821 | INFO     | intersect: -2197830637.785153
[2025-07-11 15:46:37] 2025-07-11 12:43:00,822 | INFO     | chi2: 0.0233950580495771
[2025-07-11 15:46:37] 2025-07-11 12:43:00,822 | INFO     | -- intersect: -2197830637.785153
[2025-07-11 15:46:37] 2025-07-11 12:43:00,822 | INFO     | current memory leak: 1.26 B/s (using 277 data points, chi2=0.02)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | ..............................
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . Timing measurements:
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . get job = 0 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . initial setup = 2 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . payload setup = 11 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . stage-in = 0 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . payload execution = 18779 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,823 | INFO     | . stage-out = 3 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,824 | INFO     | . log creation = 1 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,824 | INFO     | ..............................
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | 
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | job summary report
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | --------------------------------------------------
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | PanDA job id: 6721478354
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | task id: 45482148
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | errors: (none)
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 15:46:37] 2025-07-11 12:43:00,977 | INFO     | pilot state: finished 
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | transexitcode: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | exeerrorcode: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | exeerrordiag: 
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | exitcode: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | exitmsg: OK
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | cpuconsumptiontime: 72651 s
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | nevents: 400
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | neventsw: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | pid: 8148
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | pgrp: 8148
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | corecount: 8
[2025-07-11 15:46:37] 2025-07-11 12:43:00,978 | INFO     | event service: False
[2025-07-11 15:46:37] 2025-07-11 12:43:00,979 | INFO     | sizes: {0: 2382023, 1: 2382222, 12: 2382222, 14: 2382512, 23: 2382540, 18796: 2414871, 18800: 2435250, 18803: 2435334, 18897: 2435528}
[2025-07-11 15:46:37] 2025-07-11 12:43:00,979 | INFO     | --------------------------------------------------
[2025-07-11 15:46:37] 2025-07-11 12:43:00,979 | INFO     | 
[2025-07-11 15:46:37] 2025-07-11 12:43:00,979 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-11 15:46:37] 2025-07-11 12:43:01,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | job 6721478354 has completed (purged errors)
[2025-07-11 15:46:37] 2025-07-11 12:43:01,328 | INFO     | overall cleanup function is called
[2025-07-11 15:46:37] 2025-07-11 12:43:02,337 | INFO     | --- collectZombieJob: --- 10, [8148]
[2025-07-11 15:46:37] 2025-07-11 12:43:02,337 | INFO     | zombie collector waiting for pid 8148
[2025-07-11 15:46:37] 2025-07-11 12:43:02,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 15:46:37] 2025-07-11 12:43:02,337 | INFO     | collected zombie processes
[2025-07-11 15:46:37] 2025-07-11 12:43:02,337 | INFO     | will attempt to kill all subprocesses of pid=8148
[2025-07-11 15:46:37] 2025-07-11 12:43:02,446 | INFO     | process IDs to be killed: [8148] (in reverse order)
[2025-07-11 15:46:37] 2025-07-11 12:43:03,438 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 15:46:37] 2025-07-11 12:43:03,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 15:46:37] 2025-07-11 12:43:03,441 | INFO     | did not find any defunct processes belonging to 8148
[2025-07-11 15:46:37] 2025-07-11 12:43:03,444 | INFO     | did not find any defunct processes belonging to 8148
[2025-07-11 15:46:37] 2025-07-11 12:43:03,444 | INFO     | ready for new job
[2025-07-11 15:46:37] 2025-07-11 12:43:03,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 15:46:37] 2025-07-11 12:43:03,446 | INFO     | ***************************************
[2025-07-11 15:46:37] 2025-07-11 12:43:03,446 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 15:46:37] 2025-07-11 12:43:03,446 | INFO     | ***************************************
[2025-07-11 15:46:37] 2025-07-11 12:43:03,446 | INFO     | 
[2025-07-11 15:46:37] 2025-07-11 12:43:03,447 | INFO     | pilot is running in a VM
[2025-07-11 15:46:37] 2025-07-11 12:43:03,447 | INFO     | architecture information:
[2025-07-11 15:46:37] 2025-07-11 12:43:03,460 | INFO     | executing command: cat /etc/os-release
[2025-07-11 15:46:37] 2025-07-11 12:43:03,647 | INFO     | cat /etc/os-release:
[2025-07-11 15:46:37] NAME="CentOS Linux"
[2025-07-11 15:46:37] VERSION="7 (Core)"
[2025-07-11 15:46:37] ID="centos"
[2025-07-11 15:46:37] ID_LIKE="rhel fedora"
[2025-07-11 15:46:37] VERSION_ID="7"
[2025-07-11 15:46:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 15:46:37] ANSI_COLOR="0;31"
[2025-07-11 15:46:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 15:46:37] HOME_URL="https://www.centos.org/"
[2025-07-11 15:46:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 15:46:37] 
[2025-07-11 15:46:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 15:46:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 15:46:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 15:46:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 15:46:37] 
[2025-07-11 15:46:37] 2025-07-11 12:43:03,647 | INFO     | ***************************************
[2025-07-11 15:46:37] 2025-07-11 12:43:04,151 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-11 15:46:37] 2025-07-11 12:43:04,424 | INFO     | sufficient remaining disk space (492190040064 B)
[2025-07-11 15:46:37] 2025-07-11 12:43:04,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 15:46:37] 2025-07-11 12:43:04,425 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 15:46:37] 2025-07-11 12:43:04,425 | INFO     | update_server=False
[2025-07-11 15:46:37] 2025-07-11 12:43:04,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 15:46:37] 2025-07-11 12:43:04,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 15:46:37] 2025-07-11 12:43:04,439 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-11 15:46:37] 2025-07-11 12:43:04,439 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-11 15:46:37] 2025-07-11 12:43:04,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 15:46:37] 2025-07-11 12:43:04,439 | INFO     | will abort loop
[2025-07-11 15:46:37] 2025-07-11 12:43:04,734 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 15:46:37] 2025-07-11 12:43:04,840 | INFO     | all data control threads have been joined
[2025-07-11 15:46:37] 2025-07-11 12:43:04,890 | INFO     | all job control threads have been joined
[2025-07-11 15:46:37] 2025-07-11 12:43:05,219 | INFO     | all payload control threads have been joined
[2025-07-11 15:46:37] 2025-07-11 12:43:05,431 | INFO     | [job] retrieve thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,445 | INFO     | [job] job monitor thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,551 | INFO     | [data] copytool_in thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,595 | INFO     | [payload] validate_post thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,692 | INFO     | [payload] failed_post thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,846 | INFO     | [data] control thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,896 | INFO     | [job] control thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:05,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 15:46:37] 2025-07-11 12:43:06,131 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:06,221 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:06,225 | INFO     | [payload] control thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:06,276 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:06,575 | INFO     | [job] validate thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:06,741 | INFO     | [data] copytool_out thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:07,000 | INFO     | [job] queue monitor thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:08,435 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 15:46:37] 2025-07-11 12:43:08,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008201357120)>', '<ExcThread(monitor, started 140007402628864)>']
[2025-07-11 15:46:37] 2025-07-11 12:43:13,753 | INFO     | all workflow threads have been joined
[2025-07-11 15:46:37] 2025-07-11 12:43:13,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 15:46:37] 2025-07-11 12:43:13,753 | INFO     | traces error code: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:13,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 15:46:37] 2025-07-11 12:43:34,088 | INFO     | PID=1546 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-11 15:46:37] 2025-07-11 12:43:34,089 | INFO     | .. there are 9 such processes running
[2025-07-11 15:46:37] 2025-07-11 12:43:34,090 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 15:46:37] 2025-07-11 12:43:34,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 15:46:37] 2025-07-11 12:43:34,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 15:46:37] 2025-07-11 12:43:34,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 15:46:37] 2025-07-11 12:43:34,091 | CRITICAL | thread 'MainThread' is not alive
[2025-07-11 15:46:37] 2025-07-11 12:43:34,091 | INFO     | [monitor] control thread has ended
[2025-07-11 15:46:37] 2025-07-11 12:43:34,214 [wrapper] ==== pilot stdout END ====
[2025-07-11 15:46:37] 2025-07-11 12:43:34,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 15:46:37] 2025-07-11 12:43:34,232 [wrapper] pilotpid: 1546
[2025-07-11 15:46:37] 2025-07-11 12:43:34,240 [wrapper] Pilot exit status: 0
[2025-07-11 15:46:37] 2025-07-11 12:43:34,303 [wrapper] pandaids: 6721478354
[2025-07-11 15:46:37] 2025-07-11 12:43:34,395 [wrapper] cleanup supervisor_pilot   455 1547
[2025-07-11 15:46:37] 2025-07-11 12:43:34,405 [wrapper] Test setup, not cleaning
[2025-07-11 15:46:37] 2025-07-11 12:43:34,410 [wrapper] apfmon messages muted
[2025-07-11 15:46:37] 2025-07-11 12:43:34,416 [wrapper] ==== wrapper stdout END ====
[2025-07-11 15:46:37] 2025-07-11 12:43:34,423 [wrapper] ==== wrapper stderr END ====
[2025-07-11 15:46:37]  *** Error codes and diagnostics ***
[2025-07-11 15:46:37]     "exeErrorCode": 0,
[2025-07-11 15:46:37]     "exeErrorDiag": "",
[2025-07-11 15:46:37]     "pilotErrorCode": 0,
[2025-07-11 15:46:37]     "pilotErrorDiag": "",
[2025-07-11 15:46:37]  *** Listing of results directory ***
[2025-07-11 15:46:37] total 578356
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc    530466 Jul  7 09:59 pilot3.tar.gz
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc      5112 Jul  7 10:30 queuedata.json
[2025-07-11 15:46:37] -rwx------. 1 boinc boinc     36292 Jul  7 10:30 runpilot2-wrapper.sh
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc       100 Jul 11 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 15:46:37] -rwxr-xr-x. 1 boinc boinc      7986 Jul 11 09:25 run_atlas
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc       105 Jul 11 09:25 job.xml
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc 320687976 Jul 11 09:25 EVNT.45482146._000654.pool.root.1
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc     15095 Jul 11 09:25 start_atlas.sh
[2025-07-11 15:46:37] drwxrwx--x. 2 boinc boinc        68 Jul 11 09:25 shared
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc    542911 Jul 11 09:25 input.tar.gz
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc      6391 Jul 11 09:25 init_data.xml
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc         0 Jul 11 09:25 boinc_lockfile
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc      2616 Jul 11 09:25 pandaJob.out
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc    975880 Jul 11 09:27 agis_schedconf.cvmfs.json
[2025-07-11 15:46:37] drwx------. 4 boinc boinc      4096 Jul 11 09:27 pilot3
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc 263594947 Jul 11 14:39 HITS.45482148._016416.pool.root.1
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc       531 Jul 11 14:40 boinc_task_state.xml
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc      1014 Jul 11 14:41 memory_monitor_summary.json
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc   1588641 Jul 11 14:41 agis_ddmendpoints.agis.ALL.json
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc    435674 Jul 11 14:41 log.45482148._016416.job.log.tgz.1
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc      7773 Jul 11 14:43 heartbeat.json
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc        95 Jul 11 14:43 pilot_heartbeat.json
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc       889 Jul 11 14:43 pilotlog.txt
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc   1616839 Jul 11 14:43 log.45482148._016416.job.log.1
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc       357 Jul 11 14:43 output.list
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc       620 Jul 11 14:43 runtime_log
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc   2068480 Jul 11 14:43 result.tar.gz
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc      8660 Jul 11 14:43 runtime_log.err
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc       657 Jul 11 14:43 903NDmWQws7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHwELDmqd7GTo.diag
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc      8192 Jul 11 15:46 boinc_mmap_file
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc        28 Jul 11 15:46 wrapper_checkpoint.txt
[2025-07-11 15:46:37] -rw-r--r--. 1 boinc boinc     20597 Jul 11 15:46 stderr.txt
[2025-07-11 15:46:37] HITS file was successfully produced:
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc 263594947 Jul 11 14:39 shared/HITS.pool.root.1
[2025-07-11 15:46:37]  *** Contents of shared directory: ***
[2025-07-11 15:46:37] total 573160
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc 320687976 Jul 11 09:25 ATLAS.root_0
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc     15095 Jul 11 09:25 start_atlas.sh
[2025-07-11 15:46:37] -rw-r--r--. 2 boinc boinc    542911 Jul 11 09:25 input.tar.gz
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc 263594947 Jul 11 14:39 HITS.pool.root.1
[2025-07-11 15:46:37] -rw-------. 1 boinc boinc   2068480 Jul 11 14:43 result.tar.gz
15:46:39 (29935): run_atlas exited; CPU time 72871.161358
15:46:39 (29935): called boinc_finish(0)

</stderr_txt>
]]>

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