| Name | 1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo_2 |
| Workunit | 233518406 |
| Created | 7 Jul 2025, 11:20:23 UTC |
| Sent | 7 Jul 2025, 13:12:18 UTC |
| Report deadline | 15 Jul 2025, 13:12:18 UTC |
| Received | 11 Jul 2025, 20:58:39 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10855372 |
| Run time | 14 min 35 sec |
| CPU time | 2 hours 36 min 11 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 24.24 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.51 GB |
| Peak swap size | 2.84 GB |
| Peak disk usage | 921.82 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
04:38:56 (3203473): wrapper (7.7.26015): starting
04:38:56 (3203473): wrapper: running run_atlas (--nthreads 4)
[2025-07-10 04:38:56] Arguments: --nthreads 4
[2025-07-10 04:38:56] Threads: 4
[2025-07-10 04:38:56] Checking for CVMFS
[2025-07-10 04:38:56] No cvmfs_config command found, will try listing directly
[2025-07-10 04:38:56] CVMFS is ok
[2025-07-10 04:38:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-10 04:38:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-10 04:38:56] Further information can be found at the LHC@home message board.
[2025-07-10 04:38:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-10 04:38:56] Checking for apptainer binary...
[2025-07-10 04:38:56] which: no apptainer in ((null))
[2025-07-10 04:38:56] apptainer is not installed, using version from CVMFS
[2025-07-10 04:38:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-10 04:38:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-10 04:38:57] apptainer works
[2025-07-10 04:38:57] Set ATHENA_PROC_NUMBER=4
[2025-07-10 04:38:57] Set ATHENA_CORE_NUMBER=4
[2025-07-10 04:38:57] Starting ATLAS job with PandaID=6721339926
[2025-07-10 04:38:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:53:55 (3371689): wrapper (7.7.26015): starting
06:53:55 (3371689): wrapper: running run_atlas (--nthreads 4)
[2025-07-10 06:53:55] Arguments: --nthreads 4
[2025-07-10 06:53:55] Threads: 4
[2025-07-10 06:53:55] This job has been restarted, cleaning up previous attempt
[2025-07-10 06:53:55] Checking for CVMFS
[2025-07-10 06:53:55] No cvmfs_config command found, will try listing directly
[2025-07-10 06:53:55] CVMFS is ok
[2025-07-10 06:53:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-10 06:53:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-10 06:53:55] Further information can be found at the LHC@home message board.
[2025-07-10 06:53:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-10 06:53:55] Checking for apptainer binary...
[2025-07-10 06:53:55] which: no apptainer in ((null))
[2025-07-10 06:53:55] apptainer is not installed, using version from CVMFS
[2025-07-10 06:53:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-10 06:53:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-10 06:53:56] apptainer works
[2025-07-10 06:53:56] Set ATHENA_PROC_NUMBER=4
[2025-07-10 06:53:56] Set ATHENA_CORE_NUMBER=4
[2025-07-10 06:53:56] Starting ATLAS job with PandaID=6721339926
[2025-07-10 06:53:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-10 07:08:51] Job failed
[2025-07-10 07:08:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 07:08:51] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 07:08:51] + mv ATLAS.root_0 EVNT.45482146._000586.pool.root.1
[2025-07-10 07:08:51] mv: 'ATLAS.root_0' and 'EVNT.45482146._000586.pool.root.1' are the same file
[2025-07-10 07:08:51] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-10 07:08:51] + umask 077
[2025-07-10 07:08:51] ++ date +%s
[2025-07-10 07:08:51] + ACCOUNTING_STARTTIME=1752123236
[2025-07-10 07:08:51] + echo 'Detecting resource accounting method available for the job.'
[2025-07-10 07:08:51] Detecting resource accounting method available for the job.
[2025-07-10 07:08:51] + JOB_ACCOUNTING=
[2025-07-10 07:08:51] + command -v arc-job-cgroup
[2025-07-10 07:08:51] + '[' -z '' ']'
[2025-07-10 07:08:51] + GNU_TIME=/usr/bin/time
[2025-07-10 07:08:51] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-10 07:08:51] Looking for /usr/bin/time tool for accounting measurements
[2025-07-10 07:08:51] + '[' '!' -z /usr/bin/time ']'
[2025-07-10 07:08:51] + /usr/bin/time --version
[2025-07-10 07:08:51] + echo 'GNU time found and will be used for job accounting.'
[2025-07-10 07:08:51] GNU time found and will be used for job accounting.
[2025-07-10 07:08:51] + JOB_ACCOUNTING=gnutime
[2025-07-10 07:08:51] + '[' -z gnutime ']'
[2025-07-10 07:08:51] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-10 07:08:51] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-10 07:08:51] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-10 07:08:51] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-10 07:08:51] + export PILOT_NOKILL=YES
[2025-07-10 07:08:51] + PILOT_NOKILL=YES
[2025-07-10 07:08:51] + export GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 07:08:51] + GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 07:08:51] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 07:08:51] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 07:08:51] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-10 07:08:51] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-10 07:08:51] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-10 07:08:51] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot80/slots/0
[2025-07-10 07:08:51] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0.diag
[2025-07-10 07:08:51] + '[' '!' -z '' ']'
[2025-07-10 07:08:51] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-10 07:08:51] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-10 07:08:51] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-10 07:08:51] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-10 07:08:51] + '[' '!' -z '' ']'
[2025-07-10 07:08:51] + '[' -z yes ']'
[2025-07-10 07:08:51] ++ pwd
[2025-07-10 07:08:51] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 07:08:51] + runtimeenvironments=
[2025-07-10 07:08:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-10 07:08:51] + RTE_function_0 1
[2025-07-10 07:08:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 07:08:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 07:08:51] + export BOINC_APP=ATLAS
[2025-07-10 07:08:51] + BOINC_APP=ATLAS
[2025-07-10 07:08:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 07:08:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 07:08:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 07:08:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 07:08:51] + '[' -z 1 ']'
[2025-07-10 07:08:51] + '[' 1 == 1 ']'
[2025-07-10 07:08:51] + shift
[2025-07-10 07:08:51] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 07:08:51] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 07:08:51] + '[' 0 -ne 0 ']'
[2025-07-10 07:08:51] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-10 07:08:51] + '[' -f /etc/os-release ']'
[2025-07-10 07:08:51] +++ cat /etc/os-release
[2025-07-10 07:08:51] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-10 07:08:51] +++ NAME='CentOS Linux'
[2025-07-10 07:08:51] +++ VERSION='7 (Core)'
[2025-07-10 07:08:51] +++ ID=centos
[2025-07-10 07:08:51] +++ ID_LIKE='rhel fedora'
[2025-07-10 07:08:51] +++ VERSION_ID=7
[2025-07-10 07:08:51] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-10 07:08:51] +++ ANSI_COLOR='0;31'
[2025-07-10 07:08:51] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-10 07:08:51] +++ HOME_URL=https://www.centos.org/
[2025-07-10 07:08:51] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-10 07:08:51] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-10 07:08:51] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-10 07:08:51] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-10 07:08:51] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-10 07:08:51] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-10 07:08:51] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-10 07:08:51] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-10 07:08:51] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-10 07:08:51] + HOME=/scratch/boinc/var/slot80/slots/0
[2025-07-10 07:08:51] + export HOME
[2025-07-10 07:08:51] + cd /scratch/boinc/var/slot80/slots/0
[2025-07-10 07:08:51] + '[' '!' -z '' ']'
[2025-07-10 07:08:51] + '[' -z '' ']'
[2025-07-10 07:08:51] ++ /bin/hostname -f
[2025-07-10 07:08:51] + nodename=skurut17.grid.cesnet.cz
[2025-07-10 07:08:51] + echo nodename=skurut17.grid.cesnet.cz
[2025-07-10 07:08:51] + echo Processors=2
[2025-07-10 07:08:51] + echo Nodecount=1
[2025-07-10 07:08:51] + echo Benchmark=HEPSPEC:1.0
[2025-07-10 07:08:51] + executable=./runpilot2-wrapper.sh
[2025-07-10 07:08:51] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-10 07:08:51] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-10 07:08:51] ++ head -n 1
[2025-07-10 07:08:51] ++ tr -d '\0'
[2025-07-10 07:08:51] + line1='#!/bin/bash'
[2025-07-10 07:08:51] ++ echo '#!/bin/bash'
[2025-07-10 07:08:51] ++ sed -n 's/^#! *//p'
[2025-07-10 07:08:51] + shebang=/bin/bash
[2025-07-10 07:08:51] ++ echo /bin/bash
[2025-07-10 07:08:51] ++ awk '{print $1}'
[2025-07-10 07:08:51] + interpreter=/bin/bash
[2025-07-10 07:08:51] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-10 07:08:51] + '[' x/bin/bash = x ']'
[2025-07-10 07:08:51] + type /bin/bash
[2025-07-10 07:08:51] + '[' xgnutime = xgnutime ']'
[2025-07-10 07:08:51] + /usr/bin/time -o /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-10 07:08:51] + RESULT=2
[2025-07-10 07:08:51] + sed -i -e /nodename=/d /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 07:08:51] ++ grep domain_name init_data.xml
[2025-07-10 07:08:51] ++ awk -F '>' '{print $2}'
[2025-07-10 07:08:51] ++ awk -F '<' '{print $1}'
[2025-07-10 07:08:51] ++ sed -e 's# #_#g'
[2025-07-10 07:08:51] + hostname=skurut17.grid.cesnet.cz
[2025-07-10 07:08:51] ++ grep user_name init_data.xml
[2025-07-10 07:08:51] ++ awk -F '>' '{print $2}'
[2025-07-10 07:08:51] ++ awk -F '<' '{print $1}'
[2025-07-10 07:08:51] ++ sed -e 's# #_#g'
[2025-07-10 07:08:51] + username=praguelcg2
[2025-07-10 07:08:51] + nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-10 07:08:51] + echo nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-10 07:08:51] + '[' -n 4 ']'
[2025-07-10 07:08:51] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 07:08:51] + echo exitcode=2
[2025-07-10 07:08:51] + runtimeenvironments=
[2025-07-10 07:08:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-10 07:08:51] + RTE_function_0 2
[2025-07-10 07:08:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 07:08:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 07:08:51] + export BOINC_APP=ATLAS
[2025-07-10 07:08:51] + BOINC_APP=ATLAS
[2025-07-10 07:08:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 07:08:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 07:08:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 07:08:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 07:08:51] + '[' -z 2 ']'
[2025-07-10 07:08:51] + '[' 2 == 1 ']'
[2025-07-10 07:08:51] + '[' 0 -ne 0 ']'
[2025-07-10 07:08:51] + echo 'zip all output files'
[2025-07-10 07:08:51] + flist='*.diag '
[2025-07-10 07:08:51] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 07:08:51] + '[' -e ./heartbeat.json ']'
[2025-07-10 07:08:51] + flist='*.diag ./heartbeat.json'
[2025-07-10 07:08:51] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 07:08:51] + '[' -e ./output.list ']'
[2025-07-10 07:08:51] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 07:08:51] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-10 07:08:51] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1'
[2025-07-10 07:08:51] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 07:08:51] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-10 07:08:51] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1'
[2025-07-10 07:08:51] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 07:08:51] + '[' -e ./gmlog/ ']'
[2025-07-10 07:08:51] + '[' -f output.list ']'
[2025-07-10 07:08:51] + tar cvf result.tar.gz 1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1
[2025-07-10 07:08:51] + '[' xgnutime = xcgroup ']'
[2025-07-10 07:08:51] + '[' -n '' ']'
[2025-07-10 07:08:51] + '[' -n '' ']'
[2025-07-10 07:08:51] ++ date +%s
[2025-07-10 07:08:51] + ACCOUNTING_ENDTIME=1752123427
[2025-07-10 07:08:51] ++ date -d '1970-01-01 UTC 1752123236 seconds' +%Y%m%d%H%M%SZ
[2025-07-10 07:08:51] + echo LRMSStartTime=20250710065356Z
[2025-07-10 07:08:51] ++ date -d '1970-01-01 UTC 1752123427 seconds' +%Y%m%d%H%M%SZ
[2025-07-10 07:08:51] + echo LRMSEndTime=20250710065707Z
[2025-07-10 07:08:51] + echo walltime=191
[2025-07-10 07:08:51] + echo exitcode=2
[2025-07-10 07:08:51] + exit 2
[2025-07-10 07:08:51] ./runtime_log.err
[2025-07-10 07:08:51] ./log.45482148._014685.job.log.1
[2025-07-10 07:08:51] ./PanDA_Pilot-6721339926/PoolFileCatalog.xml
[2025-07-10 07:08:51] ./PanDA_Pilot-6721339926/prmon.log
[2025-07-10 07:08:51] ./PanDA_Pilot-6721339926/pilotlog.txt
[2025-07-10 07:08:51] ./PanDA_Pilot-6721339926/log.EVNTtoHITS
[2025-07-10 07:08:51] ./pilotlog.txt
[2025-07-10 07:08:51] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-10 07:08:51] ./pilot3/pilot/util/loggingsupport.py
[2025-07-10 07:08:51] ./pilot3/pilot/util/realtimelogger.py
[2025-07-10 07:08:51] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-10 07:08:51] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-10 07:08:51] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-10 07:08:51] ./runtime_log
20:02:24 (18217): wrapper (7.7.26015): starting
20:02:24 (18217): wrapper: running run_atlas (--nthreads 4)
[2025-07-10 20:02:24] Arguments: --nthreads 4
[2025-07-10 20:02:24] Threads: 4
[2025-07-10 20:02:24] This job has been restarted, cleaning up previous attempt
[2025-07-10 20:02:24] Checking for CVMFS
[2025-07-10 20:02:24] No cvmfs_config command found, will try listing directly
[2025-07-10 20:02:24] CVMFS is ok
[2025-07-10 20:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-10 20:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-10 20:02:24] Further information can be found at the LHC@home message board.
[2025-07-10 20:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-10 20:02:24] Checking for apptainer binary...
[2025-07-10 20:02:24] which: no apptainer in ((null))
[2025-07-10 20:02:24] apptainer is not installed, using version from CVMFS
[2025-07-10 20:02:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-10 20:02:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-10 20:02:25] apptainer works
[2025-07-10 20:02:25] Set ATHENA_PROC_NUMBER=4
[2025-07-10 20:02:25] Set ATHENA_CORE_NUMBER=4
[2025-07-10 20:02:25] Starting ATLAS job with PandaID=6721339926
[2025-07-10 20:02:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-10 20:05:56] Job failed
[2025-07-10 20:05:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 20:05:56] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 20:05:56] + mv ATLAS.root_0 EVNT.45482146._000586.pool.root.1
[2025-07-10 20:05:56] mv: 'ATLAS.root_0' and 'EVNT.45482146._000586.pool.root.1' are the same file
[2025-07-10 20:05:56] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-10 20:05:56] + umask 077
[2025-07-10 20:05:56] ++ date +%s
[2025-07-10 20:05:56] + ACCOUNTING_STARTTIME=1752170545
[2025-07-10 20:05:56] + echo 'Detecting resource accounting method available for the job.'
[2025-07-10 20:05:56] Detecting resource accounting method available for the job.
[2025-07-10 20:05:56] + JOB_ACCOUNTING=
[2025-07-10 20:05:56] + command -v arc-job-cgroup
[2025-07-10 20:05:56] + '[' -z '' ']'
[2025-07-10 20:05:56] + GNU_TIME=/usr/bin/time
[2025-07-10 20:05:56] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-10 20:05:56] Looking for /usr/bin/time tool for accounting measurements
[2025-07-10 20:05:56] + '[' '!' -z /usr/bin/time ']'
[2025-07-10 20:05:56] + /usr/bin/time --version
[2025-07-10 20:05:56] + echo 'GNU time found and will be used for job accounting.'
[2025-07-10 20:05:56] GNU time found and will be used for job accounting.
[2025-07-10 20:05:56] + JOB_ACCOUNTING=gnutime
[2025-07-10 20:05:56] + '[' -z gnutime ']'
[2025-07-10 20:05:56] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-10 20:05:56] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-10 20:05:56] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-10 20:05:56] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-10 20:05:56] + export PILOT_NOKILL=YES
[2025-07-10 20:05:56] + PILOT_NOKILL=YES
[2025-07-10 20:05:56] + export GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 20:05:56] + GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 20:05:56] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 20:05:56] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-10 20:05:56] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-10 20:05:56] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-10 20:05:56] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-10 20:05:56] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot80/slots/0
[2025-07-10 20:05:56] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0.diag
[2025-07-10 20:05:56] + '[' '!' -z '' ']'
[2025-07-10 20:05:56] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-10 20:05:56] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-10 20:05:56] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-10 20:05:56] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-10 20:05:56] + '[' '!' -z '' ']'
[2025-07-10 20:05:56] + '[' -z yes ']'
[2025-07-10 20:05:56] ++ pwd
[2025-07-10 20:05:56] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 20:05:56] + runtimeenvironments=
[2025-07-10 20:05:56] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-10 20:05:56] + RTE_function_0 1
[2025-07-10 20:05:56] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 20:05:56] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 20:05:56] + export BOINC_APP=ATLAS
[2025-07-10 20:05:56] + BOINC_APP=ATLAS
[2025-07-10 20:05:56] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 20:05:56] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 20:05:56] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 20:05:56] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 20:05:56] + '[' -z 1 ']'
[2025-07-10 20:05:56] + '[' 1 == 1 ']'
[2025-07-10 20:05:56] + shift
[2025-07-10 20:05:56] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 20:05:56] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-10 20:05:56] + '[' 0 -ne 0 ']'
[2025-07-10 20:05:56] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-10 20:05:56] + '[' -f /etc/os-release ']'
[2025-07-10 20:05:56] +++ cat /etc/os-release
[2025-07-10 20:05:56] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-10 20:05:56] +++ NAME='CentOS Linux'
[2025-07-10 20:05:56] +++ VERSION='7 (Core)'
[2025-07-10 20:05:56] +++ ID=centos
[2025-07-10 20:05:56] +++ ID_LIKE='rhel fedora'
[2025-07-10 20:05:56] +++ VERSION_ID=7
[2025-07-10 20:05:56] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-10 20:05:56] +++ ANSI_COLOR='0;31'
[2025-07-10 20:05:56] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-10 20:05:56] +++ HOME_URL=https://www.centos.org/
[2025-07-10 20:05:56] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-10 20:05:56] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-10 20:05:56] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-10 20:05:56] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-10 20:05:56] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-10 20:05:56] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-10 20:05:56] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-10 20:05:56] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-10 20:05:56] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-10 20:05:56] + HOME=/scratch/boinc/var/slot80/slots/0
[2025-07-10 20:05:56] + export HOME
[2025-07-10 20:05:56] + cd /scratch/boinc/var/slot80/slots/0
[2025-07-10 20:05:56] + '[' '!' -z '' ']'
[2025-07-10 20:05:56] + '[' -z '' ']'
[2025-07-10 20:05:56] ++ /bin/hostname -f
[2025-07-10 20:05:56] + nodename=skurut17.grid.cesnet.cz
[2025-07-10 20:05:56] + echo nodename=skurut17.grid.cesnet.cz
[2025-07-10 20:05:56] + echo Processors=2
[2025-07-10 20:05:56] + echo Nodecount=1
[2025-07-10 20:05:56] + echo Benchmark=HEPSPEC:1.0
[2025-07-10 20:05:56] + executable=./runpilot2-wrapper.sh
[2025-07-10 20:05:56] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-10 20:05:56] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-10 20:05:56] ++ head -n 1
[2025-07-10 20:05:56] ++ tr -d '\0'
[2025-07-10 20:05:56] + line1='#!/bin/bash'
[2025-07-10 20:05:56] ++ echo '#!/bin/bash'
[2025-07-10 20:05:56] ++ sed -n 's/^#! *//p'
[2025-07-10 20:05:56] + shebang=/bin/bash
[2025-07-10 20:05:56] ++ echo /bin/bash
[2025-07-10 20:05:56] ++ awk '{print $1}'
[2025-07-10 20:05:56] + interpreter=/bin/bash
[2025-07-10 20:05:56] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-10 20:05:56] + '[' x/bin/bash = x ']'
[2025-07-10 20:05:56] + type /bin/bash
[2025-07-10 20:05:56] + '[' xgnutime = xgnutime ']'
[2025-07-10 20:05:56] + /usr/bin/time -o /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-10 20:05:56] + RESULT=2
[2025-07-10 20:05:56] + sed -i -e /nodename=/d /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 20:05:56] ++ grep domain_name init_data.xml
[2025-07-10 20:05:56] ++ awk -F '>' '{print $2}'
[2025-07-10 20:05:56] ++ sed -e 's# #_#g'
[2025-07-10 20:05:56] ++ awk -F '<' '{print $1}'
[2025-07-10 20:05:56] + hostname=skurut17.grid.cesnet.cz
[2025-07-10 20:05:56] ++ grep user_name init_data.xml
[2025-07-10 20:05:56] ++ awk -F '>' '{print $2}'
[2025-07-10 20:05:56] ++ awk -F '<' '{print $1}'
[2025-07-10 20:05:56] ++ sed -e 's# #_#g'
[2025-07-10 20:05:56] + username=praguelcg2
[2025-07-10 20:05:56] + nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-10 20:05:56] + echo nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-10 20:05:56] + '[' -n 4 ']'
[2025-07-10 20:05:56] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-10 20:05:56] + echo exitcode=2
[2025-07-10 20:05:56] + runtimeenvironments=
[2025-07-10 20:05:56] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-10 20:05:56] + RTE_function_0 2
[2025-07-10 20:05:56] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 20:05:56] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-10 20:05:56] + export BOINC_APP=ATLAS
[2025-07-10 20:05:56] + BOINC_APP=ATLAS
[2025-07-10 20:05:56] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 20:05:56] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-10 20:05:56] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 20:05:56] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-10 20:05:56] + '[' -z 2 ']'
[2025-07-10 20:05:56] + '[' 2 == 1 ']'
[2025-07-10 20:05:56] + '[' 0 -ne 0 ']'
[2025-07-10 20:05:56] + echo 'zip all output files'
[2025-07-10 20:05:56] + flist='*.diag '
[2025-07-10 20:05:56] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 20:05:56] + '[' -e ./heartbeat.json ']'
[2025-07-10 20:05:56] + flist='*.diag ./heartbeat.json'
[2025-07-10 20:05:56] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 20:05:56] + '[' -e ./output.list ']'
[2025-07-10 20:05:56] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 20:05:56] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-10 20:05:56] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1'
[2025-07-10 20:05:56] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 20:05:56] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-10 20:05:56] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1'
[2025-07-10 20:05:56] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-10 20:05:56] + '[' -e ./gmlog/ ']'
[2025-07-10 20:05:56] + '[' -f output.list ']'
[2025-07-10 20:05:56] + tar cvf result.tar.gz 1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1
[2025-07-10 20:05:56] + '[' xgnutime = xcgroup ']'
[2025-07-10 20:05:56] + '[' -n '' ']'
[2025-07-10 20:05:56] + '[' -n '' ']'
[2025-07-10 20:05:56] ++ date +%s
[2025-07-10 20:05:56] + ACCOUNTING_ENDTIME=1752170737
[2025-07-10 20:05:56] ++ date -d '1970-01-01 UTC 1752170545 seconds' +%Y%m%d%H%M%SZ
[2025-07-10 20:05:56] + echo LRMSStartTime=20250710200225Z
[2025-07-10 20:05:56] ++ date -d '1970-01-01 UTC 1752170737 seconds' +%Y%m%d%H%M%SZ
[2025-07-10 20:05:56] + echo LRMSEndTime=20250710200537Z
[2025-07-10 20:05:56] + echo walltime=192
[2025-07-10 20:05:56] + echo exitcode=2
[2025-07-10 20:05:56] + exit 2
[2025-07-10 20:05:56] ./runtime_log.err
[2025-07-10 20:05:56] ./log.45482148._014685.job.log.1
[2025-07-10 20:05:56] ./PanDA_Pilot-6721339926/PoolFileCatalog.xml
[2025-07-10 20:05:56] ./PanDA_Pilot-6721339926/prmon.log
[2025-07-10 20:05:56] ./PanDA_Pilot-6721339926/pilotlog.txt
[2025-07-10 20:05:56] ./PanDA_Pilot-6721339926/log.EVNTtoHITS
[2025-07-10 20:05:56] ./pilotlog.txt
[2025-07-10 20:05:56] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-10 20:05:56] ./pilot3/pilot/util/loggingsupport.py
[2025-07-10 20:05:56] ./pilot3/pilot/util/realtimelogger.py
[2025-07-10 20:05:56] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-10 20:05:56] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-10 20:05:56] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-10 20:05:56] ./runtime_log
08:19:01 (788440): wrapper (7.7.26015): starting
08:19:01 (788440): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 08:19:01] Arguments: --nthreads 4
[2025-07-11 08:19:01] Threads: 4
[2025-07-11 08:19:01] This job has been restarted, cleaning up previous attempt
[2025-07-11 08:19:01] Checking for CVMFS
[2025-07-11 08:19:01] No cvmfs_config command found, will try listing directly
[2025-07-11 08:19:01] CVMFS is ok
[2025-07-11 08:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 08:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 08:19:01] Further information can be found at the LHC@home message board.
[2025-07-11 08:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 08:19:01] Checking for apptainer binary...
[2025-07-11 08:19:01] which: no apptainer in ((null))
[2025-07-11 08:19:01] apptainer is not installed, using version from CVMFS
[2025-07-11 08:19:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 08:19:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-11 08:19:01] apptainer works
[2025-07-11 08:19:01] Set ATHENA_PROC_NUMBER=4
[2025-07-11 08:19:01] Set ATHENA_CORE_NUMBER=4
[2025-07-11 08:19:01] Starting ATLAS job with PandaID=6721339926
[2025-07-11 08:19:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 08:29:16] Job failed
[2025-07-11 08:29:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 08:29:16] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 08:29:16] + mv ATLAS.root_0 EVNT.45482146._000586.pool.root.1
[2025-07-11 08:29:16] mv: 'ATLAS.root_0' and 'EVNT.45482146._000586.pool.root.1' are the same file
[2025-07-11 08:29:16] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-11 08:29:16] + umask 077
[2025-07-11 08:29:16] ++ date +%s
[2025-07-11 08:29:16] + ACCOUNTING_STARTTIME=1752214741
[2025-07-11 08:29:16] + echo 'Detecting resource accounting method available for the job.'
[2025-07-11 08:29:16] Detecting resource accounting method available for the job.
[2025-07-11 08:29:16] + JOB_ACCOUNTING=
[2025-07-11 08:29:16] + command -v arc-job-cgroup
[2025-07-11 08:29:16] + '[' -z '' ']'
[2025-07-11 08:29:16] + GNU_TIME=/usr/bin/time
[2025-07-11 08:29:16] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-11 08:29:16] Looking for /usr/bin/time tool for accounting measurements
[2025-07-11 08:29:16] + '[' '!' -z /usr/bin/time ']'
[2025-07-11 08:29:16] + /usr/bin/time --version
[2025-07-11 08:29:16] + echo 'GNU time found and will be used for job accounting.'
[2025-07-11 08:29:16] GNU time found and will be used for job accounting.
[2025-07-11 08:29:16] + JOB_ACCOUNTING=gnutime
[2025-07-11 08:29:16] + '[' -z gnutime ']'
[2025-07-11 08:29:16] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 08:29:16] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 08:29:16] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-11 08:29:16] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-11 08:29:16] + export PILOT_NOKILL=YES
[2025-07-11 08:29:16] + PILOT_NOKILL=YES
[2025-07-11 08:29:16] + export GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 08:29:16] + GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 08:29:16] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 08:29:16] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 08:29:16] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 08:29:16] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 08:29:16] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 08:29:16] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot80/slots/0
[2025-07-11 08:29:16] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0.diag
[2025-07-11 08:29:16] + '[' '!' -z '' ']'
[2025-07-11 08:29:16] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-11 08:29:16] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-11 08:29:16] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-11 08:29:16] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-11 08:29:16] + '[' '!' -z '' ']'
[2025-07-11 08:29:16] + '[' -z yes ']'
[2025-07-11 08:29:16] ++ pwd
[2025-07-11 08:29:16] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 08:29:16] + runtimeenvironments=
[2025-07-11 08:29:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:29:16] + RTE_function_0 1
[2025-07-11 08:29:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:29:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:29:16] + export BOINC_APP=ATLAS
[2025-07-11 08:29:16] + BOINC_APP=ATLAS
[2025-07-11 08:29:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:29:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:29:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:29:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:29:16] + '[' -z 1 ']'
[2025-07-11 08:29:16] + '[' 1 == 1 ']'
[2025-07-11 08:29:16] + shift
[2025-07-11 08:29:16] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 08:29:16] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 08:29:16] + '[' 0 -ne 0 ']'
[2025-07-11 08:29:16] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:29:16] + '[' -f /etc/os-release ']'
[2025-07-11 08:29:16] +++ cat /etc/os-release
[2025-07-11 08:29:16] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-11 08:29:16] +++ NAME='CentOS Linux'
[2025-07-11 08:29:16] +++ VERSION='7 (Core)'
[2025-07-11 08:29:16] +++ ID=centos
[2025-07-11 08:29:16] +++ ID_LIKE='rhel fedora'
[2025-07-11 08:29:16] +++ VERSION_ID=7
[2025-07-11 08:29:16] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-11 08:29:16] +++ ANSI_COLOR='0;31'
[2025-07-11 08:29:16] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-11 08:29:16] +++ HOME_URL=https://www.centos.org/
[2025-07-11 08:29:16] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-11 08:29:16] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-11 08:29:16] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-11 08:29:16] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-11 08:29:16] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-11 08:29:16] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-11 08:29:16] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-11 08:29:16] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-11 08:29:16] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-11 08:29:16] + HOME=/scratch/boinc/var/slot80/slots/0
[2025-07-11 08:29:16] + export HOME
[2025-07-11 08:29:16] + cd /scratch/boinc/var/slot80/slots/0
[2025-07-11 08:29:16] + '[' '!' -z '' ']'
[2025-07-11 08:29:16] + '[' -z '' ']'
[2025-07-11 08:29:16] ++ /bin/hostname -f
[2025-07-11 08:29:16] + nodename=skurut17.grid.cesnet.cz
[2025-07-11 08:29:16] + echo nodename=skurut17.grid.cesnet.cz
[2025-07-11 08:29:16] + echo Processors=2
[2025-07-11 08:29:16] + echo Nodecount=1
[2025-07-11 08:29:16] + echo Benchmark=HEPSPEC:1.0
[2025-07-11 08:29:16] + executable=./runpilot2-wrapper.sh
[2025-07-11 08:29:16] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-11 08:29:16] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-11 08:29:16] ++ head -n 1
[2025-07-11 08:29:16] ++ tr -d '\0'
[2025-07-11 08:29:16] + line1='#!/bin/bash'
[2025-07-11 08:29:16] ++ echo '#!/bin/bash'
[2025-07-11 08:29:16] ++ sed -n 's/^#! *//p'
[2025-07-11 08:29:16] + shebang=/bin/bash
[2025-07-11 08:29:16] ++ echo /bin/bash
[2025-07-11 08:29:16] ++ awk '{print $1}'
[2025-07-11 08:29:16] + interpreter=/bin/bash
[2025-07-11 08:29:16] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-11 08:29:16] + '[' x/bin/bash = x ']'
[2025-07-11 08:29:16] + type /bin/bash
[2025-07-11 08:29:16] + '[' xgnutime = xgnutime ']'
[2025-07-11 08:29:16] + /usr/bin/time -o /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-11 08:29:16] + RESULT=2
[2025-07-11 08:29:16] + sed -i -e /nodename=/d /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 08:29:16] ++ grep domain_name init_data.xml
[2025-07-11 08:29:16] ++ awk -F '>' '{print $2}'
[2025-07-11 08:29:16] ++ awk -F '<' '{print $1}'
[2025-07-11 08:29:16] ++ sed -e 's# #_#g'
[2025-07-11 08:29:16] + hostname=skurut17.grid.cesnet.cz
[2025-07-11 08:29:16] ++ grep user_name init_data.xml
[2025-07-11 08:29:16] ++ awk -F '>' '{print $2}'
[2025-07-11 08:29:16] ++ awk -F '<' '{print $1}'
[2025-07-11 08:29:16] ++ sed -e 's# #_#g'
[2025-07-11 08:29:16] + username=praguelcg2
[2025-07-11 08:29:16] + nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-11 08:29:16] + echo nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-11 08:29:16] + '[' -n 4 ']'
[2025-07-11 08:29:16] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 08:29:16] + echo exitcode=2
[2025-07-11 08:29:16] + runtimeenvironments=
[2025-07-11 08:29:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:29:16] + RTE_function_0 2
[2025-07-11 08:29:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:29:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:29:16] + export BOINC_APP=ATLAS
[2025-07-11 08:29:16] + BOINC_APP=ATLAS
[2025-07-11 08:29:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:29:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:29:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:29:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:29:16] + '[' -z 2 ']'
[2025-07-11 08:29:16] + '[' 2 == 1 ']'
[2025-07-11 08:29:16] + '[' 0 -ne 0 ']'
[2025-07-11 08:29:16] + echo 'zip all output files'
[2025-07-11 08:29:16] + flist='*.diag '
[2025-07-11 08:29:16] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 08:29:16] + '[' -e ./heartbeat.json ']'
[2025-07-11 08:29:16] + flist='*.diag ./heartbeat.json'
[2025-07-11 08:29:16] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 08:29:16] + '[' -e ./output.list ']'
[2025-07-11 08:29:16] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 08:29:16] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-11 08:29:16] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1'
[2025-07-11 08:29:16] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 08:29:16] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-11 08:29:16] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1'
[2025-07-11 08:29:16] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 08:29:16] + '[' -e ./gmlog/ ']'
[2025-07-11 08:29:16] + '[' -f output.list ']'
[2025-07-11 08:29:16] + tar cvf result.tar.gz 1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1
[2025-07-11 08:29:16] + '[' xgnutime = xcgroup ']'
[2025-07-11 08:29:16] + '[' -n '' ']'
[2025-07-11 08:29:16] + '[' -n '' ']'
[2025-07-11 08:29:16] ++ date +%s
[2025-07-11 08:29:16] + ACCOUNTING_ENDTIME=1752214931
[2025-07-11 08:29:16] ++ date -d '1970-01-01 UTC 1752214741 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 08:29:16] + echo LRMSStartTime=20250711081901Z
[2025-07-11 08:29:16] ++ date -d '1970-01-01 UTC 1752214931 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 08:29:16] + echo LRMSEndTime=20250711082211Z
[2025-07-11 08:29:16] + echo walltime=190
[2025-07-11 08:29:16] + echo exitcode=2
[2025-07-11 08:29:16] + exit 2
[2025-07-11 08:29:16] ./runtime_log.err
[2025-07-11 08:29:16] ./log.45482148._014685.job.log.1
[2025-07-11 08:29:16] ./PanDA_Pilot-6721339926/PoolFileCatalog.xml
[2025-07-11 08:29:16] ./PanDA_Pilot-6721339926/prmon.log
[2025-07-11 08:29:16] ./PanDA_Pilot-6721339926/pilotlog.txt
[2025-07-11 08:29:16] ./PanDA_Pilot-6721339926/log.EVNTtoHITS
[2025-07-11 08:29:16] ./pilotlog.txt
[2025-07-11 08:29:16] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-11 08:29:16] ./pilot3/pilot/util/loggingsupport.py
[2025-07-11 08:29:16] ./pilot3/pilot/util/realtimelogger.py
[2025-07-11 08:29:16] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-11 08:29:16] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-11 08:29:16] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-11 08:29:16] ./runtime_log
22:21:51 (1722217): wrapper (7.7.26015): starting
22:21:51 (1722217): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 22:21:51] Arguments: --nthreads 4
[2025-07-11 22:21:51] Threads: 4
[2025-07-11 22:21:51] This job has been restarted, cleaning up previous attempt
[2025-07-11 22:21:51] Checking for CVMFS
[2025-07-11 22:21:51] No cvmfs_config command found, will try listing directly
[2025-07-11 22:21:51] CVMFS is ok
[2025-07-11 22:21:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 22:21:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 22:21:51] Further information can be found at the LHC@home message board.
[2025-07-11 22:21:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 22:21:51] Checking for apptainer binary...
[2025-07-11 22:21:51] which: no apptainer in ((null))
[2025-07-11 22:21:51] apptainer is not installed, using version from CVMFS
[2025-07-11 22:21:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 22:21:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-11 22:21:51] apptainer works
[2025-07-11 22:21:51] Set ATHENA_PROC_NUMBER=4
[2025-07-11 22:21:51] Set ATHENA_CORE_NUMBER=4
[2025-07-11 22:21:51] Starting ATLAS job with PandaID=6721339926
[2025-07-11 22:21:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 22:24:57] Job failed
[2025-07-11 22:24:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 22:24:57] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 22:24:57] + mv ATLAS.root_0 EVNT.45482146._000586.pool.root.1
[2025-07-11 22:24:57] mv: 'ATLAS.root_0' and 'EVNT.45482146._000586.pool.root.1' are the same file
[2025-07-11 22:24:57] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-11 22:24:57] + umask 077
[2025-07-11 22:24:57] ++ date +%s
[2025-07-11 22:24:57] + ACCOUNTING_STARTTIME=1752265312
[2025-07-11 22:24:57] + echo 'Detecting resource accounting method available for the job.'
[2025-07-11 22:24:57] Detecting resource accounting method available for the job.
[2025-07-11 22:24:57] + JOB_ACCOUNTING=
[2025-07-11 22:24:57] + command -v arc-job-cgroup
[2025-07-11 22:24:57] + '[' -z '' ']'
[2025-07-11 22:24:57] + GNU_TIME=/usr/bin/time
[2025-07-11 22:24:57] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-11 22:24:57] Looking for /usr/bin/time tool for accounting measurements
[2025-07-11 22:24:57] + '[' '!' -z /usr/bin/time ']'
[2025-07-11 22:24:57] + /usr/bin/time --version
[2025-07-11 22:24:57] + echo 'GNU time found and will be used for job accounting.'
[2025-07-11 22:24:57] GNU time found and will be used for job accounting.
[2025-07-11 22:24:57] + JOB_ACCOUNTING=gnutime
[2025-07-11 22:24:57] + '[' -z gnutime ']'
[2025-07-11 22:24:57] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 22:24:57] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 22:24:57] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-11 22:24:57] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-07/BOINC_MCORE/6721339926.out
[2025-07-11 22:24:57] + export PILOT_NOKILL=YES
[2025-07-11 22:24:57] + PILOT_NOKILL=YES
[2025-07-11 22:24:57] + export GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 22:24:57] + GRID_GLOBAL_JOBID=1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 22:24:57] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 22:24:57] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo
[2025-07-11 22:24:57] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 22:24:57] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 22:24:57] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 22:24:57] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot80/slots/0
[2025-07-11 22:24:57] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot80/slots/0/log.45482148._014685.job.log.1
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0.diag
[2025-07-11 22:24:57] + '[' '!' -z '' ']'
[2025-07-11 22:24:57] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-11 22:24:57] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-11 22:24:57] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-11 22:24:57] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-11 22:24:57] + '[' '!' -z '' ']'
[2025-07-11 22:24:57] + '[' -z yes ']'
[2025-07-11 22:24:57] ++ pwd
[2025-07-11 22:24:57] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 22:24:57] + runtimeenvironments=
[2025-07-11 22:24:57] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 22:24:57] + RTE_function_0 1
[2025-07-11 22:24:57] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 22:24:57] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 22:24:57] + export BOINC_APP=ATLAS
[2025-07-11 22:24:57] + BOINC_APP=ATLAS
[2025-07-11 22:24:57] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 22:24:57] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 22:24:57] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 22:24:57] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 22:24:57] + '[' -z 1 ']'
[2025-07-11 22:24:57] + '[' 1 == 1 ']'
[2025-07-11 22:24:57] + shift
[2025-07-11 22:24:57] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 22:24:57] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot80/slots/0/
[2025-07-11 22:24:57] + '[' 0 -ne 0 ']'
[2025-07-11 22:24:57] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-11 22:24:57] + '[' -f /etc/os-release ']'
[2025-07-11 22:24:57] +++ cat /etc/os-release
[2025-07-11 22:24:57] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-11 22:24:57] +++ NAME='CentOS Linux'
[2025-07-11 22:24:57] +++ VERSION='7 (Core)'
[2025-07-11 22:24:57] +++ ID=centos
[2025-07-11 22:24:57] +++ ID_LIKE='rhel fedora'
[2025-07-11 22:24:57] +++ VERSION_ID=7
[2025-07-11 22:24:57] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-11 22:24:57] +++ ANSI_COLOR='0;31'
[2025-07-11 22:24:57] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-11 22:24:57] +++ HOME_URL=https://www.centos.org/
[2025-07-11 22:24:57] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-11 22:24:57] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-11 22:24:57] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-11 22:24:57] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-11 22:24:57] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-11 22:24:57] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-11 22:24:57] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-11 22:24:57] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-11 22:24:57] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-11 22:24:57] + HOME=/scratch/boinc/var/slot80/slots/0
[2025-07-11 22:24:57] + export HOME
[2025-07-11 22:24:57] + cd /scratch/boinc/var/slot80/slots/0
[2025-07-11 22:24:57] + '[' '!' -z '' ']'
[2025-07-11 22:24:57] + '[' -z '' ']'
[2025-07-11 22:24:57] ++ /bin/hostname -f
[2025-07-11 22:24:57] + nodename=skurut17.grid.cesnet.cz
[2025-07-11 22:24:57] + echo nodename=skurut17.grid.cesnet.cz
[2025-07-11 22:24:57] + echo Processors=2
[2025-07-11 22:24:57] + echo Nodecount=1
[2025-07-11 22:24:57] + echo Benchmark=HEPSPEC:1.0
[2025-07-11 22:24:57] + executable=./runpilot2-wrapper.sh
[2025-07-11 22:24:57] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-11 22:24:57] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-11 22:24:57] ++ head -n 1
[2025-07-11 22:24:57] ++ tr -d '\0'
[2025-07-11 22:24:57] + line1='#!/bin/bash'
[2025-07-11 22:24:57] ++ echo '#!/bin/bash'
[2025-07-11 22:24:57] ++ sed -n 's/^#! *//p'
[2025-07-11 22:24:57] + shebang=/bin/bash
[2025-07-11 22:24:57] ++ echo /bin/bash
[2025-07-11 22:24:57] ++ awk '{print $1}'
[2025-07-11 22:24:57] + interpreter=/bin/bash
[2025-07-11 22:24:57] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-11 22:24:57] + '[' x/bin/bash = x ']'
[2025-07-11 22:24:57] + type /bin/bash
[2025-07-11 22:24:57] + '[' xgnutime = xgnutime ']'
[2025-07-11 22:24:57] + /usr/bin/time -o /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-11 22:24:57] + RESULT=2
[2025-07-11 22:24:57] + sed -i -e /nodename=/d /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 22:24:57] ++ grep domain_name init_data.xml
[2025-07-11 22:24:57] ++ awk -F '>' '{print $2}'
[2025-07-11 22:24:57] ++ awk -F '<' '{print $1}'
[2025-07-11 22:24:57] ++ sed -e 's# #_#g'
[2025-07-11 22:24:57] + hostname=skurut17.grid.cesnet.cz
[2025-07-11 22:24:57] ++ grep user_name init_data.xml
[2025-07-11 22:24:57] ++ awk -F '>' '{print $2}'
[2025-07-11 22:24:57] ++ awk -F '<' '{print $1}'
[2025-07-11 22:24:57] ++ sed -e 's# #_#g'
[2025-07-11 22:24:57] + username=praguelcg2
[2025-07-11 22:24:57] + nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-11 22:24:57] + echo nodename=praguelcg2@skurut17.grid.cesnet.cz
[2025-07-11 22:24:57] + '[' -n 4 ']'
[2025-07-11 22:24:57] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot80/slots/0/1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag
[2025-07-11 22:24:57] + echo exitcode=2
[2025-07-11 22:24:57] + runtimeenvironments=
[2025-07-11 22:24:57] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 22:24:57] + RTE_function_0 2
[2025-07-11 22:24:57] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 22:24:57] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 22:24:57] + export BOINC_APP=ATLAS
[2025-07-11 22:24:57] + BOINC_APP=ATLAS
[2025-07-11 22:24:57] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 22:24:57] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 22:24:57] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 22:24:57] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 22:24:57] + '[' -z 2 ']'
[2025-07-11 22:24:57] + '[' 2 == 1 ']'
[2025-07-11 22:24:57] + '[' 0 -ne 0 ']'
[2025-07-11 22:24:57] + echo 'zip all output files'
[2025-07-11 22:24:57] + flist='*.diag '
[2025-07-11 22:24:57] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 22:24:57] + '[' -e ./heartbeat.json ']'
[2025-07-11 22:24:57] + flist='*.diag ./heartbeat.json'
[2025-07-11 22:24:57] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 22:24:57] + '[' -e ./output.list ']'
[2025-07-11 22:24:57] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 22:24:57] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-11 22:24:57] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1'
[2025-07-11 22:24:57] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 22:24:57] + '[' -e ./log.45482148._014685.job.log.1 ']'
[2025-07-11 22:24:57] + flist='*.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1'
[2025-07-11 22:24:57] + for f in ./heartbeat.json ./output.list ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1 ./gmlog/
[2025-07-11 22:24:57] + '[' -e ./gmlog/ ']'
[2025-07-11 22:24:57] + '[' -f output.list ']'
[2025-07-11 22:24:57] + tar cvf result.tar.gz 1wMLDmrpus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfELDmZMexCo.diag ./heartbeat.json ./log.45482148._014685.job.log.1 ./log.45482148._014685.job.log.1
[2025-07-11 22:24:57] + '[' xgnutime = xcgroup ']'
[2025-07-11 22:24:57] + '[' -n '' ']'
[2025-07-11 22:24:57] + '[' -n '' ']'
[2025-07-11 22:24:57] ++ date +%s
[2025-07-11 22:24:57] + ACCOUNTING_ENDTIME=1752265497
[2025-07-11 22:24:57] ++ date -d '1970-01-01 UTC 1752265312 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 22:24:57] + echo LRMSStartTime=20250711222152Z
[2025-07-11 22:24:57] ++ date -d '1970-01-01 UTC 1752265497 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 22:24:57] + echo LRMSEndTime=20250711222457Z
[2025-07-11 22:24:57] + echo walltime=185
[2025-07-11 22:24:57] + echo exitcode=2
[2025-07-11 22:24:57] + exit 2
[2025-07-11 22:24:57] ./runtime_log.err
[2025-07-11 22:24:57] ./log.45482148._014685.job.log.1
[2025-07-11 22:24:57] ./PanDA_Pilot-6721339926/PoolFileCatalog.xml
[2025-07-11 22:24:57] ./PanDA_Pilot-6721339926/prmon.log
[2025-07-11 22:24:57] ./PanDA_Pilot-6721339926/pilotlog.txt
[2025-07-11 22:24:57] ./PanDA_Pilot-6721339926/log.EVNTtoHITS
[2025-07-11 22:24:57] ./pilotlog.txt
[2025-07-11 22:24:57] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-11 22:24:57] ./pilot3/pilot/util/loggingsupport.py
[2025-07-11 22:24:57] ./pilot3/pilot/util/realtimelogger.py
[2025-07-11 22:24:57] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-11 22:24:57] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-11 22:24:57] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-11 22:24:57] ./runtime_log
22:34:58 (1722217): run_atlas exited; CPU time 11.334016
22:34:58 (1722217): app exit status: 0x1
22:34:58 (1722217): called boinc_finish(195)
</stderr_txt>
]]>
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