Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:11 (1283255): wrapper (7.7.26015): starting
21:18:11 (1283255): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 21:18:11] Arguments: --nthreads 12
[2025-07-06 21:18:11] Threads: 12
[2025-07-06 21:18:11] Checking for CVMFS
[2025-07-06 21:18:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 21:18:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 21:18:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 21:18:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 21:18:11] 2.11.3.0 1989253 14664 237744 148029 2 410 27385501 45568000 17535 130560 0 262107664 99.826 148481537 15440 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 21:18:11] CVMFS is ok
[2025-07-06 21:18:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 21:18:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 21:18:11] Further information can be found at the LHC@home message board.
[2025-07-06 21:18:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 21:18:11] Checking for apptainer binary...
[2025-07-06 21:18:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 21:18:11] Running /usr/bin/apptainer --version
[2025-07-06 21:18:11] apptainer version 1.3.3-1.el9
[2025-07-06 21:18:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 21:18:12] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2025-07-06 21:18:12] apptainer works
[2025-07-06 21:18:12] Set ATHENA_PROC_NUMBER=12
[2025-07-06 21:18:12] Set ATHENA_CORE_NUMBER=12
[2025-07-06 21:18:12] Starting ATLAS job with PandaID=6721163619
[2025-07-06 21:18:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 21:21:24]  *** The last 200 lines of the pilot log: ***
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | found no stored workdir sizes
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | WARNING  | wrong length of table data, x=[1751861917.0], y=[722.0] (must be same and length>=4)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | could have reported an average CPU frequency of 3112 MHz (4 samples)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . Timing measurements:
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . get job = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . initial setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-in = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload execution = 11 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-out = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . log creation = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6721163619/pilotlog.txt
[2025-07-06 21:21:24] 2025-07-07 04:20:51,551 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 21:21:24] - Log from pilotlog.txt -
[2025-07-06 21:21:24] 2025-07-07 04:20:51,541 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 21:21:24] 2025-07-07 04:20:51,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | found no stored workdir sizes
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | WARNING  | wrong length of table data, x=[1751861917.0], y=[722.0] (must be same and length>=4)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | could have reported an average CPU frequency of 3112 MHz (4 samples)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . Timing measurements:
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . get job = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . initial setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-in = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload execution = 11 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-out = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . log creation = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6721163619/pilotlog.txt
[2025-07-06 21:21:24] 2025-07-07 04:20:51,551 | WARNING  | 
[2025-07-06 21:21:24] [begin log extracts]
[2025-07-06 21:21:24] - Log from pilotlog.txt -
[2025-07-06 21:21:24] 2025-07-07 04:20:51,541 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 21:21:24] 2025-07-07 04:20:51,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | WARNING  | found no stored workdir sizes
[2025-07-06 21:21:24] 2025-07-07 04:20:51,542 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | WARNING  | wrong length of table data, x=[1751861917.0], y=[722.0] (must be same and length>=4)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | could have reported an average CPU frequency of 3112 MHz (4 samples)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . Timing measurements:
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . get job = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . initial setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload setup = 2 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-in = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . payload execution = 11 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . stage-out = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | . log creation = 0 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | ..............................
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 21:21:24] 2025-07-07 04:20:51,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6721163619/pilotlog.txt
[2025-07-06 21:21:24] [end log extracts]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,551 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,552 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | 
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | job summary report
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | --------------------------------------------------
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | PanDA job id: 6721163619
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | task id: 45482062
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 21:18:42,767 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | pilot state: failed 
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | transexitcode: 65
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | exeerrorcode: 65
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | exitcode: 65
[2025-07-06 21:21:24] 2025-07-07 04:20:51,935 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | cpuconsumptiontime: 12 s
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | nevents: 0
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | neventsw: 0
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | pid: 1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | pgrp: 1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | corecount: 12
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | event service: False
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | sizes: {0: 2366552, 2: 2366814, 11: 2366842, 17: 2389922, 18: 2394214, 20: 2394242, 140: 2394536}
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | --------------------------------------------------
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | 
[2025-07-06 21:21:24] 2025-07-07 04:20:51,936 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | job 6721163619 has completed (purged errors)
[2025-07-06 21:21:24] 2025-07-07 04:20:51,949 | INFO     | overall cleanup function is called
[2025-07-06 21:21:24] 2025-07-07 04:20:52,955 | INFO     | --- collectZombieJob: --- 10, [1293132]
[2025-07-06 21:21:24] 2025-07-07 04:20:52,955 | INFO     | zombie collector waiting for pid 1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:52,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 21:21:24] 2025-07-07 04:20:52,955 | INFO     | collected zombie processes
[2025-07-06 21:21:24] 2025-07-07 04:20:52,955 | INFO     | will attempt to kill all subprocesses of pid=1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:53,084 | INFO     | process IDs to be killed: [1293132] (in reverse order)
[2025-07-06 21:21:24] 2025-07-07 04:20:53,133 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 21:21:24] 2025-07-07 04:20:53,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 21:21:24] 2025-07-07 04:20:53,139 | INFO     | did not find any defunct processes belonging to 1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:53,143 | INFO     | did not find any defunct processes belonging to 1293132
[2025-07-06 21:21:24] 2025-07-07 04:20:53,143 | INFO     | ready for new job
[2025-07-06 21:21:24] 2025-07-07 04:20:53,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 21:21:24] 2025-07-07 04:20:53,144 | INFO     | ***************************************
[2025-07-06 21:21:24] 2025-07-07 04:20:53,144 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 21:21:24] 2025-07-07 04:20:53,144 | INFO     | ***************************************
[2025-07-06 21:21:24] 2025-07-07 04:20:53,144 | INFO     | 
[2025-07-06 21:21:24] 2025-07-07 04:20:53,158 | INFO     | architecture information:
[2025-07-06 21:21:24] 2025-07-07 04:20:53,159 | INFO     | executing command: cat /etc/os-release
[2025-07-06 21:21:24] 2025-07-07 04:20:53,168 | INFO     | cat /etc/os-release:
[2025-07-06 21:21:24] NAME="CentOS Linux"
[2025-07-06 21:21:24] VERSION="7 (Core)"
[2025-07-06 21:21:24] ID="centos"
[2025-07-06 21:21:24] ID_LIKE="rhel fedora"
[2025-07-06 21:21:24] VERSION_ID="7"
[2025-07-06 21:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 21:21:24] ANSI_COLOR="0;31"
[2025-07-06 21:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 21:21:24] HOME_URL="https://www.centos.org/"
[2025-07-06 21:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 21:21:24] 
[2025-07-06 21:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 21:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 21:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 21:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 21:21:24] 
[2025-07-06 21:21:24] 2025-07-07 04:20:53,168 | INFO     | ***************************************
[2025-07-06 21:21:24] 2025-07-07 04:20:53,671 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | INFO     | sufficient remaining disk space (2314078257152 B)
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | INFO     | update_server=False
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 21:21:24] 2025-07-07 04:20:53,681 | INFO     | aborting loop
[2025-07-06 21:21:24] 2025-07-07 04:20:53,847 | INFO     | all data control threads have been joined
[2025-07-06 21:21:24] 2025-07-07 04:20:54,686 | INFO     | [job] retrieve thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:54,687 | INFO     | [job] job monitor thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:54,693 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:54,757 | INFO     | all payload control threads have been joined
[2025-07-06 21:21:24] 2025-07-07 04:20:54,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:54,852 | INFO     | [data] control thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:54,944 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:55,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 21:21:24] 2025-07-07 04:20:55,236 | INFO     | all job control threads have been joined
[2025-07-06 21:21:24] 2025-07-07 04:20:55,355 | INFO     | [payload] failed_post thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:55,458 | INFO     | [data] copytool_in thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:55,686 | INFO     | [data] copytool_out thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:55,762 | INFO     | [payload] control thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:55,970 | INFO     | [job] validate thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:56,115 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:56,163 | INFO     | [payload] validate_post thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:56,241 | INFO     | [job] control thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:56,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 21:21:24] 2025-07-07 04:20:57,618 | INFO     | [job] queue monitor thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:20:59,241 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 21:21:24] 2025-07-07 04:21:00,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878367876928)>', '<ExcThread(monitor, started 139877672802048)>']
[2025-07-06 21:21:24] 2025-07-07 04:21:05,285 | INFO     | all workflow threads have been joined
[2025-07-06 21:21:24] 2025-07-07 04:21:05,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 21:21:24] 2025-07-07 04:21:05,285 | INFO     | traces error code: 0
[2025-07-06 21:21:24] 2025-07-07 04:21:05,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 21:21:24] 2025-07-07 04:21:24,468 | INFO     | PID=1286832 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-06 21:21:24] 2025-07-07 04:21:24,468 | INFO     | .. there are 28 such processes running
[2025-07-06 21:21:24] 2025-07-07 04:21:24,469 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 21:21:24] 2025-07-07 04:21:24,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 21:21:24] 2025-07-07 04:21:24,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 21:21:24] 2025-07-07 04:21:24,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 21:21:24] 2025-07-07 04:21:24,469 | INFO     | [monitor] control thread has ended
[2025-07-06 21:21:24] 2025-07-07 04:21:24,583 [wrapper] ==== pilot stdout END ====
[2025-07-06 21:21:24] 2025-07-07 04:21:24,585 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 21:21:24] 2025-07-07 04:21:24,586 [wrapper] pilotpid: 1286832
[2025-07-06 21:21:24] 2025-07-07 04:21:24,588 [wrapper] Pilot exit status: 0
[2025-07-06 21:21:24] 2025-07-07 04:21:24,595 [wrapper] pandaids: 6721163619
[2025-07-06 21:21:24] 2025-07-07 04:21:24,625 [wrapper] cleanup supervisor_pilot 1286838 1286833
[2025-07-06 21:21:24] 2025-07-07 04:21:24,627 [wrapper] Test setup, not cleaning
[2025-07-06 21:21:24] 2025-07-07 04:21:24,629 [wrapper] apfmon messages muted
[2025-07-06 21:21:24] 2025-07-07 04:21:24,630 [wrapper] ==== wrapper stdout END ====
[2025-07-06 21:21:24] 2025-07-07 04:21:24,632 [wrapper] ==== wrapper stderr END ====
[2025-07-06 21:21:24]  *** Error codes and diagnostics ***
[2025-07-06 21:21:24]     "exeErrorCode": 65,
[2025-07-06 21:21:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 21:21:24]     "pilotErrorCode": 1305,
[2025-07-06 21:21:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 21:21:24]  *** Listing of results directory ***
[2025-07-06 21:21:24] total 312676
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc    530466 Jul  6 19:03 pilot3.tar.gz
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc      5112 Jul  6 19:11 queuedata.json
[2025-07-06 21:21:24] -rwx------. 1 boinc boinc     36292 Jul  6 19:13 runpilot2-wrapper.sh
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc       100 Jul  6 21:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 21:21:24] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 21:18 run_atlas
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc       105 Jul  6 21:18 job.xml
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc      6613 Jul  6 21:18 init_data.xml
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc 316145086 Jul  6 21:18 EVNT.45482060._000563.pool.root.1
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc     15095 Jul  6 21:18 start_atlas.sh
[2025-07-06 21:21:24] drwxrwx--x. 2 boinc boinc      4096 Jul  6 21:18 shared
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc    542886 Jul  6 21:18 input.tar.gz
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc         0 Jul  6 21:18 boinc_lockfile
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc      2533 Jul  6 21:18 pandaJob.out
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc    970025 Jul  6 21:18 agis_schedconf.cvmfs.json
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc   1574083 Jul  6 21:18 agis_ddmendpoints.agis.ALL.json
[2025-07-06 21:21:24] drwx------. 4 boinc boinc      4096 Jul  6 21:18 pilot3
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc       944 Jul  6 21:18 memory_monitor_summary.json
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc       521 Jul  6 21:18 boinc_task_state.xml
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc     20375 Jul  6 21:18 log.45482062._014068.job.log.tgz.1
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc      8344 Jul  6 21:20 heartbeat.json
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc      8192 Jul  6 21:21 boinc_mmap_file
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc        22 Jul  6 21:21 wrapper_checkpoint.txt
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc        95 Jul  6 21:21 pilot_heartbeat.json
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc       823 Jul  6 21:21 pilotlog.txt
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc     73791 Jul  6 21:21 log.45482062._014068.job.log.1
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc       188 Jul  6 21:21 output.list
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc       620 Jul  6 21:21 runtime_log
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc    112640 Jul  6 21:21 result.tar.gz
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc      8650 Jul  6 21:21 runtime_log.err
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc       645 Jul  6 21:21 FLMODmAXqs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmprDLDmeDjfLm.diag
[2025-07-06 21:21:24] -rw-r--r--. 1 boinc boinc     21806 Jul  6 21:21 stderr.txt
[2025-07-06 21:21:24] No HITS result produced
[2025-07-06 21:21:24]  *** Contents of shared directory: ***
[2025-07-06 21:21:24] total 309400
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc 316145086 Jul  6 21:18 ATLAS.root_0
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc     15095 Jul  6 21:18 start_atlas.sh
[2025-07-06 21:21:24] -rw-r--r--. 2 boinc boinc    542886 Jul  6 21:18 input.tar.gz
[2025-07-06 21:21:24] -rw-------. 1 boinc boinc    112640 Jul  6 21:21 result.tar.gz
21:21:26 (1283255): run_atlas exited; CPU time 15.131761
21:21:26 (1283255): called boinc_finish(0)

</stderr_txt>
]]>

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