Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:42:49 (2238879): wrapper (7.7.26015): starting
15:42:49 (2238879): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 15:42:49] Arguments: --nthreads 4
[2025-07-11 15:42:49] Threads: 4
[2025-07-11 15:42:49] Checking for CVMFS
[2025-07-11 15:42:49] No cvmfs_config command found, will try listing directly
[2025-07-11 15:42:49] CVMFS is ok
[2025-07-11 15:42:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 15:42:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 15:42:49] Further information can be found at the LHC@home message board.
[2025-07-11 15:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 15:42:49] Checking for apptainer binary...
[2025-07-11 15:42:49] which: no apptainer in ((null))
[2025-07-11 15:42:49] apptainer is not installed, using version from CVMFS
[2025-07-11 15:42:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 15:42:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-07-11 15:42:49] apptainer works
[2025-07-11 15:42:49] Set ATHENA_PROC_NUMBER=4
[2025-07-11 15:42:49] Set ATHENA_CORE_NUMBER=4
[2025-07-11 15:42:49] Starting ATLAS job with PandaID=6721028389
[2025-07-11 15:42:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:37:25 (2290806): wrapper (7.7.26015): starting
16:37:25 (2290806): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 16:37:25] Arguments: --nthreads 4
[2025-07-11 16:37:25] Threads: 4
[2025-07-11 16:37:25] This job has been restarted, cleaning up previous attempt
[2025-07-11 16:37:25] Checking for CVMFS
[2025-07-11 16:37:25] No cvmfs_config command found, will try listing directly
[2025-07-11 16:37:26] CVMFS is ok
[2025-07-11 16:37:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 16:37:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 16:37:26] Further information can be found at the LHC@home message board.
[2025-07-11 16:37:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 16:37:26] Checking for apptainer binary...
[2025-07-11 16:37:26] which: no apptainer in ((null))
[2025-07-11 16:37:26] apptainer is not installed, using version from CVMFS
[2025-07-11 16:37:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 16:37:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-07-11 16:37:26] apptainer works
[2025-07-11 16:37:26] Set ATHENA_PROC_NUMBER=4
[2025-07-11 16:37:26] Set ATHENA_CORE_NUMBER=4
[2025-07-11 16:37:26] Starting ATLAS job with PandaID=6721028389
[2025-07-11 16:37:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 20:18:36]  *** The last 200 lines of the pilot log: ***
[2025-07-11 20:18:36] 2025-07-11 17:57:28,662 | INFO     | monitor loop #882: job 0:6721028389 is in state 'finished'
[2025-07-11 20:18:36] 2025-07-11 17:57:28,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 20:18:36] 2025-07-11 17:57:29,824 | INFO     | PID=2294985 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-11 20:18:36] 2025-07-11 17:57:29,824 | INFO     | .. there are 2 such processes running
[2025-07-11 20:18:36] 2025-07-11 17:57:31,062 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-11 20:18:36] 2025-07-11 17:57:31,071 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2943.7771406249994
[2025-07-11 20:18:36] 2025-07-11 17:57:31,081 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6721028389/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,082 | INFO     | extracted standard info from prmon json
[2025-07-11 20:18:36] 2025-07-11 17:57:31,082 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 20:18:36] 2025-07-11 17:57:31,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 20:18:36] 2025-07-11 17:57:31,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 20:18:36] 2025-07-11 17:57:31,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 20:18:36] 2025-07-11 17:57:31,086 | INFO     | fitting pss+swap vs Time
[2025-07-11 20:18:36] 2025-07-11 17:57:31,086 | INFO     | sum of square deviations: 2334722845.0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | sum of deviations: -39516777860.50001
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | mean x: 1752250636.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | mean y: 2454041.637755102
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | -- intersect: 29660492170.994495
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | intersect: 29660492170.994495
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | chi2: 1.9057635004632087
[2025-07-11 20:18:36] 2025-07-11 17:57:31,088 | INFO     | sum of square deviations: 2160561440.0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | sum of deviations: -37827392224.00003
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | mean x: 1752250484.0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | mean y: 2455519.890052356
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | -- intersect: 30681086132.20066
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | intersect: 30681086132.20066
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | chi2: 1.9010567761348396
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | current chi2=1.9010567761348396 (change=0.24697315943059878 %)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,090 | INFO     | right removable region: 190
[2025-07-11 20:18:36] 2025-07-11 17:57:31,091 | INFO     | sum of square deviations: 2160561440.0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | sum of deviations: -67563859311.000015
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | mean x: 1752250789.0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | mean y: 2478282.2460732986
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | -- intersect: 54797877104.87098
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | intersect: 54797877104.87098
[2025-07-11 20:18:36] 2025-07-11 17:57:31,092 | INFO     | chi2: 0.38902571559521687
[2025-07-11 20:18:36] 2025-07-11 17:57:31,093 | INFO     | current chi2=0.38902571559521687 (change=79.58688391814297 %)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,093 | INFO     | sum of square deviations: 1995283922.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,094 | INFO     | sum of deviations: -63051469649.99996
[2025-07-11 20:18:36] 2025-07-11 17:57:31,094 | INFO     | mean x: 1752250941.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,094 | INFO     | mean y: 2474101.505376344
[2025-07-11 20:18:36] 2025-07-11 17:57:31,094 | INFO     | -- intersect: 55374040930.321495
[2025-07-11 20:18:36] 2025-07-11 17:57:31,094 | INFO     | intersect: 55374040930.321495
[2025-07-11 20:18:36] 2025-07-11 17:57:31,095 | INFO     | chi2: 0.3862790090498795
[2025-07-11 20:18:36] 2025-07-11 17:57:31,095 | INFO     | current chi2=0.3862790090498795 (change=0.7060475529579991 %)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,095 | INFO     | left removable region: 20
[2025-07-11 20:18:36] 2025-07-11 17:57:31,095 | INFO     | sum of square deviations: 1523386702.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,096 | INFO     | sum of deviations: -43592727405.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,096 | INFO     | mean x: 1752251063.5
[2025-07-11 20:18:36] 2025-07-11 17:57:31,096 | INFO     | mean y: 2458481.970588235
[2025-07-11 20:18:36] 2025-07-11 17:57:31,096 | INFO     | -- intersect: 50144292352.384705
[2025-07-11 20:18:36] 2025-07-11 17:57:31,096 | INFO     | intersect: 50144292352.384705
[2025-07-11 20:18:36] 2025-07-11 17:57:31,097 | INFO     | chi2: 0.34389358878337295
[2025-07-11 20:18:36] 2025-07-11 17:57:31,097 | INFO     | -- intersect: 50144292352.384705
[2025-07-11 20:18:36] 2025-07-11 17:57:31,097 | INFO     | current memory leak: -28.62 B/s (using 170 data points, chi2=0.34)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,097 | INFO     | could have reported an average CPU frequency of 2821 MHz (10 samples)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,097 | INFO     | ..............................
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . Timing measurements:
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . get job = 0 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . initial setup = 1 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . payload setup = 8 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . stage-in = 0 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . payload execution = 11954 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . stage-out = 0 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | . log creation = 0 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,098 | INFO     | ..............................
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | 
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | job summary report
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | --------------------------------------------------
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | PanDA job id: 6721028389
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | task id: 45482062
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | errors: (none)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | pilot state: finished 
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | transexitcode: 0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | exeerrorcode: 0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | exeerrordiag: 
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | exitcode: 0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | exitmsg: OK
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | cpuconsumptiontime: 45573 s
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | nevents: 400
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | neventsw: 0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | pid: 2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | pgrp: 2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:31,188 | INFO     | corecount: 4
[2025-07-11 20:18:36] 2025-07-11 17:57:31,189 | INFO     | event service: False
[2025-07-11 20:18:36] 2025-07-11 17:57:31,189 | INFO     | sizes: {0: 2393504, 5: 2393766, 11: 2393822, 11966: 2423288, 11968: 2432364, 11975: 2432502}
[2025-07-11 20:18:36] 2025-07-11 17:57:31,189 | INFO     | --------------------------------------------------
[2025-07-11 20:18:36] 2025-07-11 17:57:31,189 | INFO     | 
[2025-07-11 20:18:36] 2025-07-11 17:57:31,189 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-07-11 20:18:36] 2025-07-11 17:57:31,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | job 6721028389 has completed (purged errors)
[2025-07-11 20:18:36] 2025-07-11 17:57:31,207 | INFO     | overall cleanup function is called
[2025-07-11 20:18:36] 2025-07-11 17:57:32,214 | INFO     | --- collectZombieJob: --- 10, [2302041]
[2025-07-11 20:18:36] 2025-07-11 17:57:32,215 | INFO     | zombie collector waiting for pid 2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:32,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 20:18:36] 2025-07-11 17:57:32,215 | INFO     | collected zombie processes
[2025-07-11 20:18:36] 2025-07-11 17:57:32,215 | INFO     | will attempt to kill all subprocesses of pid=2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:32,393 | INFO     | process IDs to be killed: [2302041] (in reverse order)
[2025-07-11 20:18:36] 2025-07-11 17:57:32,456 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 20:18:36] 2025-07-11 17:57:32,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 20:18:36] 2025-07-11 17:57:32,467 | INFO     | did not find any defunct processes belonging to 2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:32,476 | INFO     | did not find any defunct processes belonging to 2302041
[2025-07-11 20:18:36] 2025-07-11 17:57:32,477 | INFO     | ready for new job
[2025-07-11 20:18:36] 2025-07-11 17:57:32,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 20:18:36] 2025-07-11 17:57:32,479 | INFO     | ***************************************
[2025-07-11 20:18:36] 2025-07-11 17:57:32,479 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 20:18:36] 2025-07-11 17:57:32,479 | INFO     | ***************************************
[2025-07-11 20:18:36] 2025-07-11 17:57:32,479 | INFO     | 
[2025-07-11 20:18:36] 2025-07-11 17:57:32,484 | INFO     | architecture information:
[2025-07-11 20:18:36] 2025-07-11 17:57:32,484 | INFO     | executing command: cat /etc/os-release
[2025-07-11 20:18:36] 2025-07-11 17:57:32,496 | INFO     | cat /etc/os-release:
[2025-07-11 20:18:36] NAME="CentOS Linux"
[2025-07-11 20:18:36] VERSION="7 (Core)"
[2025-07-11 20:18:36] ID="centos"
[2025-07-11 20:18:36] ID_LIKE="rhel fedora"
[2025-07-11 20:18:36] VERSION_ID="7"
[2025-07-11 20:18:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 20:18:36] ANSI_COLOR="0;31"
[2025-07-11 20:18:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 20:18:36] HOME_URL="https://www.centos.org/"
[2025-07-11 20:18:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 20:18:36] 
[2025-07-11 20:18:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 20:18:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 20:18:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 20:18:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 20:18:36] 
[2025-07-11 20:18:36] 2025-07-11 17:57:32,497 | INFO     | ***************************************
[2025-07-11 20:18:36] 2025-07-11 17:57:32,999 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-07-11 20:18:36] 2025-07-11 17:57:33,011 | INFO     | sufficient remaining disk space (661578055680 B)
[2025-07-11 20:18:36] 2025-07-11 17:57:33,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 20:18:36] 2025-07-11 17:57:33,012 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 20:18:36] 2025-07-11 17:57:33,012 | INFO     | update_server=False
[2025-07-11 20:18:36] 2025-07-11 17:57:33,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 20:18:36] 2025-07-11 17:57:33,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 20:18:36] 2025-07-11 17:57:33,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 20:18:36] 2025-07-11 17:57:33,013 | INFO     | aborting loop
[2025-07-11 20:18:36] 2025-07-11 17:57:33,376 | INFO     | all data control threads have been joined
[2025-07-11 20:18:36] 2025-07-11 17:57:34,017 | INFO     | [job] retrieve thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,018 | INFO     | [job] queue monitor thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,019 | INFO     | [job] job monitor thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,034 | INFO     | [payload] failed_post thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,274 | INFO     | all job control threads have been joined
[2025-07-11 20:18:36] 2025-07-11 17:57:34,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 20:18:36] 2025-07-11 17:57:34,329 | INFO     | all payload control threads have been joined
[2025-07-11 20:18:36] 2025-07-11 17:57:34,382 | INFO     | [data] control thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,461 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 20:18:36] 2025-07-11 17:57:34,618 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:34,746 | INFO     | [job] validate thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,279 | INFO     | [job] control thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,335 | INFO     | [payload] control thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,459 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,473 | INFO     | [data] copytool_in thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:35,478 | INFO     | [payload] validate_post thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:36,318 | INFO     | [data] copytool_out thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:38,619 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 20:18:36] 2025-07-11 17:57:39,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23069101684544)>', '<ExcThread(monitor, started 23068661491456)>']
[2025-07-11 20:18:36] 2025-07-11 17:57:44,571 | INFO     | all workflow threads have been joined
[2025-07-11 20:18:36] 2025-07-11 17:57:44,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 20:18:36] 2025-07-11 17:57:44,571 | INFO     | traces error code: 0
[2025-07-11 20:18:36] 2025-07-11 17:57:44,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 20:18:36] 2025-07-11 17:58:04,180 | INFO     | PID=2294985 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-11 20:18:36] 2025-07-11 17:58:04,180 | INFO     | .. there are 2 such processes running
[2025-07-11 20:18:36] 2025-07-11 17:58:04,180 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 20:18:36] 2025-07-11 17:58:04,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 20:18:36] 2025-07-11 17:58:04,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 20:18:36] 2025-07-11 17:58:04,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 20:18:36] 2025-07-11 17:58:04,181 | INFO     | [monitor] control thread has ended
[2025-07-11 20:18:36] 2025-07-11 17:58:04,309 [wrapper] ==== pilot stdout END ====
[2025-07-11 20:18:36] 2025-07-11 17:58:04,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 20:18:36] 2025-07-11 17:58:04,314 [wrapper] pilotpid: 2294985
[2025-07-11 20:18:36] 2025-07-11 17:58:04,316 [wrapper] Pilot exit status: 0
[2025-07-11 20:18:36] 2025-07-11 17:58:04,323 [wrapper] pandaids: 6721028389 6721028389
[2025-07-11 20:18:36] 2025-07-11 17:58:04,364 [wrapper] cleanup supervisor_pilot 2469330 2294986
[2025-07-11 20:18:36] 2025-07-11 17:58:04,367 [wrapper] Test setup, not cleaning
[2025-07-11 20:18:36] 2025-07-11 17:58:04,369 [wrapper] apfmon messages muted
[2025-07-11 20:18:36] 2025-07-11 17:58:04,370 [wrapper] ==== wrapper stdout END ====
[2025-07-11 20:18:36] 2025-07-11 17:58:04,372 [wrapper] ==== wrapper stderr END ====
[2025-07-11 20:18:36]  *** Error codes and diagnostics ***
[2025-07-11 20:18:36]     "exeErrorCode": 0,
[2025-07-11 20:18:36]     "exeErrorDiag": "",
[2025-07-11 20:18:36]     "pilotErrorCode": 0,
[2025-07-11 20:18:36]     "pilotErrorDiag": "",
[2025-07-11 20:18:36]  *** Listing of results directory ***
[2025-07-11 20:18:36] total 882456
[2025-07-11 20:18:36] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc    530466 Jul  6 23:19 pilot3.tar.gz
[2025-07-11 20:18:36] -rwx------ 1 boinc boinc     36292 Jul  6 23:28 runpilot2-wrapper.sh
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc      5112 Jul  6 23:28 queuedata.json
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc       100 Jul 11 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 20:18:36] -rwxr-xr-x 1 boinc boinc      7986 Jul 11 15:28 run_atlas
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc       105 Jul 11 15:28 job.xml
[2025-07-11 20:18:36] -rw-r--r-- 3 boinc boinc 319299852 Jul 11 15:42 EVNT.45482060._000454.pool.root.1
[2025-07-11 20:18:36] -rw-r--r-- 3 boinc boinc 319299852 Jul 11 15:42 ATLAS.root_0
[2025-07-11 20:18:36] -rw-r--r-- 2 boinc boinc    542884 Jul 11 15:42 input.tar.gz
[2025-07-11 20:18:36] -rw-r--r-- 2 boinc boinc     15095 Jul 11 15:42 start_atlas.sh
[2025-07-11 20:18:36] drwxrwx--x 2 boinc boinc      4096 Jul 11 15:42 shared
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc         0 Jul 11 15:42 boinc_lockfile
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc      2534 Jul 11 16:37 pandaJob.out
[2025-07-11 20:18:36] -rw------- 1 boinc boinc    976939 Jul 11 16:37 agis_schedconf.cvmfs.json
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc      6641 Jul 11 16:40 init_data.xml
[2025-07-11 20:18:36] -rw------- 1 boinc boinc 258330836 Jul 11 19:56 HITS.45482062._011344.pool.root.1
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc       531 Jul 11 19:56 boinc_task_state.xml
[2025-07-11 20:18:36] -rw------- 1 boinc boinc      1043 Jul 11 19:57 memory_monitor_summary.json
[2025-07-11 20:18:36] -rw------- 1 boinc boinc   1588641 Jul 11 19:57 agis_ddmendpoints.agis.ALL.json
[2025-07-11 20:18:36] -rw------- 1 boinc boinc    319040 Jul 11 19:57 log.45482062._011344.job.log.tgz.1
[2025-07-11 20:18:36] -rw------- 1 boinc boinc      7837 Jul 11 19:57 heartbeat.json
[2025-07-11 20:18:36] -rw------- 1 boinc boinc        97 Jul 11 19:58 pilot_heartbeat.json
[2025-07-11 20:18:36] -rw------- 1 boinc boinc       822 Jul 11 19:58 pilotlog.txt
[2025-07-11 20:18:36] -rw------- 1 boinc boinc   1092589 Jul 11 19:58 log.45482062._011344.job.log.1
[2025-07-11 20:18:36] -rw------- 1 boinc boinc       357 Jul 11 19:58 output.list
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc       620 Jul 11 19:58 runtime_log
[2025-07-11 20:18:36] -rw------- 1 boinc boinc   1433600 Jul 11 19:58 result.tar.gz
[2025-07-11 20:18:36] -rw------- 1 boinc boinc       790 Jul 11 19:58 vRMODmq5ls7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvMDLDmIsbFmn.diag
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc      9104 Jul 11 19:58 runtime_log.err
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc        27 Jul 11 20:18 wrapper_checkpoint.txt
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc      8192 Jul 11 20:18 boinc_mmap_file
[2025-07-11 20:18:36] -rw-r--r-- 1 boinc boinc     22927 Jul 11 20:18 stderr.txt
[2025-07-11 20:18:36] HITS file was successfully produced:
[2025-07-11 20:18:36] -rw------- 1 boinc boinc 258330836 Jul 11 19:56 shared/HITS.pool.root.1
[2025-07-11 20:18:36]  *** Contents of shared directory: ***
[2025-07-11 20:18:36] total 566056
[2025-07-11 20:18:36] -rw-r--r-- 3 boinc boinc 319299852 Jul 11 15:42 ATLAS.root_0
[2025-07-11 20:18:36] -rw-r--r-- 2 boinc boinc    542884 Jul 11 15:42 input.tar.gz
[2025-07-11 20:18:36] -rw-r--r-- 2 boinc boinc     15095 Jul 11 15:42 start_atlas.sh
[2025-07-11 20:18:36] -rw------- 1 boinc boinc 258330836 Jul 11 19:56 HITS.pool.root.1
[2025-07-11 20:18:36] -rw------- 1 boinc boinc   1433600 Jul 11 19:58 result.tar.gz
20:18:38 (2290806): run_atlas exited; CPU time 45995.702086
20:18:38 (2290806): called boinc_finish(0)

</stderr_txt>
]]>

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