Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:13 (1333648): wrapper (7.7.26015): starting
17:31:13 (1333648): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 17:31:13] Arguments: --nthreads 12
[2025-07-06 17:31:13] Threads: 12
[2025-07-06 17:31:13] Checking for CVMFS
[2025-07-06 17:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 17:31:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 17:31:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 17:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 17:31:14] 2.11.5.0 6647 7624 223568 148023 1 267 26606291 45568000 14150 130560 0 75764303 99.789 45857693 30572 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 17:31:14] CVMFS is ok
[2025-07-06 17:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 17:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 17:31:14] Further information can be found at the LHC@home message board.
[2025-07-06 17:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 17:31:14] Checking for apptainer binary...
[2025-07-06 17:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 17:31:14] Running /usr/bin/apptainer --version
[2025-07-06 17:31:14] apptainer version 1.4.1-1.el9
[2025-07-06 17:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 17:31:14] wns0055.triumf.lcg
[2025-07-06 17:31:14] apptainer works
[2025-07-06 17:31:14] Set ATHENA_PROC_NUMBER=12
[2025-07-06 17:31:14] Set ATHENA_CORE_NUMBER=12
[2025-07-06 17:31:14] Starting ATLAS job with PandaID=6720848799
[2025-07-06 17:31:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 17:34:17]  *** The last 200 lines of the pilot log: ***
[2025-07-06 17:34:17] 2025-07-07 00:34:03,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | found no stored workdir sizes
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | wrong length of table data, x=[1751848309.0], y=[1974.0] (must be same and length>=4)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . Timing measurements:
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . get job = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . initial setup = 2 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload setup = 5 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-in = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload execution = 14 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-out = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . log creation = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720848799/pilotlog.txt
[2025-07-06 17:34:17] 2025-07-07 00:34:03,048 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 17:34:17] - Log from pilotlog.txt -
[2025-07-06 17:34:17] 2025-07-07 00:34:03,035 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 17:34:17] 2025-07-07 00:34:03,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | found no stored workdir sizes
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | wrong length of table data, x=[1751848309.0], y=[1974.0] (must be same and length>=4)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . Timing measurements:
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . get job = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . initial setup = 2 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload setup = 5 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-in = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload execution = 14 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-out = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . log creation = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720848799/pilotlog.txt
[2025-07-06 17:34:17] 2025-07-07 00:34:03,048 | WARNING  | 
[2025-07-06 17:34:17] [begin log extracts]
[2025-07-06 17:34:17] - Log from pilotlog.txt -
[2025-07-06 17:34:17] 2025-07-07 00:34:03,035 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 17:34:17] 2025-07-07 00:34:03,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | found no stored workdir sizes
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | INFO     | will not add max space = 0 B to job metrics
[2025-07-06 17:34:17] 2025-07-07 00:34:03,036 | WARNING  | wrong length of table data, x=[1751848309.0], y=[1974.0] (must be same and length>=4)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . Timing measurements:
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . get job = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . initial setup = 2 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload setup = 5 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-in = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . payload execution = 14 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . stage-out = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | . log creation = 0 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,037 | INFO     | ..............................
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 17:34:17] 2025-07-07 00:34:03,038 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720848799/pilotlog.txt
[2025-07-06 17:34:17] [end log extracts]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,048 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,049 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | 
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | job summary report
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | --------------------------------------------------
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | PanDA job id: 6720848799
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | task id: 45482148
[2025-07-06 17:34:17] 2025-07-07 00:34:03,117 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 17:31:56,066 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | pilot state: failed 
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | transexitcode: 65
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | exeerrorcode: 65
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | exitcode: 65
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | cpuconsumptiontime: 15 s
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | nevents: 0
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | neventsw: 0
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | pid: 1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | pgrp: 1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | corecount: 12
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | event service: False
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | sizes: {0: 2366637, 5: 2366899, 11: 2366955, 22: 2390181, 24: 2394501, 142: 2394639}
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | --------------------------------------------------
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | 
[2025-07-06 17:34:17] 2025-07-07 00:34:03,118 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 17:34:17] 2025-07-07 00:34:03,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 17:34:17] 2025-07-07 00:34:03,133 | INFO     | job 6720848799 has completed (purged errors)
[2025-07-06 17:34:17] 2025-07-07 00:34:03,134 | INFO     | overall cleanup function is called
[2025-07-06 17:34:17] 2025-07-07 00:34:04,140 | INFO     | --- collectZombieJob: --- 10, [1343517]
[2025-07-06 17:34:17] 2025-07-07 00:34:04,140 | INFO     | zombie collector waiting for pid 1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:04,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 17:34:17] 2025-07-07 00:34:04,140 | INFO     | collected zombie processes
[2025-07-06 17:34:17] 2025-07-07 00:34:04,140 | INFO     | will attempt to kill all subprocesses of pid=1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:04,292 | INFO     | process IDs to be killed: [1343517] (in reverse order)
[2025-07-06 17:34:17] 2025-07-07 00:34:04,351 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 17:34:17] 2025-07-07 00:34:04,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 17:34:17] 2025-07-07 00:34:04,358 | INFO     | did not find any defunct processes belonging to 1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:04,364 | INFO     | did not find any defunct processes belonging to 1343517
[2025-07-06 17:34:17] 2025-07-07 00:34:04,364 | INFO     | ready for new job
[2025-07-06 17:34:17] 2025-07-07 00:34:04,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 17:34:17] 2025-07-07 00:34:04,365 | INFO     | ***************************************
[2025-07-06 17:34:17] 2025-07-07 00:34:04,366 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 17:34:17] 2025-07-07 00:34:04,366 | INFO     | ***************************************
[2025-07-06 17:34:17] 2025-07-07 00:34:04,366 | INFO     | 
[2025-07-06 17:34:17] 2025-07-07 00:34:04,367 | INFO     | architecture information:
[2025-07-06 17:34:17] 2025-07-07 00:34:04,368 | INFO     | executing command: cat /etc/os-release
[2025-07-06 17:34:17] 2025-07-07 00:34:04,377 | INFO     | cat /etc/os-release:
[2025-07-06 17:34:17] NAME="CentOS Linux"
[2025-07-06 17:34:17] VERSION="7 (Core)"
[2025-07-06 17:34:17] ID="centos"
[2025-07-06 17:34:17] ID_LIKE="rhel fedora"
[2025-07-06 17:34:17] VERSION_ID="7"
[2025-07-06 17:34:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 17:34:17] ANSI_COLOR="0;31"
[2025-07-06 17:34:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 17:34:17] HOME_URL="https://www.centos.org/"
[2025-07-06 17:34:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 17:34:17] 
[2025-07-06 17:34:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 17:34:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 17:34:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 17:34:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 17:34:17] 
[2025-07-06 17:34:17] 2025-07-07 00:34:04,377 | INFO     | ***************************************
[2025-07-06 17:34:17] 2025-07-07 00:34:04,880 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 17:34:17] 2025-07-07 00:34:04,891 | INFO     | sufficient remaining disk space (1802089005056 B)
[2025-07-06 17:34:17] 2025-07-07 00:34:04,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 17:34:17] 2025-07-07 00:34:04,891 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 17:34:17] 2025-07-07 00:34:04,891 | INFO     | update_server=False
[2025-07-06 17:34:17] 2025-07-07 00:34:04,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | INFO     | aborting loop
[2025-07-06 17:34:17] 2025-07-07 00:34:04,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 17:34:17] 2025-07-07 00:34:04,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 17:34:17] 2025-07-07 00:34:05,272 | INFO     | all payload control threads have been joined
[2025-07-06 17:34:17] 2025-07-07 00:34:05,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 17:34:17] 2025-07-07 00:34:05,751 | INFO     | all data control threads have been joined
[2025-07-06 17:34:17] 2025-07-07 00:34:05,896 | INFO     | [job] retrieve thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:05,897 | INFO     | [job] queue monitor thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:05,898 | INFO     | [job] job monitor thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,160 | INFO     | all job control threads have been joined
[2025-07-06 17:34:17] 2025-07-07 00:34:06,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,174 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,277 | INFO     | [payload] control thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,348 | INFO     | [data] copytool_in thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,351 | INFO     | [job] validate thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,384 | INFO     | [payload] failed_post thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,468 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,600 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,749 | INFO     | [payload] validate_post thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:06,756 | INFO     | [data] control thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:07,165 | INFO     | [job] control thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:07,334 | INFO     | [data] copytool_out thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:07,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 17:34:17] 2025-07-07 00:34:11,839 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 17:34:17] 2025-07-07 00:34:12,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591749560128)>', '<ExcThread(monitor, started 140591341999872)>']
[2025-07-06 17:34:17] 2025-07-07 00:34:12,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 17:34:17] 2025-07-07 00:34:12,931 | INFO     | [monitor] control thread has ended
[2025-07-06 17:34:17] 2025-07-07 00:34:17,349 | INFO     | all workflow threads have been joined
[2025-07-06 17:34:17] 2025-07-07 00:34:17,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 17:34:17] 2025-07-07 00:34:17,349 | INFO     | traces error code: 0
[2025-07-06 17:34:17] 2025-07-07 00:34:17,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 17:34:17] 2025-07-07 00:34:17,475 [wrapper] ==== pilot stdout END ====
[2025-07-06 17:34:17] 2025-07-07 00:34:17,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 17:34:17] 2025-07-07 00:34:17,478 [wrapper] pilotpid: 1337210
[2025-07-06 17:34:17] 2025-07-07 00:34:17,480 [wrapper] Pilot exit status: 0
[2025-07-06 17:34:17] 2025-07-07 00:34:17,486 [wrapper] pandaids: 6720848799
[2025-07-06 17:34:17] 2025-07-07 00:34:17,523 [wrapper] cleanup supervisor_pilot 1337216 1337211
[2025-07-06 17:34:17] 2025-07-07 00:34:17,525 [wrapper] Test setup, not cleaning
[2025-07-06 17:34:17] 2025-07-07 00:34:17,527 [wrapper] apfmon messages muted
[2025-07-06 17:34:17] 2025-07-07 00:34:17,529 [wrapper] ==== wrapper stdout END ====
[2025-07-06 17:34:17] 2025-07-07 00:34:17,530 [wrapper] ==== wrapper stderr END ====
[2025-07-06 17:34:17]  *** Error codes and diagnostics ***
[2025-07-06 17:34:17]     "exeErrorCode": 65,
[2025-07-06 17:34:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 17:34:17]     "pilotErrorCode": 1305,
[2025-07-06 17:34:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 17:34:17]  *** Listing of results directory ***
[2025-07-06 17:34:17] total 319776
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc    530466 Jul  6 09:03 pilot3.tar.gz
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc      5112 Jul  6 09:11 queuedata.json
[2025-07-06 17:34:17] -rwx------. 1 boinc boinc     36292 Jul  6 09:11 runpilot2-wrapper.sh
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc       100 Jul  6 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 17:34:17] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 17:31 run_atlas
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc       105 Jul  6 17:31 job.xml
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc      6597 Jul  6 17:31 init_data.xml
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc 323408513 Jul  6 17:31 EVNT.45482146._000450.pool.root.1
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc     15095 Jul  6 17:31 start_atlas.sh
[2025-07-06 17:34:17] drwxrwx--x. 2 boinc boinc      4096 Jul  6 17:31 shared
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc    542909 Jul  6 17:31 input.tar.gz
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc         0 Jul  6 17:31 boinc_lockfile
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc      2617 Jul  6 17:31 pandaJob.out
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc    970017 Jul  6 17:31 agis_schedconf.cvmfs.json
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc   1574083 Jul  6 17:31 agis_ddmendpoints.agis.ALL.json
[2025-07-06 17:34:17] drwx------. 4 boinc boinc      4096 Jul  6 17:31 pilot3
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc       521 Jul  6 17:31 boinc_task_state.xml
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc       953 Jul  6 17:32 memory_monitor_summary.json
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc     20237 Jul  6 17:32 log.45482148._011255.job.log.tgz.1
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc        95 Jul  6 17:33 pilot_heartbeat.json
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc      8388 Jul  6 17:34 heartbeat.json
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc      8192 Jul  6 17:34 boinc_mmap_file
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc        22 Jul  6 17:34 wrapper_checkpoint.txt
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc      4479 Jul  6 17:34 pilotlog.txt
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc     73932 Jul  6 17:34 log.45482148._011255.job.log.1
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc       188 Jul  6 17:34 output.list
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc       620 Jul  6 17:34 runtime_log
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc    112640 Jul  6 17:34 result.tar.gz
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc      8485 Jul  6 17:34 runtime_log.err
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc       644 Jul  6 17:34 2dxMDmT8gs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyyCLDmIkcfFn.diag
[2025-07-06 17:34:17] -rw-r--r--. 1 boinc boinc     21548 Jul  6 17:34 stderr.txt
[2025-07-06 17:34:17] No HITS result produced
[2025-07-06 17:34:17]  *** Contents of shared directory: ***
[2025-07-06 17:34:17] total 316496
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc 323408513 Jul  6 17:31 ATLAS.root_0
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc     15095 Jul  6 17:31 start_atlas.sh
[2025-07-06 17:34:17] -rw-r--r--. 2 boinc boinc    542909 Jul  6 17:31 input.tar.gz
[2025-07-06 17:34:17] -rw-------. 1 boinc boinc    112640 Jul  6 17:34 result.tar.gz
17:34:18 (1333648): run_atlas exited; CPU time 18.789042
17:34:18 (1333648): called boinc_finish(0)

</stderr_txt>
]]>

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