Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:30:19 (1518197): wrapper (7.7.26015): starting
15:30:19 (1518197): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 15:30:19] Arguments: --nthreads 12
[2025-07-06 15:30:19] Threads: 12
[2025-07-06 15:30:19] Checking for CVMFS
[2025-07-06 15:30:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 15:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 15:30:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 15:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 15:30:21] 2.11.5.0 12433 7353 225848 148021 1 18 45010912 45568000 14803 130560 0 42307186 99.697 30202754 23796 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 15:30:21] CVMFS is ok
[2025-07-06 15:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 15:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 15:30:21] Further information can be found at the LHC@home message board.
[2025-07-06 15:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 15:30:21] Checking for apptainer binary...
[2025-07-06 15:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 15:30:21] Running /usr/bin/apptainer --version
[2025-07-06 15:30:21] apptainer version 1.4.1-1.el9
[2025-07-06 15:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 15:30:21] wns0128.triumf.lcg
[2025-07-06 15:30:21] apptainer works
[2025-07-06 15:30:21] Set ATHENA_PROC_NUMBER=12
[2025-07-06 15:30:21] Set ATHENA_CORE_NUMBER=12
[2025-07-06 15:30:21] Starting ATLAS job with PandaID=6720908389
[2025-07-06 15:30:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 15:35:11]  *** The last 200 lines of the pilot log: ***
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | WARNING  | wrong length of table data, x=[1751841127.0], y=[1984.0] (must be same and length>=4)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . Timing measurements:
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . get job = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . initial setup = 4 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload setup = 19 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-in = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload execution = 37 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-out = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . log creation = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720908389/pilotlog.txt
[2025-07-06 15:35:12] 2025-07-06 22:34:39,788 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 15:35:12] - Log from pilotlog.txt -
[2025-07-06 15:35:12] 2025-07-06 22:34:39,750 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720908389/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | INFO     | extracted standard info from prmon json
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | WARNING  | wrong length of table data, x=[1751841127.0], y=[1984.0] (must be same and length>=4)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . Timing measurements:
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . get job = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . initial setup = 4 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload setup = 19 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-in = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload execution = 37 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-out = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . log creation = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720908389/pilotlog.txt
[2025-07-06 15:35:12] 2025-07-06 22:34:39,788 | WARNING  | 
[2025-07-06 15:35:12] [begin log extracts]
[2025-07-06 15:35:12] - Log from pilotlog.txt -
[2025-07-06 15:35:12] 2025-07-06 22:34:39,750 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720908389/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | INFO     | extracted standard info from prmon json
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 15:35:12] 2025-07-06 22:34:39,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | WARNING  | wrong length of table data, x=[1751841127.0], y=[1984.0] (must be same and length>=4)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . Timing measurements:
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . get job = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,752 | INFO     | . initial setup = 4 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload setup = 19 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-in = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . payload execution = 37 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . stage-out = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | . log creation = 0 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | ..............................
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 15:35:12] 2025-07-06 22:34:39,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720908389/pilotlog.txt
[2025-07-06 15:35:12] [end log extracts]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,789 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,789 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 15:35:12] 2025-07-06 22:34:39,862 | INFO     | 
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | job summary report
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | --------------------------------------------------
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | PanDA job id: 6720908389
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | task id: 45482040
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 15:32:25,717 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | pilot state: failed 
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | transexitcode: 65
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | exeerrorcode: 65
[2025-07-06 15:35:12] 2025-07-06 22:34:39,863 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | exitcode: 65
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | cpuconsumptiontime: 19 s
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | nevents: 0
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | neventsw: 0
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | pid: 1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | pgrp: 1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | corecount: 12
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | event service: False
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | sizes: {0: 2366562, 11: 2366562, 13: 2366852, 22: 2366908, 60: 2390316, 62: 2394764, 185: 2394902}
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | --------------------------------------------------
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | 
[2025-07-06 15:35:12] 2025-07-06 22:34:39,864 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 15:35:12] 2025-07-06 22:34:39,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | job 6720908389 has completed (purged errors)
[2025-07-06 15:35:12] 2025-07-06 22:34:39,974 | INFO     | overall cleanup function is called
[2025-07-06 15:35:12] 2025-07-06 22:34:41,028 | INFO     | --- collectZombieJob: --- 10, [1528157]
[2025-07-06 15:35:12] 2025-07-06 22:34:41,029 | INFO     | zombie collector waiting for pid 1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:41,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 15:35:12] 2025-07-06 22:34:41,029 | INFO     | collected zombie processes
[2025-07-06 15:35:12] 2025-07-06 22:34:41,029 | INFO     | will attempt to kill all subprocesses of pid=1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:41,302 | INFO     | process IDs to be killed: [1528157] (in reverse order)
[2025-07-06 15:35:12] 2025-07-06 22:34:41,412 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 15:35:12] 2025-07-06 22:34:41,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 15:35:12] 2025-07-06 22:34:41,445 | INFO     | did not find any defunct processes belonging to 1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:41,456 | INFO     | did not find any defunct processes belonging to 1528157
[2025-07-06 15:35:12] 2025-07-06 22:34:41,457 | INFO     | ready for new job
[2025-07-06 15:35:12] 2025-07-06 22:34:41,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 15:35:12] 2025-07-06 22:34:41,459 | INFO     | ***************************************
[2025-07-06 15:35:12] 2025-07-06 22:34:41,459 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 15:35:12] 2025-07-06 22:34:41,459 | INFO     | ***************************************
[2025-07-06 15:35:12] 2025-07-06 22:34:41,459 | INFO     | 
[2025-07-06 15:35:12] 2025-07-06 22:34:41,461 | INFO     | architecture information:
[2025-07-06 15:35:12] 2025-07-06 22:34:41,462 | INFO     | executing command: cat /etc/os-release
[2025-07-06 15:35:12] 2025-07-06 22:34:41,494 | INFO     | cat /etc/os-release:
[2025-07-06 15:35:12] NAME="CentOS Linux"
[2025-07-06 15:35:12] VERSION="7 (Core)"
[2025-07-06 15:35:12] ID="centos"
[2025-07-06 15:35:12] ID_LIKE="rhel fedora"
[2025-07-06 15:35:12] VERSION_ID="7"
[2025-07-06 15:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 15:35:12] ANSI_COLOR="0;31"
[2025-07-06 15:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 15:35:12] HOME_URL="https://www.centos.org/"
[2025-07-06 15:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 15:35:12] 
[2025-07-06 15:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 15:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 15:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 15:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 15:35:12] 
[2025-07-06 15:35:12] 2025-07-06 22:34:41,494 | INFO     | ***************************************
[2025-07-06 15:35:12] 2025-07-06 22:34:41,999 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 15:35:12] 2025-07-06 22:34:42,017 | INFO     | sufficient remaining disk space (1784492851200 B)
[2025-07-06 15:35:12] 2025-07-06 22:34:42,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 15:35:12] 2025-07-06 22:34:42,017 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 15:35:12] 2025-07-06 22:34:42,018 | INFO     | update_server=False
[2025-07-06 15:35:12] 2025-07-06 22:34:42,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 15:35:12] 2025-07-06 22:34:42,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 15:35:12] 2025-07-06 22:34:42,018 | INFO     | aborting loop
[2025-07-06 15:35:12] 2025-07-06 22:34:42,047 | INFO     | all payload control threads have been joined
[2025-07-06 15:35:12] 2025-07-06 22:34:42,198 | INFO     | all job control threads have been joined
[2025-07-06 15:35:12] 2025-07-06 22:34:42,296 | INFO     | all data control threads have been joined
[2025-07-06 15:35:12] 2025-07-06 22:34:42,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 15:35:12] 2025-07-06 22:34:43,025 | INFO     | [job] retrieve thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,026 | INFO     | [job] job monitor thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,053 | INFO     | [payload] control thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,204 | INFO     | [job] control thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,228 | INFO     | [data] copytool_in thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,302 | INFO     | [data] control thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,609 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,610 | INFO     | [job] validate thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:43,635 | INFO     | [payload] validate_post thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:44,089 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:44,141 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:44,316 | INFO     | [payload] failed_post thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:44,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 15:35:12] 2025-07-06 22:34:44,407 | INFO     | [data] copytool_out thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:44,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 15:35:12] 2025-07-06 22:34:45,893 | INFO     | [job] queue monitor thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:48,414 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 15:35:12] 2025-07-06 22:34:49,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655074105152)>', '<ExcThread(monitor, started 139654527436544)>']
[2025-07-06 15:35:12] 2025-07-06 22:34:54,561 | INFO     | all workflow threads have been joined
[2025-07-06 15:35:12] 2025-07-06 22:34:54,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 15:35:12] 2025-07-06 22:34:54,563 | INFO     | traces error code: 0
[2025-07-06 15:35:12] 2025-07-06 22:34:54,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 15:35:12] 2025-07-06 22:35:11,724 | INFO     | PID=1521785 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-06 15:35:12] 2025-07-06 22:35:11,725 | INFO     | .. there are 20 such processes running
[2025-07-06 15:35:12] 2025-07-06 22:35:11,725 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 15:35:12] 2025-07-06 22:35:11,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 15:35:12] 2025-07-06 22:35:11,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 15:35:12] 2025-07-06 22:35:11,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 15:35:12] 2025-07-06 22:35:11,726 | INFO     | [monitor] control thread has ended
[2025-07-06 15:35:12] 2025-07-06 22:35:11,850 [wrapper] ==== pilot stdout END ====
[2025-07-06 15:35:12] 2025-07-06 22:35:11,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 15:35:12] 2025-07-06 22:35:11,854 [wrapper] pilotpid: 1521785
[2025-07-06 15:35:12] 2025-07-06 22:35:11,856 [wrapper] Pilot exit status: 0
[2025-07-06 15:35:12] 2025-07-06 22:35:11,866 [wrapper] pandaids: 6720908389
[2025-07-06 15:35:12] 2025-07-06 22:35:11,913 [wrapper] cleanup supervisor_pilot 1521791 1521786
[2025-07-06 15:35:12] 2025-07-06 22:35:11,915 [wrapper] Test setup, not cleaning
[2025-07-06 15:35:12] 2025-07-06 22:35:11,918 [wrapper] apfmon messages muted
[2025-07-06 15:35:12] 2025-07-06 22:35:11,920 [wrapper] ==== wrapper stdout END ====
[2025-07-06 15:35:12] 2025-07-06 22:35:11,922 [wrapper] ==== wrapper stderr END ====
[2025-07-06 15:35:12]  *** Error codes and diagnostics ***
[2025-07-06 15:35:12]     "exeErrorCode": 65,
[2025-07-06 15:35:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 15:35:12]     "pilotErrorCode": 1305,
[2025-07-06 15:35:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 15:35:12]  *** Listing of results directory ***
[2025-07-06 15:35:12] total 312360
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc    530466 Jul  6 10:57 pilot3.tar.gz
[2025-07-06 15:35:12] -rwx------. 1 boinc boinc     36292 Jul  6 11:45 runpilot2-wrapper.sh
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc      5112 Jul  6 11:45 queuedata.json
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc       100 Jul  6 15:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 15:35:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 15:30 run_atlas
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc       105 Jul  6 15:30 job.xml
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc      6593 Jul  6 15:30 init_data.xml
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc 315804267 Jul  6 15:30 EVNT.45482038._000285.pool.root.1
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc     15095 Jul  6 15:30 start_atlas.sh
[2025-07-06 15:35:12] drwxrwx--x. 2 boinc boinc      4096 Jul  6 15:30 shared
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc    542883 Jul  6 15:30 input.tar.gz
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc         0 Jul  6 15:30 boinc_lockfile
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc      2544 Jul  6 15:30 pandaJob.out
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc    970017 Jul  6 15:30 agis_schedconf.cvmfs.json
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc   1574083 Jul  6 15:30 agis_ddmendpoints.agis.ALL.json
[2025-07-06 15:35:12] drwx------. 4 boinc boinc      4096 Jul  6 15:30 pilot3
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc       524 Jul  6 15:32 boinc_task_state.xml
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc       973 Jul  6 15:32 memory_monitor_summary.json
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc     21600 Jul  6 15:32 log.45482040._007122.job.log.tgz.1
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc      8392 Jul  6 15:34 heartbeat.json
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc      8192 Jul  6 15:35 boinc_mmap_file
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc        23 Jul  6 15:35 wrapper_checkpoint.txt
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc        95 Jul  6 15:35 pilot_heartbeat.json
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc       823 Jul  6 15:35 pilotlog.txt
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc     79321 Jul  6 15:35 log.45482040._007122.job.log.1
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc       188 Jul  6 15:35 output.list
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc       620 Jul  6 15:35 runtime_log
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc    122880 Jul  6 15:35 result.tar.gz
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc      8485 Jul  6 15:35 runtime_log.err
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc       647 Jul  6 15:35 oA0NDmUXjs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm48CLDmtJTSnn.diag
[2025-07-06 15:35:12] -rw-r--r--. 1 boinc boinc     21789 Jul  6 15:35 stderr.txt
[2025-07-06 15:35:12] No HITS result produced
[2025-07-06 15:35:12]  *** Contents of shared directory: ***
[2025-07-06 15:35:12] total 309076
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc 315804267 Jul  6 15:30 ATLAS.root_0
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc     15095 Jul  6 15:30 start_atlas.sh
[2025-07-06 15:35:12] -rw-r--r--. 2 boinc boinc    542883 Jul  6 15:30 input.tar.gz
[2025-07-06 15:35:12] -rw-------. 1 boinc boinc    122880 Jul  6 15:35 result.tar.gz
15:35:13 (1518197): run_atlas exited; CPU time 28.415381
15:35:13 (1518197): called boinc_finish(0)

</stderr_txt>
]]>

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