Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:24 (539021): wrapper (7.7.26015): starting
03:02:24 (539021): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 03:02:24] Arguments: --nthreads 12
[2025-07-06 03:02:24] Threads: 12
[2025-07-06 03:02:24] Checking for CVMFS
[2025-07-06 03:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 03:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 03:02:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 03:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 03:02:24] 2.11.5.0 2427 6823 225828 147999 0 236 31431555 45568001 25068 130560 0 56574779 99.811 30470699 34624 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 03:02:24] CVMFS is ok
[2025-07-06 03:02:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 03:02:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 03:02:25] Further information can be found at the LHC@home message board.
[2025-07-06 03:02:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 03:02:25] Checking for apptainer binary...
[2025-07-06 03:02:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 03:02:25] Running /usr/bin/apptainer --version
[2025-07-06 03:02:25] apptainer version 1.4.1-1.el9
[2025-07-06 03:02:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 03:02:25] wns0026.triumf.lcg
[2025-07-06 03:02:25] apptainer works
[2025-07-06 03:02:25] Set ATHENA_PROC_NUMBER=12
[2025-07-06 03:02:25] Set ATHENA_CORE_NUMBER=12
[2025-07-06 03:02:25] Starting ATLAS job with PandaID=6720716489
[2025-07-06 03:02:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 03:07:14]  *** The last 200 lines of the pilot log: ***
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | WARNING  | wrong length of table data, x=[1751796241.0], y=[2513.0] (must be same and length>=4)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . Timing measurements:
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . get job = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . initial setup = 4 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload setup = 14 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-in = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload execution = 28 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-out = 1 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | . log creation = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720716489/pilotlog.txt
[2025-07-06 03:07:14] 2025-07-06 10:06:39,388 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 03:07:14] - Log from pilotlog.txt -
[2025-07-06 03:07:14] 2025-07-06 10:06:39,372 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720716489/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | INFO     | extracted standard info from prmon json
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | WARNING  | wrong length of table data, x=[1751796241.0], y=[2513.0] (must be same and length>=4)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . Timing measurements:
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . get job = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . initial setup = 4 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload setup = 14 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-in = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload execution = 28 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-out = 1 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | . log creation = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720716489/pilotlog.txt
[2025-07-06 03:07:14] 2025-07-06 10:06:39,388 | WARNING  | 
[2025-07-06 03:07:14] [begin log extracts]
[2025-07-06 03:07:14] - Log from pilotlog.txt -
[2025-07-06 03:07:14] 2025-07-06 10:06:39,372 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720716489/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | INFO     | extracted standard info from prmon json
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 03:07:14] 2025-07-06 10:06:39,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | WARNING  | wrong length of table data, x=[1751796241.0], y=[2513.0] (must be same and length>=4)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . Timing measurements:
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . get job = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . initial setup = 4 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload setup = 14 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-in = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . payload execution = 28 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,374 | INFO     | . stage-out = 1 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | . log creation = 0 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | ..............................
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 03:07:14] 2025-07-06 10:06:39,375 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720716489/pilotlog.txt
[2025-07-06 03:07:14] [end log extracts]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,388 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,389 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 03:07:14] 2025-07-06 10:06:39,444 | INFO     | 
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | job summary report
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | --------------------------------------------------
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | PanDA job id: 6720716489
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | task id: 45482137
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 03:04:14,580 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | pilot state: failed 
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | transexitcode: 65
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | exeerrorcode: 65
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | exitcode: 65
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | cpuconsumptiontime: 15 s
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | nevents: 0
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | neventsw: 0
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | pid: 548954
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | pgrp: 548954
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | corecount: 12
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | event service: False
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | sizes: {0: 2366560, 11: 2366560, 15: 2366850, 22: 2366878, 46: 2390133, 48: 2394425, 51: 2394581, 182: 2394747}
[2025-07-06 03:07:14] 2025-07-06 10:06:39,445 | INFO     | --------------------------------------------------
[2025-07-06 03:07:14] 2025-07-06 10:06:39,446 | INFO     | 
[2025-07-06 03:07:14] 2025-07-06 10:06:39,446 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 03:07:14] 2025-07-06 10:06:39,465 | INFO     | job 6720716489 has completed (purged errors)
[2025-07-06 03:07:14] 2025-07-06 10:06:39,465 | INFO     | overall cleanup function is called
[2025-07-06 03:07:14] 2025-07-06 10:06:40,471 | INFO     | --- collectZombieJob: --- 10, [548954]
[2025-07-06 03:07:14] 2025-07-06 10:06:40,472 | INFO     | zombie collector waiting for pid 548954
[2025-07-06 03:07:14] 2025-07-06 10:06:40,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 03:07:14] 2025-07-06 10:06:40,472 | INFO     | collected zombie processes
[2025-07-06 03:07:14] 2025-07-06 10:06:40,472 | INFO     | will attempt to kill all subprocesses of pid=548954
[2025-07-06 03:07:14] 2025-07-06 10:06:40,730 | INFO     | process IDs to be killed: [548954] (in reverse order)
[2025-07-06 03:07:14] 2025-07-06 10:06:40,822 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 03:07:14] 2025-07-06 10:06:40,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 03:07:14] 2025-07-06 10:06:40,830 | INFO     | did not find any defunct processes belonging to 548954
[2025-07-06 03:07:14] 2025-07-06 10:06:40,839 | INFO     | did not find any defunct processes belonging to 548954
[2025-07-06 03:07:14] 2025-07-06 10:06:40,839 | INFO     | ready for new job
[2025-07-06 03:07:14] 2025-07-06 10:06:40,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 03:07:14] 2025-07-06 10:06:40,840 | INFO     | ***************************************
[2025-07-06 03:07:14] 2025-07-06 10:06:40,840 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 03:07:14] 2025-07-06 10:06:40,840 | INFO     | ***************************************
[2025-07-06 03:07:14] 2025-07-06 10:06:40,840 | INFO     | 
[2025-07-06 03:07:14] 2025-07-06 10:06:40,842 | INFO     | architecture information:
[2025-07-06 03:07:14] 2025-07-06 10:06:40,843 | INFO     | executing command: cat /etc/os-release
[2025-07-06 03:07:14] 2025-07-06 10:06:40,926 | INFO     | cat /etc/os-release:
[2025-07-06 03:07:14] NAME="CentOS Linux"
[2025-07-06 03:07:14] VERSION="7 (Core)"
[2025-07-06 03:07:14] ID="centos"
[2025-07-06 03:07:14] ID_LIKE="rhel fedora"
[2025-07-06 03:07:14] VERSION_ID="7"
[2025-07-06 03:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 03:07:14] ANSI_COLOR="0;31"
[2025-07-06 03:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 03:07:14] HOME_URL="https://www.centos.org/"
[2025-07-06 03:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 03:07:14] 
[2025-07-06 03:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 03:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 03:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 03:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 03:07:14] 
[2025-07-06 03:07:14] 2025-07-06 10:06:40,926 | INFO     | ***************************************
[2025-07-06 03:07:14] 2025-07-06 10:06:41,438 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 03:07:14] 2025-07-06 10:06:41,459 | INFO     | sufficient remaining disk space (2119736229888 B)
[2025-07-06 03:07:14] 2025-07-06 10:06:41,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 03:07:14] 2025-07-06 10:06:41,464 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 03:07:14] 2025-07-06 10:06:41,464 | INFO     | update_server=False
[2025-07-06 03:07:14] 2025-07-06 10:06:41,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 03:07:14] 2025-07-06 10:06:41,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 03:07:14] 2025-07-06 10:06:41,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 03:07:14] 2025-07-06 10:06:41,469 | INFO     | aborting loop
[2025-07-06 03:07:14] 2025-07-06 10:06:41,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 03:07:14] 2025-07-06 10:06:41,789 | INFO     | all data control threads have been joined
[2025-07-06 03:07:14] 2025-07-06 10:06:42,010 | INFO     | all payload control threads have been joined
[2025-07-06 03:07:14] 2025-07-06 10:06:42,476 | INFO     | [job] job monitor thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:42,479 | INFO     | [job] retrieve thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:42,574 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:42,792 | INFO     | [payload] validate_post thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:42,805 | INFO     | [data] control thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:42,827 | INFO     | [payload] failed_post thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,003 | INFO     | [data] copytool_in thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,023 | INFO     | [payload] control thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,066 | INFO     | [job] validate thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,133 | INFO     | all job control threads have been joined
[2025-07-06 03:07:14] 2025-07-06 10:06:43,450 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,479 | INFO     | [data] copytool_out thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:43,484 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:44,139 | INFO     | [job] control thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:44,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 03:07:14] 2025-07-06 10:06:45,466 | INFO     | [job] queue monitor thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:45,480 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 03:07:14] 2025-07-06 10:06:46,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324739966784)>', '<ExcThread(monitor, started 140323753813760)>']
[2025-07-06 03:07:14] 2025-07-06 10:06:51,326 | INFO     | all workflow threads have been joined
[2025-07-06 03:07:14] 2025-07-06 10:06:51,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 03:07:14] 2025-07-06 10:06:51,327 | INFO     | traces error code: 0
[2025-07-06 03:07:14] 2025-07-06 10:06:51,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 03:07:14] 2025-07-06 10:07:12,427 | INFO     | PID=542604 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-06 03:07:14] 2025-07-06 10:07:12,427 | INFO     | .. there are 35 such processes running
[2025-07-06 03:07:14] 2025-07-06 10:07:12,428 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 03:07:14] 2025-07-06 10:07:12,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 03:07:14] 2025-07-06 10:07:12,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 03:07:14] 2025-07-06 10:07:12,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 03:07:14] 2025-07-06 10:07:12,428 | INFO     | [monitor] control thread has ended
[2025-07-06 03:07:14] 2025-07-06 10:07:12,648 [wrapper] ==== pilot stdout END ====
[2025-07-06 03:07:14] 2025-07-06 10:07:12,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 03:07:14] 2025-07-06 10:07:12,734 [wrapper] pilotpid: 542604
[2025-07-06 03:07:14] 2025-07-06 10:07:12,786 [wrapper] Pilot exit status: 0
[2025-07-06 03:07:14] 2025-07-06 10:07:12,961 [wrapper] pandaids: 6720716489
[2025-07-06 03:07:14] 2025-07-06 10:07:13,341 [wrapper] cleanup supervisor_pilot  542611 542605
[2025-07-06 03:07:14] 2025-07-06 10:07:13,393 [wrapper] Test setup, not cleaning
[2025-07-06 03:07:14] 2025-07-06 10:07:13,406 [wrapper] apfmon messages muted
[2025-07-06 03:07:14] 2025-07-06 10:07:13,419 [wrapper] ==== wrapper stdout END ====
[2025-07-06 03:07:14] 2025-07-06 10:07:13,443 [wrapper] ==== wrapper stderr END ====
[2025-07-06 03:07:14]  *** Error codes and diagnostics ***
[2025-07-06 03:07:14]     "exeErrorCode": 65,
[2025-07-06 03:07:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 03:07:14]     "pilotErrorCode": 1305,
[2025-07-06 03:07:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 03:07:14]  *** Listing of results directory ***
[2025-07-06 03:07:14] total 310780
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc    530466 Jul  5 22:52 pilot3.tar.gz
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc      5112 Jul  5 23:00 queuedata.json
[2025-07-06 03:07:14] -rwx------. 1 boinc boinc     36292 Jul  5 23:02 runpilot2-wrapper.sh
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc       100 Jul  6 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 03:07:14] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 03:02 run_atlas
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc       105 Jul  6 03:02 job.xml
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc      6597 Jul  6 03:02 init_data.xml
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc 314184723 Jul  6 03:02 EVNT.45482135._000253.pool.root.1
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc     15095 Jul  6 03:02 start_atlas.sh
[2025-07-06 03:07:14] drwxrwx--x. 2 boinc boinc      4096 Jul  6 03:02 shared
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc    542889 Jul  6 03:02 input.tar.gz
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc         0 Jul  6 03:02 boinc_lockfile
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc      2542 Jul  6 03:02 pandaJob.out
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc    970009 Jul  6 03:03 agis_schedconf.cvmfs.json
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc   1574083 Jul  6 03:03 agis_ddmendpoints.agis.ALL.json
[2025-07-06 03:07:14] drwx------. 4 boinc boinc      4096 Jul  6 03:03 pilot3
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc       953 Jul  6 03:04 memory_monitor_summary.json
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc     21574 Jul  6 03:04 log.45482137._006309.job.log.tgz.1
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc      8412 Jul  6 03:06 heartbeat.json
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc       523 Jul  6 03:06 boinc_task_state.xml
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc       822 Jul  6 03:07 pilotlog.txt
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc        95 Jul  6 03:07 pilot_heartbeat.json
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc     79087 Jul  6 03:07 log.45482137._006309.job.log.1
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc        22 Jul  6 03:07 wrapper_checkpoint.txt
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc       188 Jul  6 03:07 output.list
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc       620 Jul  6 03:07 runtime_log
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc    122880 Jul  6 03:07 result.tar.gz
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc      8192 Jul  6 03:07 boinc_mmap_file
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc       643 Jul  6 03:07 TdcMDm3cXs7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDUqKDm0Z1t8m.diag
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc      8485 Jul  6 03:07 runtime_log.err
[2025-07-06 03:07:14] -rw-r--r--. 1 boinc boinc     21790 Jul  6 03:07 stderr.txt
[2025-07-06 03:07:14] No HITS result produced
[2025-07-06 03:07:14]  *** Contents of shared directory: ***
[2025-07-06 03:07:14] total 307496
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc 314184723 Jul  6 03:02 ATLAS.root_0
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc     15095 Jul  6 03:02 start_atlas.sh
[2025-07-06 03:07:14] -rw-r--r--. 2 boinc boinc    542889 Jul  6 03:02 input.tar.gz
[2025-07-06 03:07:14] -rw-------. 1 boinc boinc    122880 Jul  6 03:07 result.tar.gz
03:07:15 (539021): run_atlas exited; CPU time 23.863604
03:07:15 (539021): called boinc_finish(0)

</stderr_txt>
]]>

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