Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:01:45 (2725154): wrapper (7.7.26015): starting
12:01:45 (2725154): wrapper: running run_atlas (--nthreads 12)
[2025-07-05 12:01:45] Arguments: --nthreads 12
[2025-07-05 12:01:45] Threads: 12
[2025-07-05 12:01:45] Checking for CVMFS
[2025-07-05 12:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 12:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 12:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 12:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 12:01:45] 2.11.5.0 7128 5855 238036 147976 0 394 38919183 45568001 8293 130560 0 67933835 99.810 28307703 26572 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-05 12:01:45] CVMFS is ok
[2025-07-05 12:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 12:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 12:01:45] Further information can be found at the LHC@home message board.
[2025-07-05 12:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 12:01:45] Checking for apptainer binary...
[2025-07-05 12:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 12:01:45] Running /usr/bin/apptainer --version
[2025-07-05 12:01:46] apptainer version 1.4.1-1.el9
[2025-07-05 12:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 12:01:46] wns0063.triumf.lcg
[2025-07-05 12:01:46] apptainer works
[2025-07-05 12:01:46] Set ATHENA_PROC_NUMBER=12
[2025-07-05 12:01:46] Set ATHENA_CORE_NUMBER=12
[2025-07-05 12:01:46] Starting ATLAS job with PandaID=6720661287
[2025-07-05 12:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 12:05:04]  *** The last 200 lines of the pilot log: ***
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | found no stored workdir sizes
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | WARNING  | wrong length of table data, x=[1751742135.0], y=[1572.0] (must be same and length>=4)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | could have reported an average CPU frequency of 2615 MHz (4 samples)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . Timing measurements:
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . get job = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . initial setup = 2 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload setup = 3 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-in = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload execution = 14 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-out = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . log creation = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720661287/pilotlog.txt
[2025-07-05 12:05:04] 2025-07-05 19:04:31,823 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-05 12:05:04] - Log from pilotlog.txt -
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | found no stored workdir sizes
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | WARNING  | wrong length of table data, x=[1751742135.0], y=[1572.0] (must be same and length>=4)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | could have reported an average CPU frequency of 2615 MHz (4 samples)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . Timing measurements:
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . get job = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . initial setup = 2 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload setup = 3 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-in = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload execution = 14 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-out = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . log creation = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720661287/pilotlog.txt
[2025-07-05 12:05:04] 2025-07-05 19:04:31,823 | WARNING  | 
[2025-07-05 12:05:04] [begin log extracts]
[2025-07-05 12:05:04] - Log from pilotlog.txt -
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | WARNING  | found no stored workdir sizes
[2025-07-05 12:05:04] 2025-07-05 19:04:31,810 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | WARNING  | wrong length of table data, x=[1751742135.0], y=[1572.0] (must be same and length>=4)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | could have reported an average CPU frequency of 2615 MHz (4 samples)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . Timing measurements:
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . get job = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . initial setup = 2 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload setup = 3 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-in = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . payload execution = 14 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . stage-out = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | . log creation = 0 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,811 | INFO     | ..............................
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 12:05:04] 2025-07-05 19:04:31,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720661287/pilotlog.txt
[2025-07-05 12:05:04] [end log extracts]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,824 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,824 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | 
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | job summary report
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | --------------------------------------------------
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | PanDA job id: 6720661287
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | task id: 45482062
[2025-07-05 12:05:04] 2025-07-05 19:04:31,920 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-05 12:02:21,925 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | pilot state: failed 
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | transexitcode: 65
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | exeerrorcode: 65
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | exitcode: 65
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | cpuconsumptiontime: 15 s
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | nevents: 0
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | neventsw: 0
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | pid: 2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | pgrp: 2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | corecount: 12
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | event service: False
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | sizes: {0: 2366550, 3: 2366812, 11: 2366840, 21: 2390036, 22: 2394328, 24: 2394356, 144: 2394650}
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | --------------------------------------------------
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | 
[2025-07-05 12:05:04] 2025-07-05 19:04:31,921 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | job 6720661287 has completed (purged errors)
[2025-07-05 12:05:04] 2025-07-05 19:04:31,937 | INFO     | overall cleanup function is called
[2025-07-05 12:05:04] 2025-07-05 19:04:32,943 | INFO     | --- collectZombieJob: --- 10, [2735052]
[2025-07-05 12:05:04] 2025-07-05 19:04:32,943 | INFO     | zombie collector waiting for pid 2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:32,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 12:05:04] 2025-07-05 19:04:32,943 | INFO     | collected zombie processes
[2025-07-05 12:05:04] 2025-07-05 19:04:32,943 | INFO     | will attempt to kill all subprocesses of pid=2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:33,073 | INFO     | process IDs to be killed: [2735052] (in reverse order)
[2025-07-05 12:05:04] 2025-07-05 19:04:33,123 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 12:05:04] 2025-07-05 19:04:33,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 12:05:04] 2025-07-05 19:04:33,129 | INFO     | did not find any defunct processes belonging to 2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:33,133 | INFO     | did not find any defunct processes belonging to 2735052
[2025-07-05 12:05:04] 2025-07-05 19:04:33,133 | INFO     | ready for new job
[2025-07-05 12:05:04] 2025-07-05 19:04:33,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 12:05:04] 2025-07-05 19:04:33,135 | INFO     | ***************************************
[2025-07-05 12:05:04] 2025-07-05 19:04:33,135 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 12:05:04] 2025-07-05 19:04:33,135 | INFO     | ***************************************
[2025-07-05 12:05:04] 2025-07-05 19:04:33,135 | INFO     | 
[2025-07-05 12:05:04] 2025-07-05 19:04:33,137 | INFO     | architecture information:
[2025-07-05 12:05:04] 2025-07-05 19:04:33,137 | INFO     | executing command: cat /etc/os-release
[2025-07-05 12:05:04] 2025-07-05 19:04:33,148 | INFO     | cat /etc/os-release:
[2025-07-05 12:05:04] NAME="CentOS Linux"
[2025-07-05 12:05:04] VERSION="7 (Core)"
[2025-07-05 12:05:04] ID="centos"
[2025-07-05 12:05:04] ID_LIKE="rhel fedora"
[2025-07-05 12:05:04] VERSION_ID="7"
[2025-07-05 12:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 12:05:04] ANSI_COLOR="0;31"
[2025-07-05 12:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 12:05:04] HOME_URL="https://www.centos.org/"
[2025-07-05 12:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 12:05:04] 
[2025-07-05 12:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 12:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 12:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 12:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 12:05:04] 
[2025-07-05 12:05:04] 2025-07-05 19:04:33,148 | INFO     | ***************************************
[2025-07-05 12:05:04] 2025-07-05 19:04:33,651 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-05 12:05:04] 2025-07-05 19:04:33,665 | INFO     | sufficient remaining disk space (2075269267456 B)
[2025-07-05 12:05:04] 2025-07-05 19:04:33,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 12:05:04] 2025-07-05 19:04:33,665 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 12:05:04] 2025-07-05 19:04:33,665 | INFO     | update_server=False
[2025-07-05 12:05:04] 2025-07-05 19:04:33,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 12:05:04] 2025-07-05 19:04:33,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 12:05:04] 2025-07-05 19:04:33,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 12:05:04] 2025-07-05 19:04:33,949 | INFO     | all job control threads have been joined
[2025-07-05 12:05:04] 2025-07-05 19:04:34,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 12:05:04] 2025-07-05 19:04:34,409 | INFO     | aborting loop
[2025-07-05 12:05:04] 2025-07-05 19:04:34,646 | INFO     | all payload control threads have been joined
[2025-07-05 12:05:04] 2025-07-05 19:04:34,671 | INFO     | [job] retrieve thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:34,671 | INFO     | [job] queue monitor thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:34,697 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:34,760 | INFO     | all data control threads have been joined
[2025-07-05 12:05:04] 2025-07-05 19:04:34,826 | INFO     | [payload] validate_post thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:34,954 | INFO     | [job] control thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:34,978 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 12:05:04] 2025-07-05 19:04:35,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,369 | INFO     | [payload] failed_post thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,414 | INFO     | [job] job monitor thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,649 | INFO     | [payload] control thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,671 | INFO     | [data] copytool_out thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,764 | INFO     | [data] control thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:35,970 | INFO     | [job] validate thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:36,084 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:36,156 | INFO     | [data] copytool_in thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:39,198 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 12:05:04] 2025-07-05 19:04:40,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192966821696)>', '<ExcThread(monitor, started 140192646141696)>']
[2025-07-05 12:05:04] 2025-07-05 19:04:45,521 | INFO     | all workflow threads have been joined
[2025-07-05 12:05:04] 2025-07-05 19:04:45,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 12:05:04] 2025-07-05 19:04:45,522 | INFO     | traces error code: 0
[2025-07-05 12:05:04] 2025-07-05 19:04:45,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 12:05:04] 2025-07-05 19:05:04,250 | INFO     | PID=2728739 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 12:05:04] 2025-07-05 19:05:04,250 | INFO     | .. there are 14 such processes running
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | CRITICAL | thread 'MainThread' is not alive
[2025-07-05 12:05:04] 2025-07-05 19:05:04,251 | INFO     | [monitor] control thread has ended
[2025-07-05 12:05:04] 2025-07-05 19:05:04,341 [wrapper] ==== pilot stdout END ====
[2025-07-05 12:05:04] 2025-07-05 19:05:04,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 12:05:04] 2025-07-05 19:05:04,346 [wrapper] pilotpid: 2728739
[2025-07-05 12:05:04] 2025-07-05 19:05:04,348 [wrapper] Pilot exit status: 0
[2025-07-05 12:05:04] 2025-07-05 19:05:04,356 [wrapper] pandaids: 6720661287
[2025-07-05 12:05:04] 2025-07-05 19:05:04,389 [wrapper] cleanup supervisor_pilot 2728745 2728740
[2025-07-05 12:05:04] 2025-07-05 19:05:04,391 [wrapper] Test setup, not cleaning
[2025-07-05 12:05:04] 2025-07-05 19:05:04,393 [wrapper] apfmon messages muted
[2025-07-05 12:05:04] 2025-07-05 19:05:04,395 [wrapper] ==== wrapper stdout END ====
[2025-07-05 12:05:04] 2025-07-05 19:05:04,397 [wrapper] ==== wrapper stderr END ====
[2025-07-05 12:05:04]  *** Error codes and diagnostics ***
[2025-07-05 12:05:04]     "exeErrorCode": 65,
[2025-07-05 12:05:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 12:05:04]     "pilotErrorCode": 1305,
[2025-07-05 12:05:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 12:05:04]  *** Listing of results directory ***
[2025-07-05 12:05:04] total 316200
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc    530466 Jul  5 07:45 pilot3.tar.gz
[2025-07-05 12:05:04] -rwx------. 1 boinc boinc     36292 Jul  5 07:57 runpilot2-wrapper.sh
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc      5112 Jul  5 07:57 queuedata.json
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc       100 Jul  5 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 12:05:04] -rwxr-xr-x. 1 boinc boinc      7986 Jul  5 12:01 run_atlas
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc       105 Jul  5 12:01 job.xml
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc      6598 Jul  5 12:01 init_data.xml
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc 319750782 Jul  5 12:01 EVNT.45482060._000324.pool.root.1
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc     15095 Jul  5 12:01 start_atlas.sh
[2025-07-05 12:05:04] drwxrwx--x. 2 boinc boinc      4096 Jul  5 12:01 shared
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc    542882 Jul  5 12:01 input.tar.gz
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc         0 Jul  5 12:01 boinc_lockfile
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc      2532 Jul  5 12:01 pandaJob.out
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc    970041 Jul  5 12:01 agis_schedconf.cvmfs.json
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc   1574083 Jul  5 12:01 agis_ddmendpoints.agis.ALL.json
[2025-07-05 12:05:04] drwx------. 4 boinc boinc      4096 Jul  5 12:01 pilot3
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc       953 Jul  5 12:02 memory_monitor_summary.json
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc       522 Jul  5 12:02 boinc_task_state.xml
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc     20603 Jul  5 12:02 log.45482062._008943.job.log.tgz.1
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc      8380 Jul  5 12:04 heartbeat.json
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc        22 Jul  5 12:05 wrapper_checkpoint.txt
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc      8192 Jul  5 12:05 boinc_mmap_file
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc       893 Jul  5 12:05 pilotlog.txt
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc        95 Jul  5 12:05 pilot_heartbeat.json
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc     74292 Jul  5 12:05 log.45482062._008943.job.log.1
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc       188 Jul  5 12:05 output.list
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc       620 Jul  5 12:05 runtime_log
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc    112640 Jul  5 12:05 result.tar.gz
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc      8485 Jul  5 12:05 runtime_log.err
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc       644 Jul  5 12:05 6dwKDmdVJs7n9Rq4apOajLDm4fhM0noT9bVof3QYDmobpKDmVmbcEm.diag
[2025-07-05 12:05:04] -rw-r--r--. 1 boinc boinc     21628 Jul  5 12:05 stderr.txt
[2025-07-05 12:05:04] No HITS result produced
[2025-07-05 12:05:04]  *** Contents of shared directory: ***
[2025-07-05 12:05:04] total 312920
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc 319750782 Jul  5 12:01 ATLAS.root_0
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc     15095 Jul  5 12:01 start_atlas.sh
[2025-07-05 12:05:04] -rw-r--r--. 2 boinc boinc    542882 Jul  5 12:01 input.tar.gz
[2025-07-05 12:05:04] -rw-------. 1 boinc boinc    112640 Jul  5 12:05 result.tar.gz
12:05:06 (2725154): run_atlas exited; CPU time 18.161712
12:05:06 (2725154): called boinc_finish(0)

</stderr_txt>
]]>

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