Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:54 (3967595): wrapper (7.7.26015): starting
05:13:54 (3967595): wrapper: running run_atlas (--nthreads 12)
[2025-07-05 05:13:54] Arguments: --nthreads 12
[2025-07-05 05:13:54] Threads: 12
[2025-07-05 05:13:54] Checking for CVMFS
[2025-07-05 05:13:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 05:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 05:13:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 05:13:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 05:13:57] 2.11.5.0 7073 5447 220176 147963 3 1119 42485972 45568001 18975 130560 0 61740956 99.813 30813954 38031 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-05 05:13:57] CVMFS is ok
[2025-07-05 05:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 05:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 05:13:57] Further information can be found at the LHC@home message board.
[2025-07-05 05:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 05:13:57] Checking for apptainer binary...
[2025-07-05 05:13:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 05:13:57] Running /usr/bin/apptainer --version
[2025-07-05 05:13:57] apptainer version 1.4.1-1.el9
[2025-07-05 05:13:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 05:13:58] wns0053.triumf.lcg
[2025-07-05 05:13:58] apptainer works
[2025-07-05 05:13:58] Set ATHENA_PROC_NUMBER=12
[2025-07-05 05:13:58] Set ATHENA_CORE_NUMBER=12
[2025-07-05 05:13:58] Starting ATLAS job with PandaID=6720613897
[2025-07-05 05:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 05:18:17]  *** The last 200 lines of the pilot log: ***
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | wrong length of table data, x=[1751717703.0], y=[1380.0] (must be same and length>=4)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | could have reported an average CPU frequency of 2612 MHz (4 samples)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . Timing measurements:
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . get job = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . initial setup = 3 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload setup = 14 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-in = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload execution = 31 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-out = 1 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . log creation = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720613897/pilotlog.txt
[2025-07-05 05:18:17] 2025-07-05 12:17:43,020 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-05 05:18:17] - Log from pilotlog.txt -
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720613897/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | extracted standard info from prmon json
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | wrong length of table data, x=[1751717703.0], y=[1380.0] (must be same and length>=4)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | could have reported an average CPU frequency of 2612 MHz (4 samples)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . Timing measurements:
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . get job = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . initial setup = 3 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload setup = 14 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-in = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload execution = 31 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-out = 1 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . log creation = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720613897/pilotlog.txt
[2025-07-05 05:18:17] 2025-07-05 12:17:43,020 | WARNING  | 
[2025-07-05 05:18:17] [begin log extracts]
[2025-07-05 05:18:17] - Log from pilotlog.txt -
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720613897/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | extracted standard info from prmon json
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 05:18:17] 2025-07-05 12:17:42,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | WARNING  | wrong length of table data, x=[1751717703.0], y=[1380.0] (must be same and length>=4)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | could have reported an average CPU frequency of 2612 MHz (4 samples)
[2025-07-05 05:18:17] 2025-07-05 12:17:42,860 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . Timing measurements:
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . get job = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . initial setup = 3 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload setup = 14 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-in = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . payload execution = 31 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . stage-out = 1 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | . log creation = 0 s
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | ..............................
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 05:18:17] 2025-07-05 12:17:42,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720613897/pilotlog.txt
[2025-07-05 05:18:17] [end log extracts]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,020 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-05 05:18:17] 2025-07-05 12:17:43,021 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | 
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | job summary report
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | --------------------------------------------------
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | PanDA job id: 6720613897
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | task id: 45482040
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-05 05:15:18,972 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-05 05:18:17] 2025-07-05 12:17:43,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | pilot state: failed 
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | transexitcode: 65
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | exeerrorcode: 65
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | exitcode: 65
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | cpuconsumptiontime: 17 s
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | nevents: 0
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | neventsw: 0
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | pid: 3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | pgrp: 3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | corecount: 12
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | event service: False
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | sizes: {0: 2366562, 9: 2366824, 11: 2366852, 49: 2390020, 51: 2394312, 54: 2394340, 184: 2394694}
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | --------------------------------------------------
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | 
[2025-07-05 05:18:17] 2025-07-05 12:17:43,189 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-05 05:18:17] 2025-07-05 12:17:43,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 05:18:17] 2025-07-05 12:17:43,425 | INFO     | job 6720613897 has completed (purged errors)
[2025-07-05 05:18:17] 2025-07-05 12:17:43,426 | INFO     | overall cleanup function is called
[2025-07-05 05:18:17] 2025-07-05 12:17:43,871 | INFO     | PID=3973606 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 05:18:17] 2025-07-05 12:17:43,872 | INFO     | .. there are 35 such processes running
[2025-07-05 05:18:17] 2025-07-05 12:17:44,480 | INFO     | --- collectZombieJob: --- 10, [3985247]
[2025-07-05 05:18:17] 2025-07-05 12:17:44,480 | INFO     | zombie collector waiting for pid 3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:44,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 05:18:17] 2025-07-05 12:17:44,480 | INFO     | collected zombie processes
[2025-07-05 05:18:17] 2025-07-05 12:17:44,480 | INFO     | will attempt to kill all subprocesses of pid=3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:45,584 | INFO     | process IDs to be killed: [3985247] (in reverse order)
[2025-07-05 05:18:17] 2025-07-05 12:17:45,726 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 05:18:17] 2025-07-05 12:17:45,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 05:18:17] 2025-07-05 12:17:45,736 | INFO     | did not find any defunct processes belonging to 3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:45,744 | INFO     | did not find any defunct processes belonging to 3985247
[2025-07-05 05:18:17] 2025-07-05 12:17:45,745 | INFO     | ready for new job
[2025-07-05 05:18:17] 2025-07-05 12:17:45,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 05:18:17] 2025-07-05 12:17:45,746 | INFO     | ***************************************
[2025-07-05 05:18:17] 2025-07-05 12:17:45,746 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 05:18:17] 2025-07-05 12:17:45,746 | INFO     | ***************************************
[2025-07-05 05:18:17] 2025-07-05 12:17:45,746 | INFO     | 
[2025-07-05 05:18:17] 2025-07-05 12:17:45,748 | INFO     | architecture information:
[2025-07-05 05:18:17] 2025-07-05 12:17:45,749 | INFO     | executing command: cat /etc/os-release
[2025-07-05 05:18:17] 2025-07-05 12:17:45,785 | INFO     | cat /etc/os-release:
[2025-07-05 05:18:17] NAME="CentOS Linux"
[2025-07-05 05:18:17] VERSION="7 (Core)"
[2025-07-05 05:18:17] ID="centos"
[2025-07-05 05:18:17] ID_LIKE="rhel fedora"
[2025-07-05 05:18:17] VERSION_ID="7"
[2025-07-05 05:18:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 05:18:17] ANSI_COLOR="0;31"
[2025-07-05 05:18:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 05:18:17] HOME_URL="https://www.centos.org/"
[2025-07-05 05:18:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 05:18:17] 
[2025-07-05 05:18:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 05:18:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 05:18:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 05:18:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 05:18:17] 
[2025-07-05 05:18:17] 2025-07-05 12:17:45,786 | INFO     | ***************************************
[2025-07-05 05:18:17] 2025-07-05 12:17:46,290 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-05 05:18:17] 2025-07-05 12:17:46,387 | INFO     | sufficient remaining disk space (1835407507456 B)
[2025-07-05 05:18:17] 2025-07-05 12:17:46,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 05:18:17] 2025-07-05 12:17:46,388 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 05:18:17] 2025-07-05 12:17:46,388 | INFO     | update_server=False
[2025-07-05 05:18:17] 2025-07-05 12:17:46,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 05:18:17] 2025-07-05 12:17:46,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 05:18:17] 2025-07-05 12:17:46,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 05:18:17] 2025-07-05 12:17:46,476 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-05 05:18:17] 2025-07-05 12:17:46,476 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-05 05:18:17] 2025-07-05 12:17:46,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 05:18:17] 2025-07-05 12:17:46,476 | INFO     | will abort loop
[2025-07-05 05:18:17] 2025-07-05 12:17:46,486 | INFO     | all job control threads have been joined
[2025-07-05 05:18:17] 2025-07-05 12:17:46,625 | INFO     | all payload control threads have been joined
[2025-07-05 05:18:17] 2025-07-05 12:17:46,767 | INFO     | all data control threads have been joined
[2025-07-05 05:18:17] 2025-07-05 12:17:47,398 | INFO     | [job] retrieve thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,482 | INFO     | [job] job monitor thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,493 | INFO     | [job] control thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,631 | INFO     | [payload] control thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,773 | INFO     | [data] control thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,876 | INFO     | [job] validate thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,897 | INFO     | [payload] failed_post thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:47,984 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,028 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,088 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,140 | INFO     | [data] copytool_in thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 05:18:17] 2025-07-05 12:17:48,396 | INFO     | [data] copytool_out thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:48,742 | INFO     | [payload] validate_post thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:49,224 | INFO     | [job] queue monitor thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:50,402 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 05:18:17] 2025-07-05 12:17:52,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614741423936)>', '<ExcThread(monitor, started 140614049974016)>']
[2025-07-05 05:18:17] 2025-07-05 12:17:57,250 | INFO     | all workflow threads have been joined
[2025-07-05 05:18:17] 2025-07-05 12:17:57,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 05:18:17] 2025-07-05 12:17:57,250 | INFO     | traces error code: 0
[2025-07-05 05:18:17] 2025-07-05 12:17:57,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 05:18:17] 2025-07-05 12:18:16,414 | INFO     | PID=3973606 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | INFO     | .. there are 35 such processes running
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 05:18:17] 2025-07-05 12:18:16,415 | INFO     | [monitor] control thread has ended
[2025-07-05 05:18:17] 2025-07-05 12:18:16,745 [wrapper] ==== pilot stdout END ====
[2025-07-05 05:18:17] 2025-07-05 12:18:16,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 05:18:17] 2025-07-05 12:18:16,749 [wrapper] pilotpid: 3973606
[2025-07-05 05:18:17] 2025-07-05 12:18:16,750 [wrapper] Pilot exit status: 0
[2025-07-05 05:18:17] 2025-07-05 12:18:16,805 [wrapper] pandaids: 6720613897
[2025-07-05 05:18:17] 2025-07-05 12:18:17,022 [wrapper] cleanup supervisor_pilot 3973615 3973607
[2025-07-05 05:18:17] 2025-07-05 12:18:17,040 [wrapper] Test setup, not cleaning
[2025-07-05 05:18:17] 2025-07-05 12:18:17,043 [wrapper] apfmon messages muted
[2025-07-05 05:18:17] 2025-07-05 12:18:17,045 [wrapper] ==== wrapper stdout END ====
[2025-07-05 05:18:17] 2025-07-05 12:18:17,047 [wrapper] ==== wrapper stderr END ====
[2025-07-05 05:18:17]  *** Error codes and diagnostics ***
[2025-07-05 05:18:17]     "exeErrorCode": 65,
[2025-07-05 05:18:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 05:18:17]     "pilotErrorCode": 1305,
[2025-07-05 05:18:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 05:18:17]  *** Listing of results directory ***
[2025-07-05 05:18:17] total 311188
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc    530466 Jul  5 01:35 pilot3.tar.gz
[2025-07-05 05:18:17] -rwx------. 1 boinc boinc     36292 Jul  5 01:37 runpilot2-wrapper.sh
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc      5112 Jul  5 01:37 queuedata.json
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc       100 Jul  5 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 05:18:17] -rwxr-xr-x. 1 boinc boinc      7986 Jul  5 05:13 run_atlas
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc       105 Jul  5 05:13 job.xml
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc      6597 Jul  5 05:13 init_data.xml
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc 314602327 Jul  5 05:13 EVNT.45482038._000187.pool.root.1
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc     15095 Jul  5 05:13 start_atlas.sh
[2025-07-05 05:18:17] drwxrwx--x. 2 boinc boinc      4096 Jul  5 05:13 shared
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc    542885 Jul  5 05:13 input.tar.gz
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc         0 Jul  5 05:13 boinc_lockfile
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc      2544 Jul  5 05:13 pandaJob.out
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc    970033 Jul  5 05:14 agis_schedconf.cvmfs.json
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc   1574083 Jul  5 05:14 agis_ddmendpoints.agis.ALL.json
[2025-07-05 05:18:17] drwx------. 4 boinc boinc      4096 Jul  5 05:14 pilot3
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc       951 Jul  5 05:15 memory_monitor_summary.json
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc     20744 Jul  5 05:15 log.45482040._004669.job.log.tgz.1
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc        95 Jul  5 05:17 pilot_heartbeat.json
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc      8411 Jul  5 05:17 heartbeat.json
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc       523 Jul  5 05:18 boinc_task_state.xml
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc        22 Jul  5 05:18 wrapper_checkpoint.txt
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc       823 Jul  5 05:18 pilotlog.txt
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc      8192 Jul  5 05:18 boinc_mmap_file
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc     78451 Jul  5 05:18 log.45482040._004669.job.log.1
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc       188 Jul  5 05:18 output.list
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc       620 Jul  5 05:18 runtime_log
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc    122880 Jul  5 05:18 result.tar.gz
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc      8485 Jul  5 05:18 runtime_log.err
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc       643 Jul  5 05:18 JDLMDm7ZDs7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBCpKDmUdYsjn.diag
[2025-07-05 05:18:17] -rw-r--r--. 1 boinc boinc     21931 Jul  5 05:18 stderr.txt
[2025-07-05 05:18:17] No HITS result produced
[2025-07-05 05:18:17]  *** Contents of shared directory: ***
[2025-07-05 05:18:17] total 307904
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc 314602327 Jul  5 05:13 ATLAS.root_0
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc     15095 Jul  5 05:13 start_atlas.sh
[2025-07-05 05:18:17] -rw-r--r--. 2 boinc boinc    542885 Jul  5 05:13 input.tar.gz
[2025-07-05 05:18:17] -rw-------. 1 boinc boinc    122880 Jul  5 05:18 result.tar.gz
05:18:18 (3967595): run_atlas exited; CPU time 23.548180
05:18:18 (3967595): called boinc_finish(0)

</stderr_txt>
]]>

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