Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:05 (37898): wrapper (7.7.26015): starting
02:27:05 (37898): wrapper: running run_atlas (--nthreads 3)
[2025-07-05 02:27:05] Arguments: --nthreads 3
[2025-07-05 02:27:05] Threads: 3
[2025-07-05 02:27:05] Checking for CVMFS
[2025-07-05 02:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 02:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 02:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 02:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 02:27:05] 2.9.2.0 10330 116 49392 147946 3 55 31647104 36864001 0 130560 0 72566 99.969 5484 3223 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-05 02:27:05] CVMFS is ok
[2025-07-05 02:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 02:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 02:27:05] Further information can be found at the LHC@home message board.
[2025-07-05 02:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 02:27:05] Checking for apptainer binary...
[2025-07-05 02:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 02:27:05] Running /usr/bin/apptainer --version
[2025-07-05 02:27:05] apptainer version 1.4.1-1.1
[2025-07-05 02:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 02:27:05] belleA253
[2025-07-05 02:27:05] apptainer works
[2025-07-05 02:27:05] Set ATHENA_PROC_NUMBER=3
[2025-07-05 02:27:05] Set ATHENA_CORE_NUMBER=3
[2025-07-05 02:27:05] Starting ATLAS job with PandaID=6720532985
[2025-07-05 02:27:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 04:21:10]  *** The last 200 lines of the pilot log: ***
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | mean x: 1751678635.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | mean y: 2460431.0535714286
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | -- intersect: 58975862823.296364
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | intersect: 58975862823.296364
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | chi2: 2.2052447895591882
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | sum of square deviations: 379832238.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | sum of deviations: -6624078937.999998
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | mean x: 1751678483.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,314 | INFO     | mean y: 2481787.4392523365
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | -- intersect: 30550853896.35984
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | intersect: 30550853896.35984
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | chi2: 1.5777409643473606
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | current chi2=1.5777409643473606 (change=28.45506440748743 %)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | sum of square deviations: 329031285.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | sum of deviations: -5118179562.999997
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | mean x: 1751678330.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | mean y: 2486311.745098039
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | -- intersect: 27250364027.966263
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | intersect: 27250364027.966263
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | chi2: 1.5807021853908365
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | current chi2=1.5807021853908365 (change=-0.18768740309033435 %)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | right removable region: 101
[2025-07-05 04:21:10] 2025-07-05 02:20:37,315 | INFO     | sum of square deviations: 379832238.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | sum of deviations: -29144131650.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | mean x: 1751678788.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | mean y: 2498943.504672897
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | -- intersect: 134406986237.14098
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | intersect: 134406986237.14098
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | chi2: 0.7172537292245621
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | current chi2=0.7172537292245621 (change=67.47509697696937 %)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,316 | INFO     | sum of square deviations: 329031285.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | sum of deviations: -25177448385.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | mean x: 1751678940.5
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | mean y: 2487008.970588235
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | -- intersect: 134040823349.50096
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | intersect: 134040823349.50096
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | chi2: 0.7167621801538314
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | current chi2=0.7167621801538314 (change=0.06853210387098344 %)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | left removable region: 20
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | sum of square deviations: 164765880.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | sum of deviations: -11147504841.000002
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | mean x: 1751678910.0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | mean y: 2502287.654320988
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | -- intersect: 118515201209.92273
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | intersect: 118515201209.92273
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | chi2: 0.04486722243504691
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | -- intersect: 118515201209.92273
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | current memory leak: -67.66 B/s (using 81 data points, chi2=0.04)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | could have reported an average CPU frequency of 3915 MHz (7 samples)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | ..............................
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | . Timing measurements:
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | . get job = 0 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,317 | INFO     | . initial setup = 1 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | . payload setup = 3 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | . stage-in = 0 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | . payload execution = 6784 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | . stage-out = 0 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | . log creation = 0 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,318 | INFO     | ..............................
[2025-07-05 04:21:10] 2025-07-05 02:20:37,484 | INFO     | 
[2025-07-05 04:21:10] 2025-07-05 02:20:37,484 | INFO     | job summary report
[2025-07-05 04:21:10] 2025-07-05 02:20:37,484 | INFO     | --------------------------------------------------
[2025-07-05 04:21:10] 2025-07-05 02:20:37,484 | INFO     | PanDA job id: 6720532985
[2025-07-05 04:21:10] 2025-07-05 02:20:37,484 | INFO     | task id: 45482040
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | errors: (none)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | pilot state: finished 
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | transexitcode: 0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | exeerrorcode: 0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | exeerrordiag: 
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | exitcode: 0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | exitmsg: OK
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | cpuconsumptiontime: 19732 s
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | nevents: 400
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | neventsw: 0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | pid: 48016
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | pgrp: 48016
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | corecount: 3
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | event service: False
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | sizes: {0: 2366563, 3: 2366825, 11: 2366853, 6788: 2403201, 6789: 2403201, 6794: 2403395}
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | --------------------------------------------------
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | 
[2025-07-05 04:21:10] 2025-07-05 02:20:37,485 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-05 04:21:10] 2025-07-05 02:20:37,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | job 6720532985 has completed (purged errors)
[2025-07-05 04:21:10] 2025-07-05 02:20:37,499 | INFO     | overall cleanup function is called
[2025-07-05 04:21:10] 2025-07-05 02:20:38,090 | INFO     | PID=41534 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-05 04:21:10] 2025-07-05 02:20:38,506 | INFO     | --- collectZombieJob: --- 10, [48016]
[2025-07-05 04:21:10] 2025-07-05 02:20:38,506 | INFO     | zombie collector waiting for pid 48016
[2025-07-05 04:21:10] 2025-07-05 02:20:38,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 04:21:10] 2025-07-05 02:20:38,506 | INFO     | collected zombie processes
[2025-07-05 04:21:10] 2025-07-05 02:20:38,506 | INFO     | will attempt to kill all subprocesses of pid=48016
[2025-07-05 04:21:10] 2025-07-05 02:20:38,545 | INFO     | process IDs to be killed: [48016] (in reverse order)
[2025-07-05 04:21:10] 2025-07-05 02:20:38,568 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 04:21:10] 2025-07-05 02:20:38,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 04:21:10] 2025-07-05 02:20:38,569 | INFO     | did not find any defunct processes belonging to 48016
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | did not find any defunct processes belonging to 48016
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | ready for new job
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | ***************************************
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | ***************************************
[2025-07-05 04:21:10] 2025-07-05 02:20:38,570 | INFO     | 
[2025-07-05 04:21:10] 2025-07-05 02:20:38,571 | INFO     | architecture information:
[2025-07-05 04:21:10] 2025-07-05 02:20:38,571 | INFO     | executing command: cat /etc/os-release
[2025-07-05 04:21:10] 2025-07-05 02:20:38,578 | INFO     | cat /etc/os-release:
[2025-07-05 04:21:10] NAME="CentOS Linux"
[2025-07-05 04:21:10] VERSION="7 (Core)"
[2025-07-05 04:21:10] ID="centos"
[2025-07-05 04:21:10] ID_LIKE="rhel fedora"
[2025-07-05 04:21:10] VERSION_ID="7"
[2025-07-05 04:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 04:21:10] ANSI_COLOR="0;31"
[2025-07-05 04:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 04:21:10] HOME_URL="https://www.centos.org/"
[2025-07-05 04:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 04:21:10] 
[2025-07-05 04:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 04:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 04:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 04:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 04:21:10] 
[2025-07-05 04:21:10] 2025-07-05 02:20:38,579 | INFO     | ***************************************
[2025-07-05 04:21:10] 2025-07-05 02:20:38,960 | WARNING  | process 48016 can no longer be monitored (due to stat problems) - aborting
[2025-07-05 04:21:10] 2025-07-05 02:20:38,986 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 04:21:10] 2025-07-05 02:20:39,020 | INFO     | number of running child processes to parent process 48016: 1
[2025-07-05 04:21:10] 2025-07-05 02:20:39,020 | INFO     | maximum number of monitored processes: 6
[2025-07-05 04:21:10] 2025-07-05 02:20:39,020 | INFO     | aborting job monitoring since job object (job id=6720532985) has expired
[2025-07-05 04:21:10] 2025-07-05 02:20:39,082 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-05 04:21:10] 2025-07-05 02:20:39,093 | INFO     | sufficient remaining disk space (369450024960 B)
[2025-07-05 04:21:10] 2025-07-05 02:20:39,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 04:21:10] 2025-07-05 02:20:39,093 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 04:21:10] 2025-07-05 02:20:39,093 | INFO     | update_server=False
[2025-07-05 04:21:10] 2025-07-05 02:20:39,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 04:21:10] 2025-07-05 02:20:39,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 04:21:10] 2025-07-05 02:20:39,094 | INFO     | will abort loop
[2025-07-05 04:21:10] 2025-07-05 02:20:39,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 04:21:10] 2025-07-05 02:20:39,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 04:21:10] 2025-07-05 02:20:39,792 | INFO     | all data control threads have been joined
[2025-07-05 04:21:10] 2025-07-05 02:20:40,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 04:21:10] 2025-07-05 02:20:40,099 | INFO     | [job] job monitor thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,099 | INFO     | [job] retrieve thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,100 | INFO     | [job] queue monitor thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,132 | INFO     | all job control threads have been joined
[2025-07-05 04:21:10] 2025-07-05 02:20:40,168 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,176 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,294 | INFO     | all payload control threads have been joined
[2025-07-05 04:21:10] 2025-07-05 02:20:40,697 | INFO     | [payload] validate_post thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,798 | INFO     | [data] control thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:40,871 | INFO     | [data] copytool_in thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:41,138 | INFO     | [job] control thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:41,192 | INFO     | [payload] failed_post thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:41,300 | INFO     | [payload] control thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:41,512 | INFO     | [job] validate thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:41,574 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:42,029 | INFO     | [data] copytool_out thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:43,101 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:49,347 | INFO     | job.realtimelogging is not enabled
[2025-07-05 04:21:10] 2025-07-05 02:20:50,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 04:21:10] 2025-07-05 02:20:50,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887255885632)>', '<ExcThread(monitor, started 139886539564800)>']
[2025-07-05 04:21:10] 2025-07-05 02:20:55,881 | INFO     | all workflow threads have been joined
[2025-07-05 04:21:10] 2025-07-05 02:20:55,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 04:21:10] 2025-07-05 02:20:55,882 | INFO     | traces error code: 0
[2025-07-05 04:21:10] 2025-07-05 02:20:55,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 04:21:10] 2025-07-05 02:21:10,208 | INFO     | PID=41534 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | CRITICAL | thread 'MainThread' is not alive
[2025-07-05 04:21:10] 2025-07-05 02:21:10,209 | INFO     | [monitor] control thread has ended
[2025-07-05 04:21:10] 2025-07-05 02:21:10,252 [wrapper] ==== pilot stdout END ====
[2025-07-05 04:21:10] 2025-07-05 02:21:10,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 04:21:10] 2025-07-05 02:21:10,256 [wrapper] pilotpid: 41534
[2025-07-05 04:21:10] 2025-07-05 02:21:10,258 [wrapper] Pilot exit status: 0
[2025-07-05 04:21:10] 2025-07-05 02:21:10,265 [wrapper] pandaids: 6720532985
[2025-07-05 04:21:10] 2025-07-05 02:21:10,280 [wrapper] cleanup supervisor_pilot   62363 41535
[2025-07-05 04:21:10] 2025-07-05 02:21:10,282 [wrapper] Test setup, not cleaning
[2025-07-05 04:21:10] 2025-07-05 02:21:10,284 [wrapper] apfmon messages muted
[2025-07-05 04:21:10] 2025-07-05 02:21:10,286 [wrapper] ==== wrapper stdout END ====
[2025-07-05 04:21:10] 2025-07-05 02:21:10,288 [wrapper] ==== wrapper stderr END ====
[2025-07-05 04:21:10]  *** Error codes and diagnostics ***
[2025-07-05 04:21:10]     "exeErrorCode": 0,
[2025-07-05 04:21:10]     "exeErrorDiag": "",
[2025-07-05 04:21:10]     "pilotErrorCode": 0,
[2025-07-05 04:21:10]     "pilotErrorDiag": "",
[2025-07-05 04:21:10]  *** Listing of results directory ***
[2025-07-05 04:21:10] total 564232
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc    530466 Jul  4 21:21 pilot3.tar.gz
[2025-07-05 04:21:10] -rwx------ 1 boinc boinc     36292 Jul  4 22:16 runpilot2-wrapper.sh
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc      5112 Jul  4 22:16 queuedata.json
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc       100 Jul  5 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 04:21:10] -rwxr-xr-x 1 boinc boinc      7986 Jul  5 02:27 run_atlas
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc       105 Jul  5 02:27 job.xml
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc 311975909 Jul  5 02:27 EVNT.45482038._000026.pool.root.1
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc    542880 Jul  5 02:27 input.tar.gz
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc     15095 Jul  5 02:27 start_atlas.sh
[2025-07-05 04:21:10] drwxrwx--x 2 boinc boinc      4096 Jul  5 02:27 shared
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc         0 Jul  5 02:27 boinc_setup_complete
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc      6450 Jul  5 02:27 init_data.xml
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc         0 Jul  5 02:27 boinc_lockfile
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc      2542 Jul  5 02:27 pandaJob.out
[2025-07-05 04:21:10] -rw------- 1 boinc boinc    966201 Jul  5 02:27 agis_schedconf.cvmfs.json
[2025-07-05 04:21:10] -rw------- 1 boinc boinc   1574083 Jul  5 02:27 agis_ddmendpoints.agis.ALL.json
[2025-07-05 04:21:10] drwx------ 4 boinc boinc      4096 Jul  5 02:27 pilot3
[2025-07-05 04:21:10] -rw------- 1 boinc boinc 260146171 Jul  5 04:20 HITS.45482040._000648.pool.root.1
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc       530 Jul  5 04:20 boinc_task_state.xml
[2025-07-05 04:21:10] -rw------- 1 boinc boinc      1019 Jul  5 04:20 memory_monitor_summary.json
[2025-07-05 04:21:10] -rw------- 1 boinc boinc    259779 Jul  5 04:20 log.45482040._000648.job.log.tgz.1
[2025-07-05 04:21:10] -rw------- 1 boinc boinc      7751 Jul  5 04:20 heartbeat.json
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc        27 Jul  5 04:21 wrapper_checkpoint.txt
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc      8192 Jul  5 04:21 boinc_mmap_file
[2025-07-05 04:21:10] -rw------- 1 boinc boinc       815 Jul  5 04:21 pilotlog.txt
[2025-07-05 04:21:10] -rw------- 1 boinc boinc        95 Jul  5 04:21 pilot_heartbeat.json
[2025-07-05 04:21:10] -rw------- 1 boinc boinc    644782 Jul  5 04:21 log.45482040._000648.job.log.1
[2025-07-05 04:21:10] -rw------- 1 boinc boinc       357 Jul  5 04:21 output.list
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc       620 Jul  5 04:21 runtime_log
[2025-07-05 04:21:10] -rw------- 1 boinc boinc    921600 Jul  5 04:21 result.tar.gz
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc      8749 Jul  5 04:21 runtime_log.err
[2025-07-05 04:21:10] -rw------- 1 boinc boinc       662 Jul  5 04:21 hSOLDmY01r7n9Rq4apOajLDm4fhM0noT9bVof3QYDmksnKDmQ70Een.diag
[2025-07-05 04:21:10] -rw-r--r-- 1 boinc boinc     21091 Jul  5 04:21 stderr.txt
[2025-07-05 04:21:10] HITS file was successfully produced:
[2025-07-05 04:21:10] -rw------- 1 boinc boinc 260146171 Jul  5 04:20 shared/HITS.pool.root.1
[2025-07-05 04:21:10]  *** Contents of shared directory: ***
[2025-07-05 04:21:10] total 560172
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc 311975909 Jul  5 02:27 ATLAS.root_0
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc    542880 Jul  5 02:27 input.tar.gz
[2025-07-05 04:21:10] -rw-r--r-- 2 boinc boinc     15095 Jul  5 02:27 start_atlas.sh
[2025-07-05 04:21:10] -rw------- 1 boinc boinc 260146171 Jul  5 04:20 HITS.pool.root.1
[2025-07-05 04:21:10] -rw------- 1 boinc boinc    921600 Jul  5 04:21 result.tar.gz
04:21:31 (37898): run_atlas exited; CPU time 19754.945846
04:21:31 (37898): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN