Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:39:25 (68083): wrapper (7.7.26015): starting
01:39:25 (68083): wrapper: running run_atlas (--nthreads 4)
[2025-07-05 01:39:25] Arguments: --nthreads 4
[2025-07-05 01:39:25] Threads: 4
[2025-07-05 01:39:25] Checking for CVMFS
[2025-07-05 01:39:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 01:39:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 01:39:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 01:39:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 01:39:25] 2.9.2.0 11224 202 57200 147945 1 56 26556351 36864000 0 130560 0 144667 99.972 9558 10423 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-05 01:39:25] CVMFS is ok
[2025-07-05 01:39:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 01:39:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 01:39:25] Further information can be found at the LHC@home message board.
[2025-07-05 01:39:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 01:39:25] Checking for apptainer binary...
[2025-07-05 01:39:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 01:39:25] Running /usr/bin/apptainer --version
[2025-07-05 01:39:25] apptainer version 1.4.1-1.1
[2025-07-05 01:39:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 01:39:25] thA373a
[2025-07-05 01:39:25] apptainer works
[2025-07-05 01:39:25] Set ATHENA_PROC_NUMBER=4
[2025-07-05 01:39:25] Set ATHENA_CORE_NUMBER=4
[2025-07-05 01:39:25] Starting ATLAS job with PandaID=6720535249
[2025-07-05 01:39:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 03:19:14]  *** The last 200 lines of the pilot log: ***
[2025-07-05 03:19:14]  lfn=log.45482040._001069.job.log.tgz.1
[2025-07-05 03:19:14]  mtime=0
[2025-07-05 03:19:14]  protocol_id=None
[2025-07-05 03:19:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-05 03:19:14]  replicas=None
[2025-07-05 03:19:14]  scope=mc23_13p6TeV
[2025-07-05 03:19:14]  status=None
[2025-07-05 03:19:14]  status_code=0
[2025-07-05 03:19:14]  storage_token=
[2025-07-05 03:19:14]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6720535249/log.45482040._001069.job.log.tgz.1
[2025-07-05 03:19:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/5f/log.45482040._001069.job.log.tgz.1
[2025-07-05 03:19:14]  workdir=None
[2025-07-05 03:19:14] ]
[2025-07-05 03:19:14] 2025-07-05 01:18:29,174 | INFO     | transferring file log.45482040._001069.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6720535249/log.45482040._001069.job.log.tgz.1 to /local/data/boinc/
[2025-07-05 03:19:14] 2025-07-05 01:18:29,174 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6720535249/log.45482040._001069.job.log.tgz.1 /local/data/boinc/slots/0/log.45482040._0010
[2025-07-05 03:19:14] 2025-07-05 01:18:29,192 | INFO     | adding to output.list: log.45482040._001069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/5f/log.45482040._001069.job.log.tg
[2025-07-05 03:19:14] 2025-07-05 01:18:29,193 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-05 03:19:14] 2025-07-05 01:18:29,193 | INFO     | summary of transferred files:
[2025-07-05 03:19:14] 2025-07-05 01:18:29,193 | INFO     |  -- lfn=log.45482040._001069.job.log.tgz.1, status_code=0, status=transferred
[2025-07-05 03:19:14] 2025-07-05 01:18:29,193 | INFO     | stage-out finished correctly
[2025-07-05 03:19:14] 2025-07-05 01:18:30,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-05 03:19:14] 2025-07-05 01:18:30,812 | INFO     | monitor loop #455: job 0:6720535249 is in state 'finished'
[2025-07-05 03:19:14] 2025-07-05 01:18:30,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-05 03:19:14] 2025-07-05 01:18:32,004 | INFO     | job 6720535249 has state=finished
[2025-07-05 03:19:14] 2025-07-05 01:18:32,004 | INFO     | preparing for final server update for job 6720535249 in state='finished'
[2025-07-05 03:19:14] 2025-07-05 01:18:32,004 | INFO     | this job has now completed (state=finished)
[2025-07-05 03:19:14] 2025-07-05 01:18:32,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-05 03:19:14] 2025-07-05 01:18:32,004 | INFO     | log transfer has been attempted: DONE
[2025-07-05 03:19:14] 2025-07-05 01:18:32,005 | INFO     | job 6720535249 has finished - writing final server update
[2025-07-05 03:19:14] 2025-07-05 01:18:32,005 | INFO     | total number of processed events: 400 (read)
[2025-07-05 03:19:14] 2025-07-05 01:18:32,005 | INFO     | executing command: lscpu
[2025-07-05 03:19:14] 2025-07-05 01:18:32,026 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-05 03:19:14] 2025-07-05 01:18:33,317 | INFO     | monitor loop #456: job 0:6720535249 is in state 'finished'
[2025-07-05 03:19:14] 2025-07-05 01:18:33,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-05 03:19:14] 2025-07-05 01:18:35,820 | INFO     | monitor loop #457: job 0:6720535249 is in state 'finished'
[2025-07-05 03:19:14] 2025-07-05 01:18:35,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,159 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-05 03:19:14] 2025-07-05 01:18:36,160 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3333.188562499999
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6720535249/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | INFO     | extracted standard info from prmon json
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 03:19:14] 2025-07-05 01:18:36,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 03:19:14] 2025-07-05 01:18:36,163 | INFO     | fitting pss+swap vs Time
[2025-07-05 03:19:14] 2025-07-05 01:18:36,163 | INFO     | sum of square deviations: 226022842.5
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | sum of deviations: -14159314235.499996
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | mean x: 1751675416.5
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | mean y: 2528040.1222222224
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | -- intersect: 109737112325.88455
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | intersect: 109737112325.88455
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | chi2: 0.08424260410642641
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | -- intersect: 109737112325.88455
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | current memory leak: -62.65 B/s (using 90 data points, chi2=0.08)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | could have reported an average CPU frequency of 3788 MHz (7 samples)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | ..............................
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . Timing measurements:
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . get job = 0 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . initial setup = 1 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . payload setup = 5 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . stage-in = 0 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . payload execution = 5911 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . stage-out = 0 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | . log creation = 0 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,164 | INFO     | ..............................
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | 
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | job summary report
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | --------------------------------------------------
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | PanDA job id: 6720535249
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | task id: 45482040
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | errors: (none)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | pilot state: finished 
[2025-07-05 03:19:14] 2025-07-05 01:18:36,205 | INFO     | transexitcode: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | exeerrorcode: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | exeerrordiag: 
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | exitcode: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | exitmsg: OK
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | cpuconsumptiontime: 22691 s
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | nevents: 400
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | neventsw: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | pid: 78409
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | pgrp: 78409
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | corecount: 4
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | event service: False
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | sizes: {0: 2366566, 1: 2366566, 4: 2366856, 11: 2366884, 5920: 2393768, 5922: 2402772, 5923: 2402956, 5929: 2403150}
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | --------------------------------------------------
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | 
[2025-07-05 03:19:14] 2025-07-05 01:18:36,206 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-05 03:19:14] 2025-07-05 01:18:36,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | job 6720535249 has completed (purged errors)
[2025-07-05 03:19:14] 2025-07-05 01:18:36,227 | INFO     | overall cleanup function is called
[2025-07-05 03:19:14] 2025-07-05 01:18:37,234 | INFO     | --- collectZombieJob: --- 10, [78409]
[2025-07-05 03:19:14] 2025-07-05 01:18:37,235 | INFO     | zombie collector waiting for pid 78409
[2025-07-05 03:19:14] 2025-07-05 01:18:37,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 03:19:14] 2025-07-05 01:18:37,235 | INFO     | collected zombie processes
[2025-07-05 03:19:14] 2025-07-05 01:18:37,235 | INFO     | will attempt to kill all subprocesses of pid=78409
[2025-07-05 03:19:14] 2025-07-05 01:18:37,279 | INFO     | process IDs to be killed: [78409] (in reverse order)
[2025-07-05 03:19:14] 2025-07-05 01:18:37,312 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 03:19:14] 2025-07-05 01:18:37,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 03:19:14] 2025-07-05 01:18:37,313 | INFO     | did not find any defunct processes belonging to 78409
[2025-07-05 03:19:14] 2025-07-05 01:18:37,315 | INFO     | did not find any defunct processes belonging to 78409
[2025-07-05 03:19:14] 2025-07-05 01:18:37,315 | INFO     | ready for new job
[2025-07-05 03:19:14] 2025-07-05 01:18:37,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | ***************************************
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | ***************************************
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | 
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | architecture information:
[2025-07-05 03:19:14] 2025-07-05 01:18:37,316 | INFO     | executing command: cat /etc/os-release
[2025-07-05 03:19:14] 2025-07-05 01:18:37,330 | INFO     | cat /etc/os-release:
[2025-07-05 03:19:14] NAME="CentOS Linux"
[2025-07-05 03:19:14] VERSION="7 (Core)"
[2025-07-05 03:19:14] ID="centos"
[2025-07-05 03:19:14] ID_LIKE="rhel fedora"
[2025-07-05 03:19:14] VERSION_ID="7"
[2025-07-05 03:19:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 03:19:14] ANSI_COLOR="0;31"
[2025-07-05 03:19:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 03:19:14] HOME_URL="https://www.centos.org/"
[2025-07-05 03:19:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 03:19:14] 
[2025-07-05 03:19:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 03:19:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 03:19:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 03:19:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 03:19:14] 
[2025-07-05 03:19:14] 2025-07-05 01:18:37,330 | INFO     | ***************************************
[2025-07-05 03:19:14] 2025-07-05 01:18:37,833 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | INFO     | sufficient remaining disk space (328841822208 B)
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | INFO     | update_server=False
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 03:19:14] 2025-07-05 01:18:37,851 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-05 03:19:14] 2025-07-05 01:18:37,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 03:19:14] 2025-07-05 01:18:37,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 03:19:14] 2025-07-05 01:18:37,852 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 03:19:14] 2025-07-05 01:18:37,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 03:19:14] 2025-07-05 01:18:37,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 03:19:14] 2025-07-05 01:18:38,119 | INFO     | all payload control threads have been joined
[2025-07-05 03:19:14] 2025-07-05 01:18:38,324 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-05 03:19:14] 2025-07-05 01:18:38,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-05 03:19:14] 2025-07-05 01:18:38,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 03:19:14] 2025-07-05 01:18:38,324 | INFO     | will abort loop
[2025-07-05 03:19:14] 2025-07-05 01:18:38,350 | INFO     | all job control threads have been joined
[2025-07-05 03:19:14] 2025-07-05 01:18:38,752 | INFO     | all data control threads have been joined
[2025-07-05 03:19:14] 2025-07-05 01:18:38,857 | INFO     | [job] retrieve thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:38,858 | INFO     | [job] queue monitor thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:38,936 | INFO     | [payload] failed_post thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,125 | INFO     | [payload] control thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,330 | INFO     | [job] job monitor thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,356 | INFO     | [job] control thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,384 | INFO     | [job] validate thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,509 | INFO     | [payload] validate_post thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,515 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,588 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,758 | INFO     | [data] control thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:39,858 | INFO     | [data] copytool_out thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:40,089 | INFO     | [data] copytool_in thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:40,227 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:41,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 03:19:14] 2025-07-05 01:18:45,261 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 03:19:14] 2025-07-05 01:18:45,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626007406400)>', '<ExcThread(monitor, started 140625039042304)>']
[2025-07-05 03:19:14] 2025-07-05 01:18:45,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 03:19:14] 2025-07-05 01:18:45,895 | INFO     | [monitor] control thread has ended
[2025-07-05 03:19:14] 2025-07-05 01:18:50,630 | INFO     | all workflow threads have been joined
[2025-07-05 03:19:14] 2025-07-05 01:18:50,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 03:19:14] 2025-07-05 01:18:50,631 | INFO     | traces error code: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:50,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 03:19:14] 2025-07-05 01:18:50,708 [wrapper] ==== pilot stdout END ====
[2025-07-05 03:19:14] 2025-07-05 01:18:50,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 03:19:14] 2025-07-05 01:18:50,716 [wrapper] pilotpid: 71785
[2025-07-05 03:19:14] 2025-07-05 01:18:50,720 [wrapper] Pilot exit status: 0
[2025-07-05 03:19:14] 2025-07-05 01:18:50,732 [wrapper] pandaids: 6720535249
[2025-07-05 03:19:14] 2025-07-05 01:18:50,754 [wrapper] cleanup supervisor_pilot   90744 71786
[2025-07-05 03:19:14] 2025-07-05 01:18:50,758 [wrapper] Test setup, not cleaning
[2025-07-05 03:19:14] 2025-07-05 01:18:50,762 [wrapper] apfmon messages muted
[2025-07-05 03:19:14] 2025-07-05 01:18:50,765 [wrapper] ==== wrapper stdout END ====
[2025-07-05 03:19:14] 2025-07-05 01:18:50,769 [wrapper] ==== wrapper stderr END ====
[2025-07-05 03:19:14]  *** Error codes and diagnostics ***
[2025-07-05 03:19:14]     "exeErrorCode": 0,
[2025-07-05 03:19:14]     "exeErrorDiag": "",
[2025-07-05 03:19:14]     "pilotErrorCode": 0,
[2025-07-05 03:19:14]     "pilotErrorDiag": "",
[2025-07-05 03:19:14]  *** Listing of results directory ***
[2025-07-05 03:19:14] total 570984
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc      5112 Jul  4 22:23 queuedata.json
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc    530466 Jul  4 22:23 pilot3.tar.gz
[2025-07-05 03:19:14] -rwx------ 1 boinc boinc     36292 Jul  4 22:23 runpilot2-wrapper.sh
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc       100 Jul  5 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 03:19:14] -rwxr-xr-x 1 boinc boinc      7986 Jul  5 01:39 run_atlas
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc       105 Jul  5 01:39 job.xml
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc 316318460 Jul  5 01:39 EVNT.45482038._000043.pool.root.1
[2025-07-05 03:19:14] drwxrwx--x 2 boinc boinc      4096 Jul  5 01:39 shared
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc    542881 Jul  5 01:39 input.tar.gz
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc     15095 Jul  5 01:39 start_atlas.sh
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc         0 Jul  5 01:39 boinc_setup_complete
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc      6380 Jul  5 01:39 init_data.xml
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc         0 Jul  5 01:39 boinc_lockfile
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc      2543 Jul  5 01:39 pandaJob.out
[2025-07-05 03:19:14] -rw------- 1 boinc boinc    966317 Jul  5 01:39 agis_schedconf.cvmfs.json
[2025-07-05 03:19:14] -rw------- 1 boinc boinc   1574083 Jul  5 01:39 agis_ddmendpoints.agis.ALL.json
[2025-07-05 03:19:14] drwx------ 4 boinc boinc      4096 Jul  5 01:39 pilot3
[2025-07-05 03:19:14] -rw------- 1 boinc boinc 262856427 Jul  5 03:18 HITS.45482040._001069.pool.root.1
[2025-07-05 03:19:14] -rw------- 1 boinc boinc        95 Jul  5 03:18 pilot_heartbeat.json
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc       529 Jul  5 03:18 boinc_task_state.xml
[2025-07-05 03:19:14] -rw------- 1 boinc boinc      1024 Jul  5 03:18 memory_monitor_summary.json
[2025-07-05 03:19:14] -rw------- 1 boinc boinc    264101 Jul  5 03:18 log.45482040._001069.job.log.tgz.1
[2025-07-05 03:19:14] -rw------- 1 boinc boinc      7778 Jul  5 03:18 heartbeat.json
[2025-07-05 03:19:14] -rw------- 1 boinc boinc      4670 Jul  5 03:18 pilotlog.txt
[2025-07-05 03:19:14] -rw------- 1 boinc boinc    567038 Jul  5 03:18 log.45482040._001069.job.log.1
[2025-07-05 03:19:14] -rw------- 1 boinc boinc       357 Jul  5 03:18 output.list
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc       620 Jul  5 03:18 runtime_log
[2025-07-05 03:19:14] -rw------- 1 boinc boinc    849920 Jul  5 03:18 result.tar.gz
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc      8739 Jul  5 03:18 runtime_log.err
[2025-07-05 03:19:14] -rw------- 1 boinc boinc       660 Jul  5 03:18 lDwMDmi71r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTI8KDmU5q7Qo.diag
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc      8192 Jul  5 03:19 boinc_mmap_file
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc        27 Jul  5 03:19 wrapper_checkpoint.txt
[2025-07-05 03:19:14] -rw-r--r-- 1 boinc boinc     21584 Jul  5 03:19 stderr.txt
[2025-07-05 03:19:14] HITS file was successfully produced:
[2025-07-05 03:19:14] -rw------- 1 boinc boinc 262856427 Jul  5 03:18 shared/HITS.pool.root.1
[2025-07-05 03:19:14]  *** Contents of shared directory: ***
[2025-07-05 03:19:14] total 566992
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc 316318460 Jul  5 01:39 ATLAS.root_0
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc    542881 Jul  5 01:39 input.tar.gz
[2025-07-05 03:19:14] -rw-r--r-- 2 boinc boinc     15095 Jul  5 01:39 start_atlas.sh
[2025-07-05 03:19:14] -rw------- 1 boinc boinc 262856427 Jul  5 03:18 HITS.pool.root.1
[2025-07-05 03:19:14] -rw------- 1 boinc boinc    849920 Jul  5 03:18 result.tar.gz
03:19:16 (68083): run_atlas exited; CPU time 22710.720660
03:19:16 (68083): called boinc_finish(0)

</stderr_txt>
]]>

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