Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:45:51 (1844436): wrapper (7.7.26015): starting
01:45:51 (1844436): wrapper: running run_atlas (--nthreads 4)
[2025-07-05 01:45:51] Arguments: --nthreads 4
[2025-07-05 01:45:51] Threads: 4
[2025-07-05 01:45:51] Checking for CVMFS
[2025-07-05 01:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 01:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 01:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 01:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 01:45:51] 2.9.2.0 1761399 277 61196 147945 2 56 32252196 36864001 0 130560 0 216639 99.981 12218 8161 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-05 01:45:51] CVMFS is ok
[2025-07-05 01:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 01:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 01:45:51] Further information can be found at the LHC@home message board.
[2025-07-05 01:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 01:45:51] Checking for apptainer binary...
[2025-07-05 01:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 01:45:51] Running /usr/bin/apptainer --version
[2025-07-05 01:45:51] apptainer version 1.4.1-1.1
[2025-07-05 01:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 01:45:51] magicA244a
[2025-07-05 01:45:51] apptainer works
[2025-07-05 01:45:51] Set ATHENA_PROC_NUMBER=4
[2025-07-05 01:45:51] Set ATHENA_CORE_NUMBER=4
[2025-07-05 01:45:51] Starting ATLAS job with PandaID=6720419176
[2025-07-05 01:45:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 03:18:17]  *** The last 200 lines of the pilot log: ***
[2025-07-05 03:18:17]  lfn=log.45482148._003492.job.log.tgz.1
[2025-07-05 03:18:17]  mtime=0
[2025-07-05 03:18:17]  protocol_id=None
[2025-07-05 03:18:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-05 03:18:17]  replicas=None
[2025-07-05 03:18:17]  scope=mc23_13p6TeV
[2025-07-05 03:18:17]  status=None
[2025-07-05 03:18:17]  status_code=0
[2025-07-05 03:18:17]  storage_token=
[2025-07-05 03:18:17]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6720419176/log.45482148._003492.job.log.tgz.1
[2025-07-05 03:18:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/d3/log.45482148._003492.job.log.tgz.1
[2025-07-05 03:18:17]  workdir=None
[2025-07-05 03:18:17] ]
[2025-07-05 03:18:17] 2025-07-05 01:17:39,566 | INFO     | transferring file log.45482148._003492.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6720419176/log.45482148._003492.job.log.tgz.1 to /local/data/boinc/
[2025-07-05 03:18:17] 2025-07-05 01:17:39,566 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6720419176/log.45482148._003492.job.log.tgz.1 /local/data/boinc/slots/0/log.45482148._0034
[2025-07-05 03:18:17] 2025-07-05 01:17:39,580 | INFO     | adding to output.list: log.45482148._003492.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/d3/log.45482148._003492.job.log.tg
[2025-07-05 03:18:17] 2025-07-05 01:17:39,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-05 03:18:17] 2025-07-05 01:17:39,581 | INFO     | summary of transferred files:
[2025-07-05 03:18:17] 2025-07-05 01:17:39,581 | INFO     |  -- lfn=log.45482148._003492.job.log.tgz.1, status_code=0, status=transferred
[2025-07-05 03:18:17] 2025-07-05 01:17:39,581 | INFO     | stage-out finished correctly
[2025-07-05 03:18:17] 2025-07-05 01:17:40,236 | WARNING  | process 1854743 can no longer be monitored (due to stat problems) - aborting
[2025-07-05 03:18:17] 2025-07-05 01:17:40,236 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6720419176/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 03:18:17] 2025-07-05 01:17:40,272 | INFO     | number of running child processes to parent process 1854743: 1
[2025-07-05 03:18:17] 2025-07-05 01:17:40,272 | INFO     | maximum number of monitored processes: 6
[2025-07-05 03:18:17] 2025-07-05 01:17:41,896 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-05 03:18:17] 2025-07-05 01:17:42,689 | INFO     | job 6720419176 has state=finished
[2025-07-05 03:18:17] 2025-07-05 01:17:42,689 | INFO     | preparing for final server update for job 6720419176 in state='finished'
[2025-07-05 03:18:17] 2025-07-05 01:17:42,689 | INFO     | this job has now completed (state=finished)
[2025-07-05 03:18:17] 2025-07-05 01:17:42,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-05 03:18:17] 2025-07-05 01:17:42,690 | INFO     | log transfer has been attempted: DONE
[2025-07-05 03:18:17] 2025-07-05 01:17:42,690 | INFO     | job 6720419176 has finished - writing final server update
[2025-07-05 03:18:17] 2025-07-05 01:17:42,690 | INFO     | total number of processed events: 400 (read)
[2025-07-05 03:18:17] 2025-07-05 01:17:42,690 | INFO     | executing command: lscpu
[2025-07-05 03:18:17] 2025-07-05 01:17:42,706 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-05 03:18:17] 2025-07-05 01:17:42,763 | INFO     | PID=1848135 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 03:18:17] 2025-07-05 01:17:42,776 | INFO     | monitor loop #423: job 0:6720419176 is in state 'finished'
[2025-07-05 03:18:17] 2025-07-05 01:17:42,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,116 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-05 03:18:17] 2025-07-05 01:17:45,117 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3650.5316249999996
[2025-07-05 03:18:17] 2025-07-05 01:17:45,118 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6720419176/memory_monitor_summary.json (trf name=prmon)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,118 | INFO     | extracted standard info from prmon json
[2025-07-05 03:18:17] 2025-07-05 01:17:45,118 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 03:18:17] 2025-07-05 01:17:45,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 03:18:17] 2025-07-05 01:17:45,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 03:18:17] 2025-07-05 01:17:45,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 03:18:17] 2025-07-05 01:17:45,119 | INFO     | fitting pss+swap vs Time
[2025-07-05 03:18:17] 2025-07-05 01:17:45,119 | INFO     | sum of square deviations: 177275882.0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,119 | INFO     | sum of deviations: -10276928579.0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | mean x: 1751675583.0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | mean y: 2513996.734939759
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | -- intersect: 101549575317.0627
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | intersect: 101549575317.0627
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | chi2: 0.07915878893750308
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | -- intersect: 101549575317.0627
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | current memory leak: -57.97 B/s (using 83 data points, chi2=0.08)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | could have reported an average CPU frequency of 3881 MHz (7 samples)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | ..............................
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . Timing measurements:
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . get job = 0 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . initial setup = 1 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . payload setup = 3 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . stage-in = 0 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . payload execution = 5481 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . stage-out = 0 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | . log creation = 0 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,120 | INFO     | ..............................
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | 
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | job summary report
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | --------------------------------------------------
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | PanDA job id: 6720419176
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | task id: 45482148
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | errors: (none)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | pilot state: finished 
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | transexitcode: 0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | exeerrorcode: 0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | exeerrordiag: 
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | exitcode: 0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | exitmsg: OK
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | cpuconsumptiontime: 20814 s
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | nevents: 400
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | neventsw: 0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | pid: 1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | pgrp: 1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | corecount: 4
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | event service: False
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | sizes: {0: 2366639, 2: 2366901, 11: 2366929, 5489: 2402675, 5491: 2402675, 5495: 2402869}
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | --------------------------------------------------
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | 
[2025-07-05 03:18:17] 2025-07-05 01:17:45,151 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-05 03:18:17] 2025-07-05 01:17:45,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | job 6720419176 has completed (purged errors)
[2025-07-05 03:18:17] 2025-07-05 01:17:45,165 | INFO     | overall cleanup function is called
[2025-07-05 03:18:17] 2025-07-05 01:17:46,171 | INFO     | --- collectZombieJob: --- 10, [1854743]
[2025-07-05 03:18:17] 2025-07-05 01:17:46,172 | INFO     | zombie collector waiting for pid 1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:46,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 03:18:17] 2025-07-05 01:17:46,172 | INFO     | collected zombie processes
[2025-07-05 03:18:17] 2025-07-05 01:17:46,172 | INFO     | will attempt to kill all subprocesses of pid=1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:46,214 | INFO     | process IDs to be killed: [1854743] (in reverse order)
[2025-07-05 03:18:17] 2025-07-05 01:17:46,240 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 03:18:17] 2025-07-05 01:17:46,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 03:18:17] 2025-07-05 01:17:46,242 | INFO     | did not find any defunct processes belonging to 1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:46,243 | INFO     | did not find any defunct processes belonging to 1854743
[2025-07-05 03:18:17] 2025-07-05 01:17:46,243 | INFO     | ready for new job
[2025-07-05 03:18:17] 2025-07-05 01:17:46,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | ***************************************
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | ***************************************
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | 
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | architecture information:
[2025-07-05 03:18:17] 2025-07-05 01:17:46,244 | INFO     | executing command: cat /etc/os-release
[2025-07-05 03:18:17] 2025-07-05 01:17:46,254 | INFO     | cat /etc/os-release:
[2025-07-05 03:18:17] NAME="CentOS Linux"
[2025-07-05 03:18:17] VERSION="7 (Core)"
[2025-07-05 03:18:17] ID="centos"
[2025-07-05 03:18:17] ID_LIKE="rhel fedora"
[2025-07-05 03:18:17] VERSION_ID="7"
[2025-07-05 03:18:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 03:18:17] ANSI_COLOR="0;31"
[2025-07-05 03:18:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 03:18:17] HOME_URL="https://www.centos.org/"
[2025-07-05 03:18:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 03:18:17] 
[2025-07-05 03:18:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 03:18:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 03:18:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 03:18:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 03:18:17] 
[2025-07-05 03:18:17] 2025-07-05 01:17:46,254 | INFO     | ***************************************
[2025-07-05 03:18:17] 2025-07-05 01:17:46,757 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-05 03:18:17] 2025-07-05 01:17:46,770 | INFO     | sufficient remaining disk space (322997059584 B)
[2025-07-05 03:18:17] 2025-07-05 01:17:46,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | INFO     | update_server=False
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 03:18:17] 2025-07-05 01:17:46,771 | INFO     | aborting loop
[2025-07-05 03:18:17] 2025-07-05 01:17:46,905 | INFO     | all job control threads have been joined
[2025-07-05 03:18:17] 2025-07-05 01:17:47,094 | INFO     | all data control threads have been joined
[2025-07-05 03:18:17] 2025-07-05 01:17:47,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 03:18:17] 2025-07-05 01:17:47,773 | INFO     | [job] retrieve thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:47,776 | INFO     | [job] job monitor thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:47,776 | INFO     | [job] queue monitor thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:47,911 | INFO     | [job] control thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:47,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 03:18:17] 2025-07-05 01:17:48,100 | INFO     | [data] control thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:48,116 | INFO     | [data] copytool_in thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:48,230 | INFO     | all payload control threads have been joined
[2025-07-05 03:18:17] 2025-07-05 01:17:48,278 | INFO     | [payload] validate_post thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:48,490 | INFO     | [job] validate thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:48,518 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:48,607 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:49,088 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:49,236 | INFO     | [payload] control thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:49,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:49,361 | INFO     | [payload] failed_post thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:49,627 | INFO     | [data] copytool_out thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:51,941 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 03:18:17] 2025-07-05 01:17:52,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847061378880)>', '<ExcThread(monitor, started 139846181959424)>']
[2025-07-05 03:18:17] 2025-07-05 01:17:57,479 | INFO     | all workflow threads have been joined
[2025-07-05 03:18:17] 2025-07-05 01:17:57,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 03:18:17] 2025-07-05 01:17:57,479 | INFO     | traces error code: 0
[2025-07-05 03:18:17] 2025-07-05 01:17:57,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | INFO     | PID=1848135 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | CRITICAL | thread 'MainThread' is not alive
[2025-07-05 03:18:17] 2025-07-05 01:18:16,902 | INFO     | [monitor] control thread has ended
[2025-07-05 03:18:17] 2025-07-05 01:18:16,952 [wrapper] ==== pilot stdout END ====
[2025-07-05 03:18:17] 2025-07-05 01:18:16,955 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 03:18:17] 2025-07-05 01:18:16,957 [wrapper] pilotpid: 1848135
[2025-07-05 03:18:17] 2025-07-05 01:18:16,960 [wrapper] Pilot exit status: 0
[2025-07-05 03:18:17] 2025-07-05 01:18:16,967 [wrapper] pandaids: 6720419176
[2025-07-05 03:18:17] 2025-07-05 01:18:16,984 [wrapper] cleanup supervisor_pilot 1867492 1848136
[2025-07-05 03:18:17] 2025-07-05 01:18:16,987 [wrapper] Test setup, not cleaning
[2025-07-05 03:18:17] 2025-07-05 01:18:16,989 [wrapper] apfmon messages muted
[2025-07-05 03:18:17] 2025-07-05 01:18:16,992 [wrapper] ==== wrapper stdout END ====
[2025-07-05 03:18:17] 2025-07-05 01:18:16,994 [wrapper] ==== wrapper stderr END ====
[2025-07-05 03:18:17]  *** Error codes and diagnostics ***
[2025-07-05 03:18:17]     "exeErrorCode": 0,
[2025-07-05 03:18:17]     "exeErrorDiag": "",
[2025-07-05 03:18:17]     "pilotErrorCode": 0,
[2025-07-05 03:18:17]     "pilotErrorDiag": "",
[2025-07-05 03:18:17]  *** Listing of results directory ***
[2025-07-05 03:18:17] total 584836
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc    530466 Jul  4 20:31 pilot3.tar.gz
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc      5112 Jul  4 20:51 queuedata.json
[2025-07-05 03:18:17] -rwx------ 1 boinc boinc     36292 Jul  4 20:54 runpilot2-wrapper.sh
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc       100 Jul  5 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 03:18:17] -rwxr-xr-x 1 boinc boinc      7986 Jul  5 01:45 run_atlas
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc       105 Jul  5 01:45 job.xml
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc 322557860 Jul  5 01:45 EVNT.45482146._000140.pool.root.1
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc    542906 Jul  5 01:45 input.tar.gz
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc     15095 Jul  5 01:45 start_atlas.sh
[2025-07-05 03:18:17] drwxrwx--x 2 boinc boinc      4096 Jul  5 01:45 shared
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc         0 Jul  5 01:45 boinc_setup_complete
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc      6515 Jul  5 01:45 init_data.xml
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc         0 Jul  5 01:45 boinc_lockfile
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc      2615 Jul  5 01:45 pandaJob.out
[2025-07-05 03:18:17] -rw------- 1 boinc boinc    966317 Jul  5 01:45 agis_schedconf.cvmfs.json
[2025-07-05 03:18:17] -rw------- 1 boinc boinc   1574083 Jul  5 01:45 agis_ddmendpoints.agis.ALL.json
[2025-07-05 03:18:17] drwx------ 4 boinc boinc      4096 Jul  5 01:45 pilot3
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc       529 Jul  5 03:17 boinc_task_state.xml
[2025-07-05 03:18:17] -rw------- 1 boinc boinc 270892641 Jul  5 03:17 HITS.45482148._003492.pool.root.1
[2025-07-05 03:18:17] -rw------- 1 boinc boinc        95 Jul  5 03:17 pilot_heartbeat.json
[2025-07-05 03:18:17] -rw------- 1 boinc boinc      1031 Jul  5 03:17 memory_monitor_summary.json
[2025-07-05 03:18:17] -rw------- 1 boinc boinc    254841 Jul  5 03:17 log.45482148._003492.job.log.tgz.1
[2025-07-05 03:18:17] -rw------- 1 boinc boinc      7754 Jul  5 03:17 heartbeat.json
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc        27 Jul  5 03:17 wrapper_checkpoint.txt
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc      8192 Jul  5 03:17 boinc_mmap_file
[2025-07-05 03:18:17] -rw------- 1 boinc boinc       817 Jul  5 03:18 pilotlog.txt
[2025-07-05 03:18:17] -rw------- 1 boinc boinc    531712 Jul  5 03:18 log.45482148._003492.job.log.1
[2025-07-05 03:18:17] -rw------- 1 boinc boinc       357 Jul  5 03:18 output.list
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc       620 Jul  5 03:18 runtime_log
[2025-07-05 03:18:17] -rw------- 1 boinc boinc    808960 Jul  5 03:18 result.tar.gz
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc      8754 Jul  5 03:18 runtime_log.err
[2025-07-05 03:18:17] -rw------- 1 boinc boinc       662 Jul  5 03:18 iYUMDmcj0r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEn7KDmRGJ73m.diag
[2025-07-05 03:18:17] -rw-r--r-- 1 boinc boinc     21750 Jul  5 03:18 stderr.txt
[2025-07-05 03:18:17] HITS file was successfully produced:
[2025-07-05 03:18:17] -rw------- 1 boinc boinc 270892641 Jul  5 03:17 shared/HITS.pool.root.1
[2025-07-05 03:18:17]  *** Contents of shared directory: ***
[2025-07-05 03:18:17] total 580892
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc 322557860 Jul  5 01:45 ATLAS.root_0
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc    542906 Jul  5 01:45 input.tar.gz
[2025-07-05 03:18:17] -rw-r--r-- 2 boinc boinc     15095 Jul  5 01:45 start_atlas.sh
[2025-07-05 03:18:17] -rw------- 1 boinc boinc 270892641 Jul  5 03:17 HITS.pool.root.1
[2025-07-05 03:18:17] -rw------- 1 boinc boinc    808960 Jul  5 03:18 result.tar.gz
03:18:18 (1844436): run_atlas exited; CPU time 20833.336991
03:18:18 (1844436): called boinc_finish(0)

</stderr_txt>
]]>

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