Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-04 17:06:30 (35336): Detected: vboxwrapper 26206
2025-07-04 17:06:30 (35336): Detected: BOINC client v8.2.4
2025-07-04 17:06:31 (35336): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-04 17:06:31 (35336): Successfully copied 'init_data.xml' to the shared directory.
2025-07-04 17:06:32 (35336): Create VM. (boinc_0f1e8bafa54f0c97, slot#41)
2025-07-04 17:06:32 (35336): Setting Memory Size for VM. (4096MB)
2025-07-04 17:06:33 (35336): Setting CPU Count for VM. (1)
2025-07-04 17:06:33 (35336): Setting Chipset Options for VM.
2025-07-04 17:06:33 (35336): Setting Graphics Controller Options for VM.
2025-07-04 17:06:33 (35336): Setting Boot Options for VM.
2025-07-04 17:06:34 (35336): Setting Network Configuration for NAT.
2025-07-04 17:06:34 (35336): Enabling VM Network Access.
2025-07-04 17:06:34 (35336): Disabling USB Support for VM.
2025-07-04 17:06:34 (35336): Disabling COM Port Support for VM.
2025-07-04 17:06:35 (35336): Disabling LPT Port Support for VM.
2025-07-04 17:06:35 (35336): Disabling Audio Support for VM.
2025-07-04 17:06:35 (35336): Disabling Clipboard Support for VM.
2025-07-04 17:06:35 (35336): Disabling Drag and Drop Support for VM.
2025-07-04 17:06:36 (35336): Adding storage controller(s) to VM.
2025-07-04 17:06:36 (35336): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-04 17:06:39 (35336): Adding VirtualBox Guest Additions to VM.
2025-07-04 17:06:39 (35336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-04 17:06:39 (35336): forwarding host port 63331 to guest port 80
2025-07-04 17:06:40 (35336): Enabling remote desktop for VM.
2025-07-04 17:06:40 (35336): Required extension pack not installed, remote desktop not enabled.
2025-07-04 17:06:40 (35336): Enabling shared directory for VM.
2025-07-04 17:06:40 (35336): Starting VM using VBoxManage interface. (boinc_0f1e8bafa54f0c97, slot#41)
2025-07-04 17:06:45 (35336): Successfully started VM. (PID = '36668')
2025-07-04 17:06:45 (35336): Reporting VM Process ID to BOINC.
2025-07-04 17:06:45 (35336): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-04 17:06:45 (35336): Guest Log: CPUID EDX: 0x178bfbff
2025-07-04 17:06:45 (35336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-04 17:06:45 (35336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-04 17:06:45 (35336): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-04 17:06:45 (35336): Detected: Web Application Enabled (http://localhost:63331)
2025-07-04 17:06:45 (35336): Preference change detected
2025-07-04 17:06:45 (35336): Setting CPU throttle for VM. (100%)
2025-07-04 17:06:45 (35336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-04 17:06:47 (35336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-04 17:06:47 (35336): Guest Log: BIOS: Booting from Hard Disk...
2025-07-04 17:06:49 (35336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-04 17:06:49 (35336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-04 17:06:49 (35336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-04 17:06:52 (35336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-04 17:06:52 (35336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-04 17:06:57 (35336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000065 main     Log opened 2025-07-04T17:06:55.290989000Z
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000138 main     OS Product: Linux
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000153 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000164 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000175 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000175 main     Process ID: 1242
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000176 main     Package type: LINUX_64BITS_GENERIC
2025-07-04 17:06:57 (35336): Guest Log: 00:00:00.000521 main     5.2.32 r132073 started. Verbose level = 0
2025-07-04 17:06:57 (35336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-04 17:06:57 (35336): Guest Log: [INFO] Mounting shared directory
2025-07-04 17:06:57 (35336): Guest Log: [INFO] Checking for init_data.xml
2025-07-04 17:06:58 (35336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-04 17:06:58 (35336): Guest Log: [INFO] Detected branch: prod
2025-07-04 17:06:58 (35336): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-04 17:06:58 (35336): Guest Log: Copying input files
2025-07-04 17:06:59 (35336): Guest Log: Copied input files into RunAtlas.
2025-07-04 17:06:59 (35336): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-04 17:07:07 (35336): Guest Log: 00:00:10.008624 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 766 326 000ns (GuestNow=1 751 641 626 532 590 000 ns GuestLast=1 751 648 815 298 916 000 ns fSetTimeLastLoop=true )
2025-07-04 17:07:12 (35336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-04 17:07:12 (35336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-04 17:07:12 (35336): Guest Log: 2.6.3.0 1512 0 29520 147929 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-04 17:07:12 (35336): Guest Log: copied the webapp to /var/www
2025-07-04 17:07:13 (35336): Guest Log: core_number=1
2025-07-04 17:07:13 (35336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-04 17:07:13 (35336): Guest Log:  *** Starting ATLAS job. (PandaID=6720217757 taskID=45481997) ***
2025-07-04 18:46:47 (35336): Status Report: Elapsed Time: '6000.000000'
2025-07-04 18:46:47 (35336): Status Report: CPU Time: '5781.671875'
2025-07-04 20:26:50 (35336): Status Report: Elapsed Time: '12000.000000'
2025-07-04 20:26:50 (35336): Status Report: CPU Time: '11755.375000'
2025-07-04 22:06:53 (35336): Status Report: Elapsed Time: '18000.000000'
2025-07-04 22:06:53 (35336): Status Report: CPU Time: '17729.078125'
2025-07-04 23:46:56 (35336): Status Report: Elapsed Time: '24000.000000'
2025-07-04 23:46:56 (35336): Status Report: CPU Time: '23702.281250'
2025-07-05 01:26:58 (35336): Status Report: Elapsed Time: '30000.000000'
2025-07-05 01:26:58 (35336): Status Report: CPU Time: '29678.390625'
2025-07-05 03:07:01 (35336): Status Report: Elapsed Time: '36000.000000'
2025-07-05 03:07:01 (35336): Status Report: CPU Time: '35653.562500'
2025-07-05 04:18:01 (35336): Guest Log:  *** Job finished ***
2025-07-05 04:18:01 (35336): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:37,865 | INFO     | [job] control thread has finished
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:38,137 | INFO     | [payload] execute_payloads thread has finished
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:39,646 | INFO     | [data] queue_monitor thread has finished
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:41,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187454420800)>', '<ExcThread(monitor, started 140187145312000)>']
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:41,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:41,651 | INFO     | [monitor] control thread has ended
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,097 | INFO     | all workflow threads have been joined
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,097 | INFO     | end of generic workflow (traces error code: 0)
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,097 | INFO     | traces error code: 0
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,170 [wrapper] ==== pilot stdout END ====
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,172 [wrapper] ==== wrapper stdout RESUME ====
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,174 [wrapper] pilotpid: 5771
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,176 [wrapper] Pilot exit status: 0
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,211 [wrapper] pandaids: 6720217757
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,223 [wrapper] cleanup supervisor_pilot 22617 5772
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,225 [wrapper] Test setup, not cleaning
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,226 [wrapper] apfmon messages muted
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,228 [wrapper] ==== wrapper stdout END ====
2025-07-05 04:18:01 (35336): Guest Log: 2025-07-05 02:17:46,230 [wrapper] ==== wrapper stderr END ====
2025-07-05 04:18:01 (35336): Guest Log:  *** Error codes and diagnostics ***
2025-07-05 04:18:01 (35336): Guest Log:     "exeErrorCode": 0,
2025-07-05 04:18:01 (35336): Guest Log:     "exeErrorDiag": "",
2025-07-05 04:18:01 (35336): Guest Log:     "pilotErrorCode": 0,
2025-07-05 04:18:01 (35336): Guest Log:     "pilotErrorDiag": "",
2025-07-05 04:18:01 (35336): Guest Log:  *** Listing of results directory ***
2025-07-05 04:18:01 (35336): Guest Log: total 285356
2025-07-05 04:18:01 (35336): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul  4 14:22 pilot3.tar.gz
2025-07-05 04:18:01 (35336): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul  4 15:02 queuedata.json
2025-07-05 04:18:01 (35336): Guest Log: -rwx------. 1 atlas atlas     36292 Jul  4 15:05 runpilot2-wrapper.sh
2025-07-05 04:18:01 (35336): Guest Log: -rwxr-xr-x. 1 atlas atlas      9451 Jul  4 15:06 init_data.xml
2025-07-05 04:18:01 (35336): Guest Log: -rwxr-xr-x. 1 atlas atlas    542881 Jul  4 15:06 input.tar.gz
2025-07-05 04:18:01 (35336): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul  4 15:06 start_atlas.sh
2025-07-05 04:18:01 (35336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul  4 15:06 EVNT.45481995._000008.pool.root.1 -> /data/./ATLAS.root_0
2025-07-05 04:18:01 (35336): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jul  4 15:07 pandaJob.out
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas    966193 Jul  4 15:07 agis_schedconf.cvmfs.json
2025-07-05 04:18:01 (35336): Guest Log: drwx------. 4 atlas atlas      4096 Jul  4 15:07 pilot3
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas 280214139 Jul  5 02:17 HITS.45481997._000194.pool.root.1
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas        95 Jul  5 02:17 pilot_heartbeat.json
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas      1021 Jul  5 02:17 memory_monitor_summary.json
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas   1574083 Jul  5 02:17 agis_ddmendpoints.agis.ALL.json
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas    530181 Jul  5 02:17 log.45481997._000194.job.log.tgz.1
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas      7761 Jul  5 02:17 heartbeat.json
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas      4540 Jul  5 02:17 pilotlog.txt
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas   3572991 Jul  5 02:17 log.45481997._000194.job.log.1
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas       357 Jul  5 02:17 output.list
2025-07-05 04:18:01 (35336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul  5 02:17 runtime_log
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas   4126720 Jul  5 02:17 result.tar.gz
2025-07-05 04:18:01 (35336): Guest Log: -rw-r--r--. 1 atlas atlas      8466 Jul  5 02:17 runtime_log.err
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas       658 Jul  5 02:17 JA2MDmHAxr7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmwmKDmo33mYm.diag
2025-07-05 04:18:01 (35336): Guest Log: Looking for outputfile HITS.45481997._000194.pool.root.1
2025-07-05 04:18:01 (35336): Guest Log: HITS file was successfully produced
2025-07-05 04:18:01 (35336): Guest Log: -rw-------. 1 atlas atlas 280214139 Jul  5 02:17 /home/atlas/RunAtlas/HITS.45481997._000194.pool.root.1
2025-07-05 04:18:02 (35336): Guest Log: Successfully finished the ATLAS job!
2025-07-05 04:18:02 (35336): Guest Log: Copying the results back to the shared directory!
2025-07-05 04:18:02 (35336): Guest Log:  *** Contents of shared directory: ***
2025-07-05 04:18:02 (35336): Guest Log: total 600916
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root 330418391 Jul  4 15:06 ATLAS.root_0
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root 280214139 Jul  5  2025 HITS.pool.root.1
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root      9451 Jul  4 15:06 init_data.xml
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root    542881 Jul  4 15:06 input.tar.gz
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root   4126720 Jul  5  2025 result.tar.gz
2025-07-05 04:18:02 (35336): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul  4 15:06 start_atlas.sh
2025-07-05 04:18:02 (35336): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-05 04:18:02 (35336): VM Completion File Detected.
2025-07-05 04:18:02 (35336): Powering off VM.
2025-07-05 04:18:02 (35336): Successfully stopped VM.
2025-07-05 04:18:02 (35336): Deregistering VM. (boinc_0f1e8bafa54f0c97, slot#41)
2025-07-05 04:18:02 (35336): Removing network bandwidth throttle group from VM.
2025-07-05 04:18:03 (35336): Removing VM from VirtualBox.
04:18:08 (35336): called boinc_finish(0)

</stderr_txt>
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