Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:39 (369933): wrapper (7.7.26015): starting
15:35:39 (369933): wrapper: running run_atlas (--nthreads 4)
[2025-07-03 15:35:39] Arguments: --nthreads 4
[2025-07-03 15:35:39] Threads: 4
[2025-07-03 15:35:39] Checking for CVMFS
[2025-07-03 15:35:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-03 15:35:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-03 15:35:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-03 15:35:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-03 15:35:42] 2.9.2.0 370129 0 29792 147884 3 1 29754647 36864000 0 130560 0 0 0.000 1291 1249 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-03 15:35:42] CVMFS is ok
[2025-07-03 15:35:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-03 15:35:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-03 15:35:42] Further information can be found at the LHC@home message board.
[2025-07-03 15:35:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-03 15:35:42] Checking for apptainer binary...
[2025-07-03 15:35:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-03 15:35:42] Running /usr/bin/apptainer --version
[2025-07-03 15:35:42] apptainer version 1.4.1-1.1
[2025-07-03 15:35:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-03 15:35:42] thA350a
[2025-07-03 15:35:42] apptainer works
[2025-07-03 15:35:42] Set ATHENA_PROC_NUMBER=4
[2025-07-03 15:35:42] Set ATHENA_CORE_NUMBER=4
[2025-07-03 15:35:42] Starting ATLAS job with PandaID=6716558275
[2025-07-03 15:35:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-03 18:36:33]  *** The last 200 lines of the pilot log: ***
[2025-07-03 18:36:33] 2025-07-03 16:35:55,125 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-03 18:36:33] 2025-07-03 16:35:56,995 | INFO     | monitor loop #824: job 0:6716558275 is in state 'finished'
[2025-07-03 18:36:33] 2025-07-03 16:35:56,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-03 18:36:33] 2025-07-03 16:35:59,499 | INFO     | monitor loop #825: job 0:6716558275 is in state 'finished'
[2025-07-03 18:36:33] 2025-07-03 16:35:59,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,463 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-03 18:36:33] 2025-07-03 16:36:00,465 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3539.8539375
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6716558275/memory_monitor_summary.json (trf name=prmon)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | INFO     | extracted standard info from prmon json
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | INFO     | extracted standard memory fields from prmon json
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-03 18:36:33] 2025-07-03 16:36:00,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | fitting pss+swap vs Time
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | sum of square deviations: 1719429448.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | sum of deviations: -20786054939.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | mean x: 1751555146.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | mean y: 2453396.8757062145
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | -- intersect: 21176873513.84707
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | intersect: 21176873513.84707
[2025-07-03 18:36:33] 2025-07-03 16:36:00,469 | INFO     | chi2: 1.6416421989202956
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | sum of square deviations: 1577789583.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | sum of deviations: -19615555158.00001
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | mean x: 1751554993.5
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | mean y: 2454657.465116279
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | -- intersect: 21778313718.431927
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | intersect: 21778313718.431927
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | chi2: 1.6397828880685201
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | current chi2=1.6397828880685201 (change=0.1132592018527759 %)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | right removable region: 171
[2025-07-03 18:36:33] 2025-07-03 16:36:00,470 | INFO     | sum of square deviations: 1577789583.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | sum of deviations: -45561250689.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | mean x: 1751555298.5
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | mean y: 2479665.697674419
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | -- intersect: 50581499143.61036
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | intersect: 50581499143.61036
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | chi2: 0.13181516560512335
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | current chi2=0.13181516560512335 (change=91.97053013794249 %)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,471 | INFO     | sum of square deviations: 1444149868.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | sum of deviations: -39100887089.000015
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | mean x: 1751555451.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | mean y: 2472267.0658682636
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | -- intersect: 47426478208.02926
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | intersect: 47426478208.02926
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | chi2: 0.12028564685776405
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | current chi2=0.12028564685776405 (change=8.746731602870419 %)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | left removable region: 20
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | sum of square deviations: 1067554900.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | sum of deviations: -29074287870.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | mean x: 1751555573.0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | mean y: 2463698.562913907
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | -- intersect: 47705144796.93528
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | intersect: 47705144796.93528
[2025-07-03 18:36:33] 2025-07-03 16:36:00,472 | INFO     | chi2: 0.1095151966372602
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | -- intersect: 47705144796.93528
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | current memory leak: -27.23 B/s (using 151 data points, chi2=0.11)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | could have reported an average CPU frequency of 3727 MHz (9 samples)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | ..............................
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . Timing measurements:
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . get job = 0 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . initial setup = 1 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . payload setup = 5 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . stage-in = 0 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . payload execution = 10774 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . stage-out = 0 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | . log creation = 0 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,473 | INFO     | ..............................
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | 
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | job summary report
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | --------------------------------------------------
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | PanDA job id: 6716558275
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | task id: 45435989
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | errors: (none)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | pilot state: finished 
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | transexitcode: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | exeerrorcode: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | exeerrordiag: 
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | exitcode: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | exitmsg: OK
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | cpuconsumptiontime: 41863 s
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | nevents: 400
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | neventsw: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | pid: 380830
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | pgrp: 380830
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | corecount: 4
[2025-07-03 18:36:33] 2025-07-03 16:36:00,514 | INFO     | event service: False
[2025-07-03 18:36:33] 2025-07-03 16:36:00,515 | INFO     | sizes: {0: 2366761, 1: 2366761, 4: 2367051, 11: 2367079, 10784: 2396343, 10785: 2405347, 10787: 2405531, 10793: 2405789}
[2025-07-03 18:36:33] 2025-07-03 16:36:00,515 | INFO     | --------------------------------------------------
[2025-07-03 18:36:33] 2025-07-03 16:36:00,515 | INFO     | 
[2025-07-03 18:36:33] 2025-07-03 16:36:00,515 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | job 6716558275 has completed (purged errors)
[2025-07-03 18:36:33] 2025-07-03 16:36:00,534 | INFO     | overall cleanup function is called
[2025-07-03 18:36:33] 2025-07-03 16:36:01,541 | INFO     | --- collectZombieJob: --- 10, [380830]
[2025-07-03 18:36:33] 2025-07-03 16:36:01,541 | INFO     | zombie collector waiting for pid 380830
[2025-07-03 18:36:33] 2025-07-03 16:36:01,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-03 18:36:33] 2025-07-03 16:36:01,541 | INFO     | collected zombie processes
[2025-07-03 18:36:33] 2025-07-03 16:36:01,541 | INFO     | will attempt to kill all subprocesses of pid=380830
[2025-07-03 18:36:33] 2025-07-03 16:36:01,586 | INFO     | process IDs to be killed: [380830] (in reverse order)
[2025-07-03 18:36:33] 2025-07-03 16:36:01,619 | WARNING  | found no corresponding commands to process id(s)
[2025-07-03 18:36:33] 2025-07-03 16:36:01,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-03 18:36:33] 2025-07-03 16:36:01,620 | INFO     | did not find any defunct processes belonging to 380830
[2025-07-03 18:36:33] 2025-07-03 16:36:01,622 | INFO     | did not find any defunct processes belonging to 380830
[2025-07-03 18:36:33] 2025-07-03 16:36:01,622 | INFO     | ready for new job
[2025-07-03 18:36:33] 2025-07-03 16:36:01,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-03 18:36:33] 2025-07-03 16:36:01,623 | INFO     | ***************************************
[2025-07-03 18:36:33] 2025-07-03 16:36:01,623 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-03 18:36:33] 2025-07-03 16:36:01,623 | INFO     | ***************************************
[2025-07-03 18:36:33] 2025-07-03 16:36:01,623 | INFO     | 
[2025-07-03 18:36:33] 2025-07-03 16:36:01,623 | INFO     | architecture information:
[2025-07-03 18:36:33] 2025-07-03 16:36:01,624 | INFO     | executing command: cat /etc/os-release
[2025-07-03 18:36:33] 2025-07-03 16:36:01,638 | INFO     | cat /etc/os-release:
[2025-07-03 18:36:33] NAME="CentOS Linux"
[2025-07-03 18:36:33] VERSION="7 (Core)"
[2025-07-03 18:36:33] ID="centos"
[2025-07-03 18:36:33] ID_LIKE="rhel fedora"
[2025-07-03 18:36:33] VERSION_ID="7"
[2025-07-03 18:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-03 18:36:33] ANSI_COLOR="0;31"
[2025-07-03 18:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-03 18:36:33] HOME_URL="https://www.centos.org/"
[2025-07-03 18:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-03 18:36:33] 
[2025-07-03 18:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-03 18:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-03 18:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-03 18:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-03 18:36:33] 
[2025-07-03 18:36:33] 2025-07-03 16:36:01,638 | INFO     | ***************************************
[2025-07-03 18:36:33] 2025-07-03 16:36:02,141 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | INFO     | sufficient remaining disk space (226971615232 B)
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | INFO     | current server update state: UPDATING_FINAL
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | INFO     | update_server=False
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-03 18:36:33] 2025-07-03 16:36:02,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-03 18:36:33] 2025-07-03 16:36:02,193 | INFO     | all data control threads have been joined
[2025-07-03 18:36:33] 2025-07-03 16:36:03,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-03 18:36:33] 2025-07-03 16:36:03,013 | INFO     | aborting loop
[2025-07-03 18:36:33] 2025-07-03 16:36:03,165 | INFO     | [job] queue monitor thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,165 | INFO     | [job] retrieve thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,199 | INFO     | [data] control thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,291 | INFO     | all job control threads have been joined
[2025-07-03 18:36:33] 2025-07-03 16:36:03,313 | INFO     | [data] copytool_in thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-03 18:36:33] 2025-07-03 16:36:03,522 | INFO     | all payload control threads have been joined
[2025-07-03 18:36:33] 2025-07-03 16:36:03,644 | INFO     | [payload] validate_post thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:03,772 | INFO     | [payload] failed_post thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,019 | INFO     | [job] job monitor thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,135 | INFO     | [job] validate thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,266 | INFO     | [job] create_data_payload thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,297 | INFO     | [job] control thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,330 | INFO     | [payload] validate_pre thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,407 | INFO     | [payload] execute_payloads thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:04,528 | INFO     | [payload] control thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:05,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-03 18:36:33] 2025-07-03 16:36:05,326 | INFO     | [data] copytool_out thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:09,196 | INFO     | [data] queue_monitor thread has finished
[2025-07-03 18:36:33] 2025-07-03 16:36:10,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306393499456)>', '<ExcThread(monitor, started 140305290483456)>']
[2025-07-03 18:36:33] 2025-07-03 16:36:15,884 | INFO     | all workflow threads have been joined
[2025-07-03 18:36:33] 2025-07-03 16:36:15,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-03 18:36:33] 2025-07-03 16:36:15,884 | INFO     | traces error code: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:15,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | INFO     | PID=374198 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | INFO     | found 0 job(s) in 20 queues
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-03 18:36:33] 2025-07-03 16:36:33,240 | INFO     | [monitor] control thread has ended
[2025-07-03 18:36:33] 2025-07-03 16:36:33,317 [wrapper] ==== pilot stdout END ====
[2025-07-03 18:36:33] 2025-07-03 16:36:33,321 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-03 18:36:33] 2025-07-03 16:36:33,325 [wrapper] pilotpid: 374198
[2025-07-03 18:36:33] 2025-07-03 16:36:33,329 [wrapper] Pilot exit status: 0
[2025-07-03 18:36:33] 2025-07-03 16:36:33,341 [wrapper] pandaids: 6716558275
[2025-07-03 18:36:33] 2025-07-03 16:36:33,364 [wrapper] cleanup supervisor_pilot  402154 374199
[2025-07-03 18:36:33] 2025-07-03 16:36:33,368 [wrapper] Test setup, not cleaning
[2025-07-03 18:36:33] 2025-07-03 16:36:33,372 [wrapper] apfmon messages muted
[2025-07-03 18:36:33] 2025-07-03 16:36:33,376 [wrapper] ==== wrapper stdout END ====
[2025-07-03 18:36:33] 2025-07-03 16:36:33,381 [wrapper] ==== wrapper stderr END ====
[2025-07-03 18:36:33]  *** Error codes and diagnostics ***
[2025-07-03 18:36:33]     "exeErrorCode": 0,
[2025-07-03 18:36:33]     "exeErrorDiag": "",
[2025-07-03 18:36:33]     "pilotErrorCode": 0,
[2025-07-03 18:36:33]     "pilotErrorDiag": "",
[2025-07-03 18:36:33]  *** Listing of results directory ***
[2025-07-03 18:36:33] total 476436
[2025-07-03 18:36:33] -rwx------ 1 boinc boinc     36292 Jul  1 19:31 runpilot2-wrapper.sh
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc      5112 Jul  1 19:31 queuedata.json
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc    530466 Jul  1 19:31 pilot3.tar.gz
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc       100 Jul  3 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-03 18:36:33] -rwxr-xr-x 1 boinc boinc      7986 Jul  3 15:35 run_atlas
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc       105 Jul  3 15:35 job.xml
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc 272665916 Jul  3 15:35 EVNT.45435985._000005.pool.root.1
[2025-07-03 18:36:33] drwxrwx--x 2 boinc boinc      4096 Jul  3 15:35 shared
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc    542911 Jul  3 15:35 input.tar.gz
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc     15095 Jul  3 15:35 start_atlas.sh
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc         0 Jul  3 15:35 boinc_setup_complete
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc      6456 Jul  3 15:35 init_data.xml
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc         0 Jul  3 15:35 boinc_lockfile
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc      2702 Jul  3 15:35 pandaJob.out
[2025-07-03 18:36:33] -rw------- 1 boinc boinc    970524 Jul  3 15:35 agis_schedconf.cvmfs.json
[2025-07-03 18:36:33] -rw------- 1 boinc boinc   1574086 Jul  3 15:35 agis_ddmendpoints.agis.ALL.json
[2025-07-03 18:36:33] drwx------ 4 boinc boinc      4096 Jul  3 15:35 pilot3
[2025-07-03 18:36:33] -rw------- 1 boinc boinc 208771028 Jul  3 18:35 HITS.45435989._000115.pool.root.1
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc       530 Jul  3 18:35 boinc_task_state.xml
[2025-07-03 18:36:33] -rw------- 1 boinc boinc      1031 Jul  3 18:35 memory_monitor_summary.json
[2025-07-03 18:36:33] -rw------- 1 boinc boinc        95 Jul  3 18:35 pilot_heartbeat.json
[2025-07-03 18:36:33] -rw------- 1 boinc boinc    301471 Jul  3 18:35 log.45435989._000115.job.log.tgz.1
[2025-07-03 18:36:33] -rw------- 1 boinc boinc      7759 Jul  3 18:36 heartbeat.json
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc      8192 Jul  3 18:36 boinc_mmap_file
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc        28 Jul  3 18:36 wrapper_checkpoint.txt
[2025-07-03 18:36:33] -rw------- 1 boinc boinc       746 Jul  3 18:36 pilotlog.txt
[2025-07-03 18:36:33] -rw------- 1 boinc boinc    994826 Jul  3 18:36 log.45435989._000115.job.log.1
[2025-07-03 18:36:33] -rw------- 1 boinc boinc       357 Jul  3 18:36 output.list
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc       620 Jul  3 18:36 runtime_log
[2025-07-03 18:36:33] -rw------- 1 boinc boinc   1310720 Jul  3 18:36 result.tar.gz
[2025-07-03 18:36:33] -rw------- 1 boinc boinc       663 Jul  3 18:36 wSIMDmp0tq7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiXmKDmZxDZtm.diag
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc      8740 Jul  3 18:36 runtime_log.err
[2025-07-03 18:36:33] -rw-r--r-- 1 boinc boinc     21250 Jul  3 18:36 stderr.txt
[2025-07-03 18:36:33] HITS file was successfully produced:
[2025-07-03 18:36:33] -rw------- 1 boinc boinc 208771028 Jul  3 18:35 shared/HITS.pool.root.1
[2025-07-03 18:36:33]  *** Contents of shared directory: ***
[2025-07-03 18:36:33] total 471992
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc 272665916 Jul  3 15:35 ATLAS.root_0
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc    542911 Jul  3 15:35 input.tar.gz
[2025-07-03 18:36:33] -rw-r--r-- 2 boinc boinc     15095 Jul  3 15:35 start_atlas.sh
[2025-07-03 18:36:33] -rw------- 1 boinc boinc 208771028 Jul  3 18:35 HITS.pool.root.1
[2025-07-03 18:36:33] -rw------- 1 boinc boinc   1310720 Jul  3 18:36 result.tar.gz
18:36:34 (369933): run_atlas exited; CPU time 41910.706506
18:36:34 (369933): called boinc_finish(0)

</stderr_txt>
]]>

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