Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:26 (1890537): wrapper (7.7.26015): starting
19:50:26 (1890537): wrapper: running run_atlas (--nthreads 8)
[2025-07-01 19:50:26] Arguments: --nthreads 8
[2025-07-01 19:50:26] Threads: 8
[2025-07-01 19:50:26] Checking for CVMFS
[2025-07-01 19:50:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 19:50:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 19:50:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 19:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 19:50:27] 2.12.6.0 3829380 7165 318148 147825 2 717 38004064 40960000 20590 16776704 0 202524266 99.870 79179998 34961 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-01 19:50:27] CVMFS is ok
[2025-07-01 19:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-01 19:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-01 19:50:27] Further information can be found at the LHC@home message board.
[2025-07-01 19:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 19:50:27] Checking for apptainer binary...
[2025-07-01 19:50:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-01 19:50:27] Running /usr/bin/apptainer --version
[2025-07-01 19:50:27] apptainer version 1.4.1-1.el9
[2025-07-01 19:50:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 19:50:27] c8-7-6.aglt2.org
[2025-07-01 19:50:27] apptainer works
[2025-07-01 19:50:27] Set ATHENA_PROC_NUMBER=8
[2025-07-01 19:50:27] Set ATHENA_CORE_NUMBER=8
[2025-07-01 19:50:27] Starting ATLAS job with PandaID=6716916296
[2025-07-01 19:50:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 21:02:00]  *** The last 200 lines of the pilot log: ***
[2025-07-01 21:02:00]  is_tar=False
[2025-07-01 21:02:00]  lfn=log.45418282._000396.job.log.tgz.1
[2025-07-01 21:02:00]  mtime=0
[2025-07-01 21:02:00]  protocol_id=None
[2025-07-01 21:02:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-01 21:02:00]  replicas=None
[2025-07-01 21:02:00]  scope=mc23_13p6TeV
[2025-07-01 21:02:00]  status=None
[2025-07-01 21:02:00]  status_code=0
[2025-07-01 21:02:00]  storage_token=
[2025-07-01 21:02:00]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6716916296/log.45418282._000396.job.log.tgz.1
[2025-07-01 21:02:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/00/log.45418282._000396.job.log.tgz.1
[2025-07-01 21:02:00]  workdir=None
[2025-07-01 21:02:00] ]
[2025-07-01 21:02:00] 2025-07-02 01:01:20,737 | INFO     | transferring file log.45418282._000396.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6716916296/log.45418282._000396.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-01 21:02:00] 2025-07-02 01:01:20,737 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6716916296/log.45418282._000396.job.log.tgz.1 /tmp/boinchome/slots/1/log.45418282._000396.job
[2025-07-01 21:02:00] 2025-07-02 01:01:20,756 | INFO     | adding to output.list: log.45418282._000396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/00/log.45418282._000396.job.log.tg
[2025-07-01 21:02:00] 2025-07-02 01:01:20,756 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-01 21:02:00] 2025-07-02 01:01:20,756 | INFO     | summary of transferred files:
[2025-07-01 21:02:00] 2025-07-02 01:01:20,756 | INFO     |  -- lfn=log.45418282._000396.job.log.tgz.1, status_code=0, status=transferred
[2025-07-01 21:02:00] 2025-07-02 01:01:20,756 | INFO     | stage-out finished correctly
[2025-07-01 21:02:00] 2025-07-02 01:01:21,231 | INFO     | monitor loop #308: job 0:6716916296 is in state 'finished'
[2025-07-01 21:02:00] 2025-07-02 01:01:21,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-01 21:02:00] 2025-07-02 01:01:23,075 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-01 21:02:00] 2025-07-02 01:01:23,130 | INFO     | job 6716916296 has state=finished
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | preparing for final server update for job 6716916296 in state='finished'
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | this job has now completed (state=finished)
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | log transfer has been attempted: DONE
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | job 6716916296 has finished - writing final server update
[2025-07-01 21:02:00] 2025-07-02 01:01:23,131 | INFO     | total number of processed events: 400 (read)
[2025-07-01 21:02:00] 2025-07-02 01:01:23,132 | INFO     | executing command: lscpu
[2025-07-01 21:02:00] 2025-07-02 01:01:23,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-01 21:02:00] 2025-07-02 01:01:23,734 | INFO     | monitor loop #309: job 0:6716916296 is in state 'finished'
[2025-07-01 21:02:00] 2025-07-02 01:01:23,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-01 21:02:00] 2025-07-02 01:01:26,237 | INFO     | monitor loop #310: job 0:6716916296 is in state 'finished'
[2025-07-01 21:02:00] 2025-07-02 01:01:26,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,386 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-01 21:02:00] 2025-07-02 01:01:27,391 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3709.875156249998
[2025-07-01 21:02:00] 2025-07-02 01:01:27,405 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6716916296/memory_monitor_summary.json (trf name=prmon)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,405 | INFO     | extracted standard info from prmon json
[2025-07-01 21:02:00] 2025-07-02 01:01:27,405 | INFO     | extracted standard memory fields from prmon json
[2025-07-01 21:02:00] 2025-07-02 01:01:27,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 21:02:00] 2025-07-02 01:01:27,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 21:02:00] 2025-07-02 01:01:27,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | fitting pss+swap vs Time
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | sum of square deviations: 77515872.0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | sum of deviations: -5435511871.999996
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | mean x: 1751416059.0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | mean y: 2603931.126984127
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | -- intersect: 122814133181.6261
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | intersect: 122814133181.6261
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | chi2: 0.02631000853551681
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | -- intersect: 122814133181.6261
[2025-07-01 21:02:00] 2025-07-02 01:01:27,407 | INFO     | current memory leak: -70.12 B/s (using 63 data points, chi2=0.03)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | ..............................
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . Timing measurements:
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . get job = 0 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . initial setup = 2 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . payload setup = 6 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . stage-in = 0 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . payload execution = 4218 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . stage-out = 0 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | . log creation = 0 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,408 | INFO     | ..............................
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | 
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | job summary report
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | --------------------------------------------------
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | PanDA job id: 6716916296
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | task id: 45418282
[2025-07-01 21:02:00] 2025-07-02 01:01:27,459 | INFO     | errors: (none)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | pilot state: finished 
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | transexitcode: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | exeerrorcode: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | exeerrordiag: 
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | exitcode: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | exitmsg: OK
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | cpuconsumptiontime: 31637 s
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | nevents: 400
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | neventsw: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | pid: 1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | pgrp: 1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | corecount: 8
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | event service: False
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | sizes: {0: 2366449, 1: 2366648, 5: 2366910, 11: 2366966, 4228: 2392809, 4229: 2401807, 4231: 2401991, 4236: 2402185}
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | --------------------------------------------------
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | 
[2025-07-01 21:02:00] 2025-07-02 01:01:27,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 21:02:00] 2025-07-02 01:01:27,480 | INFO     | job 6716916296 has completed (purged errors)
[2025-07-01 21:02:00] 2025-07-02 01:01:27,480 | INFO     | overall cleanup function is called
[2025-07-01 21:02:00] 2025-07-02 01:01:28,486 | INFO     | --- collectZombieJob: --- 10, [1926046]
[2025-07-01 21:02:00] 2025-07-02 01:01:28,487 | INFO     | zombie collector waiting for pid 1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:28,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 21:02:00] 2025-07-02 01:01:28,487 | INFO     | collected zombie processes
[2025-07-01 21:02:00] 2025-07-02 01:01:28,487 | INFO     | will attempt to kill all subprocesses of pid=1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:28,978 | INFO     | process IDs to be killed: [1926046] (in reverse order)
[2025-07-01 21:02:00] 2025-07-02 01:01:29,153 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 21:02:00] 2025-07-02 01:01:29,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 21:02:00] 2025-07-02 01:01:29,183 | INFO     | did not find any defunct processes belonging to 1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:29,210 | INFO     | did not find any defunct processes belonging to 1926046
[2025-07-01 21:02:00] 2025-07-02 01:01:29,210 | INFO     | ready for new job
[2025-07-01 21:02:00] 2025-07-02 01:01:29,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 21:02:00] 2025-07-02 01:01:29,211 | INFO     | ***************************************
[2025-07-01 21:02:00] 2025-07-02 01:01:29,211 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 21:02:00] 2025-07-02 01:01:29,212 | INFO     | ***************************************
[2025-07-01 21:02:00] 2025-07-02 01:01:29,212 | INFO     | 
[2025-07-01 21:02:00] 2025-07-02 01:01:29,229 | INFO     | architecture information:
[2025-07-01 21:02:00] 2025-07-02 01:01:29,230 | INFO     | executing command: cat /etc/os-release
[2025-07-01 21:02:00] 2025-07-02 01:01:29,247 | INFO     | cat /etc/os-release:
[2025-07-01 21:02:00] NAME="CentOS Linux"
[2025-07-01 21:02:00] VERSION="7 (Core)"
[2025-07-01 21:02:00] ID="centos"
[2025-07-01 21:02:00] ID_LIKE="rhel fedora"
[2025-07-01 21:02:00] VERSION_ID="7"
[2025-07-01 21:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 21:02:00] ANSI_COLOR="0;31"
[2025-07-01 21:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 21:02:00] HOME_URL="https://www.centos.org/"
[2025-07-01 21:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 21:02:00] 
[2025-07-01 21:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 21:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 21:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 21:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 21:02:00] 
[2025-07-01 21:02:00] 2025-07-02 01:01:29,247 | INFO     | ***************************************
[2025-07-01 21:02:00] 2025-07-02 01:01:29,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-01 21:02:00] 2025-07-02 01:01:29,764 | INFO     | sufficient remaining disk space (172370165760 B)
[2025-07-01 21:02:00] 2025-07-02 01:01:29,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | INFO     | update_server=False
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 21:02:00] 2025-07-02 01:01:29,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 21:02:00] 2025-07-02 01:01:29,766 | INFO     | aborting loop
[2025-07-01 21:02:00] 2025-07-02 01:01:29,835 | INFO     | all job control threads have been joined
[2025-07-01 21:02:00] 2025-07-02 01:01:30,265 | INFO     | all data control threads have been joined
[2025-07-01 21:02:00] 2025-07-02 01:01:30,673 | INFO     | all payload control threads have been joined
[2025-07-01 21:02:00] 2025-07-02 01:01:30,770 | INFO     | [job] retrieve thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,772 | INFO     | [job] job monitor thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,825 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,831 | INFO     | [job] validate thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,841 | INFO     | [job] control thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,958 | INFO     | [data] copytool_in thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:30,966 | INFO     | [payload] validate_post thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,113 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,273 | INFO     | [data] control thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,616 | INFO     | [payload] failed_post thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,679 | INFO     | [payload] control thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,771 | INFO     | [data] copytool_out thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:31,817 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:32,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:32,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 21:02:00] 2025-07-02 01:01:33,474 | INFO     | [job] queue monitor thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:33,773 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 21:02:00] 2025-07-02 01:01:35,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769840785216)>', '<ExcThread(monitor, started 139769325524736)>']
[2025-07-01 21:02:00] 2025-07-02 01:01:40,571 | INFO     | all workflow threads have been joined
[2025-07-01 21:02:00] 2025-07-02 01:01:40,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 21:02:00] 2025-07-02 01:01:40,571 | INFO     | traces error code: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:40,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 21:02:00] 2025-07-02 01:01:59,759 | INFO     | PID=1903105 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-01 21:02:00] 2025-07-02 01:01:59,761 | INFO     | .. there are 50 such processes running
[2025-07-01 21:02:00] 2025-07-02 01:01:59,762 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 21:02:00] 2025-07-02 01:01:59,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 21:02:00] 2025-07-02 01:01:59,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 21:02:00] 2025-07-02 01:01:59,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 21:02:00] 2025-07-02 01:01:59,762 | INFO     | [monitor] control thread has ended
[2025-07-01 21:02:00] 2025-07-02 01:01:59,862 [wrapper] ==== pilot stdout END ====
[2025-07-01 21:02:00] 2025-07-02 01:01:59,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 21:02:00] 2025-07-02 01:01:59,865 [wrapper] pilotpid: 1903105
[2025-07-01 21:02:00] 2025-07-02 01:01:59,867 [wrapper] Pilot exit status: 0
[2025-07-01 21:02:00] 2025-07-02 01:01:59,874 [wrapper] pandaids: 6716916296
[2025-07-01 21:02:00] 2025-07-02 01:01:59,983 [wrapper] cleanup supervisor_pilot 3603706 1903106
[2025-07-01 21:02:00] 2025-07-02 01:01:59,987 [wrapper] Test setup, not cleaning
[2025-07-01 21:02:00] 2025-07-02 01:01:59,989 [wrapper] apfmon messages muted
[2025-07-01 21:02:00] 2025-07-02 01:01:59,991 [wrapper] ==== wrapper stdout END ====
[2025-07-01 21:02:00] 2025-07-02 01:01:59,993 [wrapper] ==== wrapper stderr END ====
[2025-07-01 21:02:00]  *** Error codes and diagnostics ***
[2025-07-01 21:02:00]     "exeErrorCode": 0,
[2025-07-01 21:02:00]     "exeErrorDiag": "",
[2025-07-01 21:02:00]     "pilotErrorCode": 0,
[2025-07-01 21:02:00]     "pilotErrorDiag": "",
[2025-07-01 21:02:00]  *** Listing of results directory ***
[2025-07-01 21:02:00] total 442736
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas    530466 Jul  1 18:33 pilot3.tar.gz
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas      5112 Jul  1 19:15 queuedata.json
[2025-07-01 21:02:00] -rwx------. 1 boincer umatlas     36292 Jul  1 19:15 runpilot2-wrapper.sh
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas       100 Jul  1 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 21:02:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul  1 19:50 run_atlas
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas       105 Jul  1 19:50 job.xml
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas 253222461 Jul  1 19:50 EVNT.45418280._000018.pool.root.1
[2025-07-01 21:02:00] drwxrwx--x. 2 boincer umatlas      4096 Jul  1 19:50 shared
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas    542895 Jul  1 19:50 input.tar.gz
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas     15095 Jul  1 19:50 start_atlas.sh
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas         0 Jul  1 19:50 boinc_lockfile
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas      2577 Jul  1 19:50 pandaJob.out
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas    969903 Jul  1 19:50 agis_schedconf.cvmfs.json
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas   1574086 Jul  1 19:50 agis_ddmendpoints.agis.ALL.json
[2025-07-01 21:02:00] drwx------. 4 boincer umatlas      4096 Jul  1 19:50 pilot3
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas      7159 Jul  1 20:57 init_data.xml
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas 194848144 Jul  1 21:00 HITS.45418282._000396.pool.root.1
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas       529 Jul  1 21:01 boinc_task_state.xml
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas      1032 Jul  1 21:01 memory_monitor_summary.json
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas    299337 Jul  1 21:01 log.45418282._000396.job.log.tgz.1
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas      7764 Jul  1 21:01 heartbeat.json
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas      8192 Jul  1 21:01 boinc_mmap_file
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas        27 Jul  1 21:01 wrapper_checkpoint.txt
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas        95 Jul  1 21:01 pilot_heartbeat.json
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas       823 Jul  1 21:01 pilotlog.txt
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas    423652 Jul  1 21:01 log.45418282._000396.job.log.1
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas       357 Jul  1 21:02 output.list
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas       620 Jul  1 21:02 runtime_log
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas    737280 Jul  1 21:02 result.tar.gz
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas       650 Jul  1 21:02 4pJNDmuNzq7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnn6KDmm6qxtm.diag
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas      8650 Jul  1 21:02 runtime_log.err
[2025-07-01 21:02:00] -rw-r--r--. 1 boincer umatlas     21610 Jul  1 21:02 stderr.txt
[2025-07-01 21:02:00] HITS file was successfully produced:
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas 194848144 Jul  1 21:00 shared/HITS.pool.root.1
[2025-07-01 21:02:00]  *** Contents of shared directory: ***
[2025-07-01 21:02:00] total 438848
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas 253222461 Jul  1 19:50 ATLAS.root_0
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas    542895 Jul  1 19:50 input.tar.gz
[2025-07-01 21:02:00] -rw-r--r--. 2 boincer umatlas     15095 Jul  1 19:50 start_atlas.sh
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas 194848144 Jul  1 21:00 HITS.pool.root.1
[2025-07-01 21:02:00] -rw-------. 1 boincer umatlas    737280 Jul  1 21:02 result.tar.gz
21:02:01 (1890537): run_atlas exited; CPU time 31735.017309
21:02:01 (1890537): called boinc_finish(0)

</stderr_txt>
]]>

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