Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:56 (23647): wrapper (7.7.26015): starting
15:49:56 (23647): wrapper: running run_atlas (--nthreads 8)
[2025-07-01 15:49:56] Arguments: --nthreads 8
[2025-07-01 15:49:56] Threads: 8
[2025-07-01 15:49:56] Checking for CVMFS
[2025-07-01 15:49:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 15:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 15:49:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 15:49:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 15:49:57] 2.11.2.0 5744 72282 137328 147808 3 232 21228519 25165824 2849 130560 0 67636973 99.875 43337800 4230 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-01 15:49:57] CVMFS is ok
[2025-07-01 15:49:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 15:49:57] Checking for apptainer binary...
[2025-07-01 15:49:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-01 15:49:57] Running /usr/bin/apptainer --version
[2025-07-01 15:49:57] apptainer version 1.3.2-1.el7
[2025-07-01 15:49:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 15:49:59] cg-vwn299.simple-grid.lan
[2025-07-01 15:49:59] apptainer works
[2025-07-01 15:49:59] Set ATHENA_PROC_NUMBER=8
[2025-07-01 15:49:59] Set ATHENA_CORE_NUMBER=8
[2025-07-01 15:49:59] Starting ATLAS job with PandaID=6712773555
[2025-07-01 15:49:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 18:47:38]  *** The last 200 lines of the pilot log: ***
[2025-07-01 18:47:38] 2025-07-01 16:47:05,983 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-01 18:47:38] 2025-07-01 16:47:05,984 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-07-01 18:47:38] 2025-07-01 16:47:05,985 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6712773555/memory_monitor_summary.json (trf name=prmon)
[2025-07-01 18:47:38] 2025-07-01 16:47:05,986 | INFO     | extracted standard info from prmon json
[2025-07-01 18:47:38] 2025-07-01 16:47:05,986 | INFO     | extracted standard memory fields from prmon json
[2025-07-01 18:47:38] 2025-07-01 16:47:05,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 18:47:38] 2025-07-01 16:47:05,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 18:47:38] 2025-07-01 16:47:05,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 18:47:38] 2025-07-01 16:47:05,989 | INFO     | fitting pss+swap vs Time
[2025-07-01 18:47:38] 2025-07-01 16:47:05,990 | INFO     | sum of square deviations: 1523386702.5
[2025-07-01 18:47:38] 2025-07-01 16:47:05,991 | INFO     | sum of deviations: 2886414012.4999895
[2025-07-01 18:47:38] 2025-07-01 16:47:05,991 | INFO     | mean x: 1751383203.5
[2025-07-01 18:47:38] 2025-07-01 16:47:05,991 | INFO     | mean y: 2557131.9235294117
[2025-07-01 18:47:38] 2025-07-01 16:47:05,991 | INFO     | -- intersect: -3315849817.2401357
[2025-07-01 18:47:38] 2025-07-01 16:47:05,991 | INFO     | intersect: -3315849817.2401357
[2025-07-01 18:47:38] 2025-07-01 16:47:05,992 | INFO     | chi2: 1.6961634902788405
[2025-07-01 18:47:38] 2025-07-01 16:47:05,992 | INFO     | sum of square deviations: 1392881930.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,993 | INFO     | sum of deviations: 2934908676.999994
[2025-07-01 18:47:38] 2025-07-01 16:47:05,993 | INFO     | mean x: 1751383051.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,993 | INFO     | mean y: 2557188.787878788
[2025-07-01 18:47:38] 2025-07-01 16:47:05,993 | INFO     | -- intersect: -3687740748.4756355
[2025-07-01 18:47:38] 2025-07-01 16:47:05,994 | INFO     | intersect: -3687740748.4756355
[2025-07-01 18:47:38] 2025-07-01 16:47:05,994 | INFO     | chi2: 1.6969454974180662
[2025-07-01 18:47:38] 2025-07-01 16:47:05,994 | INFO     | current chi2=1.6969454974180662 (change=-0.046104467152347305 %)
[2025-07-01 18:47:38] 2025-07-01 16:47:05,994 | INFO     | right removable region: 164
[2025-07-01 18:47:38] 2025-07-01 16:47:05,995 | INFO     | sum of square deviations: 1392881930.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | sum of deviations: -24311601972.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | mean x: 1751383356.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | mean y: 2588490.2848484847
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | -- intersect: 30571536320.24024
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | intersect: 30571536320.24024
[2025-07-01 18:47:38] 2025-07-01 16:47:05,996 | INFO     | chi2: 0.14078790207368846
[2025-07-01 18:47:38] 2025-07-01 16:47:05,997 | INFO     | current chi2=0.14078790207368846 (change=91.69962666449426 %)
[2025-07-01 18:47:38] 2025-07-01 16:47:05,997 | INFO     | sum of square deviations: 1270051720.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,998 | INFO     | sum of deviations: -21725012262.0
[2025-07-01 18:47:38] 2025-07-01 16:47:05,998 | INFO     | mean x: 1751383508.5
[2025-07-01 18:47:38] 2025-07-01 16:47:05,998 | INFO     | mean y: 2585223.425
[2025-07-01 18:47:38] 2025-07-01 16:47:05,998 | INFO     | -- intersect: 29961072423.951824
[2025-07-01 18:47:38] 2025-07-01 16:47:05,998 | INFO     | intersect: 29961072423.951824
[2025-07-01 18:47:38] 2025-07-01 16:47:05,999 | INFO     | chi2: 0.1280769168378854
[2025-07-01 18:47:38] 2025-07-01 16:47:05,999 | INFO     | current chi2=0.1280769168378854 (change=9.028464128366737 %)
[2025-07-01 18:47:38] 2025-07-01 16:47:05,999 | INFO     | left removable region: 20
[2025-07-01 18:47:38] 2025-07-01 16:47:05,999 | INFO     | sum of square deviations: 925859220.0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,000 | INFO     | sum of deviations: -10813800986.0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,000 | INFO     | mean x: 1751383630.5
[2025-07-01 18:47:38] 2025-07-01 16:47:06,000 | INFO     | mean y: 2571536.6944444445
[2025-07-01 18:47:38] 2025-07-01 16:47:06,001 | INFO     | -- intersect: 20458288368.42309
[2025-07-01 18:47:38] 2025-07-01 16:47:06,001 | INFO     | intersect: 20458288368.42309
[2025-07-01 18:47:38] 2025-07-01 16:47:06,001 | INFO     | chi2: 0.09378560379001405
[2025-07-01 18:47:38] 2025-07-01 16:47:06,001 | INFO     | -- intersect: 20458288368.42309
[2025-07-01 18:47:38] 2025-07-01 16:47:06,001 | INFO     | current memory leak: -11.68 B/s (using 144 data points, chi2=0.09)
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | ..............................
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . Timing measurements:
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . get job = 0 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . initial setup = 2 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . payload setup = 43 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . stage-in = 0 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . payload execution = 10417 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,002 | INFO     | . stage-out = 1 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,003 | INFO     | . log creation = 0 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,003 | INFO     | ..............................
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | job summary report
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | --------------------------------------------------
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | PanDA job id: 6712773555
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | task id: 45399143
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | errors: (none)
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | pilot state: finished 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | transexitcode: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | exeerrorcode: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | exeerrordiag: 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | exitcode: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | exitmsg: OK
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | cpuconsumptiontime: 44170 s
[2025-07-01 18:47:38] 2025-07-01 16:47:06,124 | INFO     | nevents: 400
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | neventsw: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | pid: 3005
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | pgrp: 3005
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | corecount: 8
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | event service: False
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | sizes: {0: 2366446, 1: 2366701, 12: 2366701, 23: 2366729, 33: 2366757, 35: 2367075, 44: 2367231, 10465: 2395929, 10466: 2404927, 10468: 2404983, 10485: 2405241}
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | --------------------------------------------------
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-07-01 18:47:38] 2025-07-01 16:47:06,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 18:47:38] 2025-07-01 16:47:06,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 18:47:38] 2025-07-01 16:47:06,155 | INFO     | job 6712773555 has completed (purged errors)
[2025-07-01 18:47:38] 2025-07-01 16:47:06,155 | INFO     | overall cleanup function is called
[2025-07-01 18:47:38] 2025-07-01 16:47:06,286 | INFO     | PID=28081 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-01 18:47:38] 2025-07-01 16:47:06,286 | INFO     | .. there are 9 such processes running
[2025-07-01 18:47:38] 2025-07-01 16:47:07,163 | INFO     | --- collectZombieJob: --- 10, [3005]
[2025-07-01 18:47:38] 2025-07-01 16:47:07,164 | INFO     | zombie collector waiting for pid 3005
[2025-07-01 18:47:38] 2025-07-01 16:47:07,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 18:47:38] 2025-07-01 16:47:07,164 | INFO     | collected zombie processes
[2025-07-01 18:47:38] 2025-07-01 16:47:07,164 | INFO     | will attempt to kill all subprocesses of pid=3005
[2025-07-01 18:47:38] 2025-07-01 16:47:07,265 | INFO     | process IDs to be killed: [3005] (in reverse order)
[2025-07-01 18:47:38] 2025-07-01 16:47:07,322 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 18:47:38] 2025-07-01 16:47:07,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 18:47:38] 2025-07-01 16:47:07,326 | INFO     | did not find any defunct processes belonging to 3005
[2025-07-01 18:47:38] 2025-07-01 16:47:07,328 | INFO     | did not find any defunct processes belonging to 3005
[2025-07-01 18:47:38] 2025-07-01 16:47:07,328 | INFO     | ready for new job
[2025-07-01 18:47:38] 2025-07-01 16:47:07,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 18:47:38] 2025-07-01 16:47:07,330 | INFO     | ***************************************
[2025-07-01 18:47:38] 2025-07-01 16:47:07,330 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 18:47:38] 2025-07-01 16:47:07,330 | INFO     | ***************************************
[2025-07-01 18:47:38] 2025-07-01 16:47:07,330 | INFO     | 
[2025-07-01 18:47:38] 2025-07-01 16:47:07,331 | INFO     | pilot is running in a VM
[2025-07-01 18:47:38] 2025-07-01 16:47:07,331 | INFO     | architecture information:
[2025-07-01 18:47:38] 2025-07-01 16:47:07,332 | INFO     | executing command: cat /etc/os-release
[2025-07-01 18:47:38] 2025-07-01 16:47:07,355 | INFO     | cat /etc/os-release:
[2025-07-01 18:47:38] NAME="CentOS Linux"
[2025-07-01 18:47:38] VERSION="7 (Core)"
[2025-07-01 18:47:38] ID="centos"
[2025-07-01 18:47:38] ID_LIKE="rhel fedora"
[2025-07-01 18:47:38] VERSION_ID="7"
[2025-07-01 18:47:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 18:47:38] ANSI_COLOR="0;31"
[2025-07-01 18:47:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 18:47:38] HOME_URL="https://www.centos.org/"
[2025-07-01 18:47:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 18:47:38] 
[2025-07-01 18:47:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 18:47:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 18:47:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 18:47:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 18:47:38] 
[2025-07-01 18:47:38] 2025-07-01 16:47:07,356 | INFO     | ***************************************
[2025-07-01 18:47:38] 2025-07-01 16:47:07,859 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-07-01 18:47:38] 2025-07-01 16:47:07,965 | INFO     | sufficient remaining disk space (478591057920 B)
[2025-07-01 18:47:38] 2025-07-01 16:47:07,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 18:47:38] 2025-07-01 16:47:07,965 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 18:47:38] 2025-07-01 16:47:07,965 | INFO     | update_server=False
[2025-07-01 18:47:38] 2025-07-01 16:47:07,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 18:47:38] 2025-07-01 16:47:07,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 18:47:38] 2025-07-01 16:47:07,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 18:47:38] 2025-07-01 16:47:07,966 | INFO     | aborting loop
[2025-07-01 18:47:38] 2025-07-01 16:47:08,220 | INFO     | all payload control threads have been joined
[2025-07-01 18:47:38] 2025-07-01 16:47:08,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 18:47:38] 2025-07-01 16:47:08,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 18:47:38] 2025-07-01 16:47:08,971 | INFO     | [job] retrieve thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:08,971 | INFO     | [job] queue monitor thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:08,977 | INFO     | [job] job monitor thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,005 | INFO     | [payload] failed_post thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,058 | INFO     | all data control threads have been joined
[2025-07-01 18:47:38] 2025-07-01 16:47:09,145 | INFO     | all job control threads have been joined
[2025-07-01 18:47:38] 2025-07-01 16:47:09,226 | INFO     | [payload] control thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,473 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,538 | INFO     | [job] validate thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,760 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:09,782 | INFO     | [payload] validate_post thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:10,065 | INFO     | [data] control thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:10,151 | INFO     | [job] control thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:10,295 | INFO     | [data] copytool_in thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:10,371 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:10,497 | INFO     | [data] copytool_out thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:12,963 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:18,836 | INFO     | job.realtimelogging is not enabled
[2025-07-01 18:47:38] 2025-07-01 16:47:19,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 18:47:38] 2025-07-01 16:47:21,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981817595712)>', '<ExcThread(monitor, started 139981230171904)>']
[2025-07-01 18:47:38] 2025-07-01 16:47:26,849 | INFO     | all workflow threads have been joined
[2025-07-01 18:47:38] 2025-07-01 16:47:26,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 18:47:38] 2025-07-01 16:47:26,850 | INFO     | traces error code: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:26,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 18:47:38] 2025-07-01 16:47:38,453 | INFO     | PID=28081 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-01 18:47:38] 2025-07-01 16:47:38,454 | INFO     | .. there are 9 such processes running
[2025-07-01 18:47:38] 2025-07-01 16:47:38,454 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 18:47:38] 2025-07-01 16:47:38,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 18:47:38] 2025-07-01 16:47:38,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 18:47:38] 2025-07-01 16:47:38,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 18:47:38] 2025-07-01 16:47:38,455 | INFO     | [monitor] control thread has ended
[2025-07-01 18:47:38] 2025-07-01 16:47:38,562 [wrapper] ==== pilot stdout END ====
[2025-07-01 18:47:38] 2025-07-01 16:47:38,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 18:47:38] 2025-07-01 16:47:38,595 [wrapper] pilotpid: 28081
[2025-07-01 18:47:38] 2025-07-01 16:47:38,615 [wrapper] Pilot exit status: 0
[2025-07-01 18:47:38] 2025-07-01 16:47:38,660 [wrapper] pandaids: 6712773555
[2025-07-01 18:47:38] 2025-07-01 16:47:38,709 [wrapper] cleanup supervisor_pilot  4636 28082
[2025-07-01 18:47:38] 2025-07-01 16:47:38,728 [wrapper] Test setup, not cleaning
[2025-07-01 18:47:38] 2025-07-01 16:47:38,732 [wrapper] apfmon messages muted
[2025-07-01 18:47:38] 2025-07-01 16:47:38,735 [wrapper] ==== wrapper stdout END ====
[2025-07-01 18:47:38] 2025-07-01 16:47:38,738 [wrapper] ==== wrapper stderr END ====
[2025-07-01 18:47:38]  *** Error codes and diagnostics ***
[2025-07-01 18:47:38]     "exeErrorCode": 0,
[2025-07-01 18:47:38]     "exeErrorDiag": "",
[2025-07-01 18:47:38]     "pilotErrorCode": 0,
[2025-07-01 18:47:38]     "pilotErrorDiag": "",
[2025-07-01 18:47:38]  *** Listing of results directory ***
[2025-07-01 18:47:38] total 543436
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc    530466 Jun 29 08:08 pilot3.tar.gz
[2025-07-01 18:47:38] -rwx------. 1 boinc boinc     36245 Jun 29 08:17 runpilot2-wrapper.sh
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc      5112 Jun 29 08:17 queuedata.json
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc       100 Jul  1 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 18:47:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul  1 15:49 run_atlas
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc       105 Jul  1 15:49 job.xml
[2025-07-01 18:47:38] -rw-r--r--. 2 boinc boinc    542883 Jul  1 15:49 input.tar.gz
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc      6390 Jul  1 15:49 init_data.xml
[2025-07-01 18:47:38] -rw-r--r--. 2 boinc boinc 306898869 Jul  1 15:49 EVNT.45399141._000008.pool.root.1
[2025-07-01 18:47:38] -rw-r--r--. 2 boinc boinc     15095 Jul  1 15:49 start_atlas.sh
[2025-07-01 18:47:38] drwxrwx--x. 2 boinc boinc        68 Jul  1 15:49 shared
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc         0 Jul  1 15:49 boinc_lockfile
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc      2619 Jul  1 15:49 pandaJob.out
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc    969768 Jul  1 15:51 agis_schedconf.cvmfs.json
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc   1574086 Jul  1 15:51 agis_ddmendpoints.agis.ALL.json
[2025-07-01 18:47:38] drwx------. 4 boinc boinc      4096 Jul  1 15:51 pilot3
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc 243104240 Jul  1 18:46 HITS.45399143._000120.pool.root.1
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc       531 Jul  1 18:46 boinc_task_state.xml
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc      1015 Jul  1 18:46 memory_monitor_summary.json
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc    366021 Jul  1 18:46 log.45399143._000120.job.log.tgz.1
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc      7767 Jul  1 18:47 heartbeat.json
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc        28 Jul  1 18:47 wrapper_checkpoint.txt
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc      8192 Jul  1 18:47 boinc_mmap_file
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc       820 Jul  1 18:47 pilotlog.txt
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc        95 Jul  1 18:47 pilot_heartbeat.json
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc    951411 Jul  1 18:47 log.45399143._000120.job.log.1
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc       357 Jul  1 18:47 output.list
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc       620 Jul  1 18:47 runtime_log
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc   1341440 Jul  1 18:47 result.tar.gz
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc      8660 Jul  1 18:47 runtime_log.err
[2025-07-01 18:47:38] -rw-------. 1 boinc boinc       656 Jul  1 18:47 BDjLDmOX0p7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkHlKDm8P5TRo.diag
[2025-07-01 18:47:38] -rw-r--r--. 1 boinc boinc     20868 Jul  1 18:47 stderr.txt
[2025-07-01 18:47:39] HITS file was successfully produced:
[2025-07-01 18:47:39] -rw-------. 1 boinc boinc 243104240 Jul  1 18:46 shared/HITS.pool.root.1
[2025-07-01 18:47:39]  *** Contents of shared directory: ***
[2025-07-01 18:47:39] total 538976
[2025-07-01 18:47:39] -rw-r--r--. 2 boinc boinc    542883 Jul  1 15:49 input.tar.gz
[2025-07-01 18:47:39] -rw-r--r--. 2 boinc boinc 306898869 Jul  1 15:49 ATLAS.root_0
[2025-07-01 18:47:39] -rw-r--r--. 2 boinc boinc     15095 Jul  1 15:49 start_atlas.sh
[2025-07-01 18:47:39] -rw-------. 1 boinc boinc 243104240 Jul  1 18:46 HITS.pool.root.1
[2025-07-01 18:47:39] -rw-------. 1 boinc boinc   1341440 Jul  1 18:47 result.tar.gz
18:47:40 (23647): run_atlas exited; CPU time 44258.929305
18:47:40 (23647): called boinc_finish(0)

</stderr_txt>
]]>

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