Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:10:30 (8635): wrapper (7.7.26015): starting
08:10:30 (8635): wrapper: running run_atlas (--nthreads 8)
[2025-07-01 08:10:30] Arguments: --nthreads 8
[2025-07-01 08:10:30] Threads: 8
[2025-07-01 08:10:30] Checking for CVMFS
[2025-07-01 08:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 08:10:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 08:10:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 08:10:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 08:10:31] 2.11.2.0 5744 71822 138244 147794 2 312 20973947 25165825 2934 130560 0 65728778 99.871 43259825 4227 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-01 08:10:31] CVMFS is ok
[2025-07-01 08:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 08:10:31] Checking for apptainer binary...
[2025-07-01 08:10:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-01 08:10:31] Running /usr/bin/apptainer --version
[2025-07-01 08:10:31] apptainer version 1.3.2-1.el7
[2025-07-01 08:10:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 08:10:33] cg-vwn299.simple-grid.lan
[2025-07-01 08:10:33] apptainer works
[2025-07-01 08:10:33] Set ATHENA_PROC_NUMBER=8
[2025-07-01 08:10:33] Set ATHENA_CORE_NUMBER=8
[2025-07-01 08:10:33] Starting ATLAS job with PandaID=6715257425
[2025-07-01 08:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 11:50:11]  *** The last 200 lines of the pilot log: ***
[2025-07-01 11:50:11] 2025-07-01 09:49:57,727 | INFO     | fitting pss+swap vs Time
[2025-07-01 11:50:11] 2025-07-01 09:49:57,727 | INFO     | sum of square deviations: 3038856977.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,729 | INFO     | sum of deviations: 20111431569.499992
[2025-07-01 11:50:11] 2025-07-01 09:49:57,729 | INFO     | mean x: 1751356848.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,729 | INFO     | mean y: 2485655.4345794395
[2025-07-01 11:50:11] 2025-07-01 09:49:57,729 | INFO     | -- intersect: -11588153085.767223
[2025-07-01 11:50:11] 2025-07-01 09:49:57,729 | INFO     | intersect: -11588153085.767223
[2025-07-01 11:50:11] 2025-07-01 09:49:57,730 | INFO     | chi2: 2.343487440199492
[2025-07-01 11:50:11] 2025-07-01 09:49:57,730 | INFO     | sum of square deviations: 2830787960.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | sum of deviations: 34522828976.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | mean x: 1751356696.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | mean y: 2496008.153110048
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | -- intersect: -21356146372.105007
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | intersect: -21356146372.105007
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | chi2: 1.4734457394446596
[2025-07-01 11:50:11] 2025-07-01 09:49:57,732 | INFO     | current chi2=1.4734457394446596 (change=37.12593828455804 %)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,733 | INFO     | sum of square deviations: 2632440055.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,734 | INFO     | sum of deviations: 33555517297.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,734 | INFO     | mean x: 1751356543.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,734 | INFO     | mean y: 2495264.3088235296
[2025-07-01 11:50:11] 2025-07-01 09:49:57,734 | INFO     | -- intersect: -22321916141.710476
[2025-07-01 11:50:11] 2025-07-01 09:49:57,735 | INFO     | intersect: -22321916141.710476
[2025-07-01 11:50:11] 2025-07-01 09:49:57,735 | INFO     | chi2: 1.4741886690560841
[2025-07-01 11:50:11] 2025-07-01 09:49:57,735 | INFO     | current chi2=1.4741886690560841 (change=-0.050421239923265505 %)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,735 | INFO     | right removable region: 203
[2025-07-01 11:50:11] 2025-07-01 09:49:57,735 | INFO     | sum of square deviations: 2830787960.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,737 | INFO     | sum of deviations: -11761830534.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,737 | INFO     | mean x: 1751357001.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,737 | INFO     | mean y: 2508756.5933014355
[2025-07-01 11:50:11] 2025-07-01 09:49:57,737 | INFO     | -- intersect: 7279339286.244301
[2025-07-01 11:50:11] 2025-07-01 09:49:57,737 | INFO     | intersect: 7279339286.244301
[2025-07-01 11:50:11] 2025-07-01 09:49:57,738 | INFO     | chi2: 0.9341989124878969
[2025-07-01 11:50:11] 2025-07-01 09:49:57,738 | INFO     | current chi2=0.9341989124878969 (change=60.136380658034504 %)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,738 | INFO     | sum of square deviations: 2632440055.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | sum of deviations: -10989924303.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | mean x: 1751357153.5
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | mean y: 2508122.93627451
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | -- intersect: 7314082990.063962
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | intersect: 7314082990.063962
[2025-07-01 11:50:11] 2025-07-01 09:49:57,740 | INFO     | chi2: 0.9193266616822032
[2025-07-01 11:50:11] 2025-07-01 09:49:57,741 | INFO     | current chi2=0.9193266616822032 (change=1.5919790321835054 %)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,741 | INFO     | left removable region: 20
[2025-07-01 11:50:11] 2025-07-01 09:49:57,741 | INFO     | sum of square deviations: 1900284932.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,742 | INFO     | sum of deviations: 5145064275.999999
[2025-07-01 11:50:11] 2025-07-01 09:49:57,742 | INFO     | mean x: 1751357123.0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | mean y: 2517698.9071038254
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | -- intersect: -4739321178.161589
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | intersect: -4739321178.161589
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | chi2: 0.0008194914213807272
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | -- intersect: -4739321178.161589
[2025-07-01 11:50:11] 2025-07-01 09:49:57,743 | INFO     | current memory leak: 2.71 B/s (using 183 data points, chi2=0.00)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | ..............................
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . Timing measurements:
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . get job = 0 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . initial setup = 1 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . payload setup = 21 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . stage-in = 0 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . payload execution = 13048 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . stage-out = 1 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,744 | INFO     | . log creation = 0 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,745 | INFO     | ..............................
[2025-07-01 11:50:11] 2025-07-01 09:49:57,863 | INFO     | 
[2025-07-01 11:50:11] 2025-07-01 09:49:57,864 | INFO     | job summary report
[2025-07-01 11:50:11] 2025-07-01 09:49:57,874 | INFO     | --------------------------------------------------
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | PanDA job id: 6715257425
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | task id: 45418943
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | errors: (none)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | pilot state: finished 
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | transexitcode: 0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | exeerrorcode: 0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | exeerrordiag: 
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | exitcode: 0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | exitmsg: OK
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | cpuconsumptiontime: 63977 s
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | nevents: 400
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | neventsw: 0
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | pid: 20710
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | pgrp: 20710
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | corecount: 8
[2025-07-01 11:50:11] 2025-07-01 09:49:57,875 | INFO     | event service: False
[2025-07-01 11:50:11] 2025-07-01 09:49:57,876 | INFO     | sizes: {0: 2366404, 1: 2366603, 12: 2366603, 15: 2366893, 22: 2366921, 13074: 2396971, 13076: 2406025, 13097: 2406163}
[2025-07-01 11:50:11] 2025-07-01 09:49:57,876 | INFO     | --------------------------------------------------
[2025-07-01 11:50:11] 2025-07-01 09:49:57,876 | INFO     | 
[2025-07-01 11:50:11] 2025-07-01 09:49:57,876 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-07-01 11:50:11] 2025-07-01 09:49:57,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 11:50:11] 2025-07-01 09:49:57,916 | INFO     | job 6715257425 has completed (purged errors)
[2025-07-01 11:50:11] 2025-07-01 09:49:57,916 | INFO     | overall cleanup function is called
[2025-07-01 11:50:11] 2025-07-01 09:49:58,653 | INFO     | PID=12987 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-01 11:50:11] 2025-07-01 09:49:58,653 | INFO     | .. there are 9 such processes running
[2025-07-01 11:50:11] 2025-07-01 09:49:58,924 | INFO     | --- collectZombieJob: --- 10, [20710]
[2025-07-01 11:50:11] 2025-07-01 09:49:58,925 | INFO     | zombie collector waiting for pid 20710
[2025-07-01 11:50:11] 2025-07-01 09:49:58,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 11:50:11] 2025-07-01 09:49:58,925 | INFO     | collected zombie processes
[2025-07-01 11:50:11] 2025-07-01 09:49:58,925 | INFO     | will attempt to kill all subprocesses of pid=20710
[2025-07-01 11:50:11] 2025-07-01 09:49:59,030 | INFO     | process IDs to be killed: [20710] (in reverse order)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,089 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 11:50:11] 2025-07-01 09:49:59,093 | INFO     | did not find any defunct processes belonging to 20710
[2025-07-01 11:50:11] 2025-07-01 09:49:59,095 | INFO     | did not find any defunct processes belonging to 20710
[2025-07-01 11:50:11] 2025-07-01 09:49:59,095 | INFO     | ready for new job
[2025-07-01 11:50:11] 2025-07-01 09:49:59,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 11:50:11] 2025-07-01 09:49:59,097 | INFO     | ***************************************
[2025-07-01 11:50:11] 2025-07-01 09:49:59,097 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 11:50:11] 2025-07-01 09:49:59,097 | INFO     | ***************************************
[2025-07-01 11:50:11] 2025-07-01 09:49:59,097 | INFO     | 
[2025-07-01 11:50:11] 2025-07-01 09:49:59,098 | INFO     | pilot is running in a VM
[2025-07-01 11:50:11] 2025-07-01 09:49:59,098 | INFO     | architecture information:
[2025-07-01 11:50:11] 2025-07-01 09:49:59,098 | INFO     | executing command: cat /etc/os-release
[2025-07-01 11:50:11] 2025-07-01 09:49:59,128 | INFO     | cat /etc/os-release:
[2025-07-01 11:50:11] NAME="CentOS Linux"
[2025-07-01 11:50:11] VERSION="7 (Core)"
[2025-07-01 11:50:11] ID="centos"
[2025-07-01 11:50:11] ID_LIKE="rhel fedora"
[2025-07-01 11:50:11] VERSION_ID="7"
[2025-07-01 11:50:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 11:50:11] ANSI_COLOR="0;31"
[2025-07-01 11:50:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 11:50:11] HOME_URL="https://www.centos.org/"
[2025-07-01 11:50:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 11:50:11] 
[2025-07-01 11:50:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 11:50:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 11:50:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 11:50:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 11:50:11] 
[2025-07-01 11:50:11] 2025-07-01 09:49:59,128 | INFO     | ***************************************
[2025-07-01 11:50:11] 2025-07-01 09:49:59,631 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-07-01 11:50:11] 2025-07-01 09:49:59,649 | INFO     | sufficient remaining disk space (482393194496 B)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 11:50:11] 2025-07-01 09:49:59,649 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 11:50:11] 2025-07-01 09:49:59,649 | INFO     | update_server=False
[2025-07-01 11:50:11] 2025-07-01 09:49:59,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,650 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,650 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 11:50:11] 2025-07-01 09:49:59,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 11:50:11] 2025-07-01 09:49:59,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 11:50:11] 2025-07-01 09:49:59,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 11:50:11] 2025-07-01 09:49:59,728 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-01 11:50:11] 2025-07-01 09:49:59,729 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-01 11:50:11] 2025-07-01 09:49:59,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 11:50:11] 2025-07-01 09:49:59,729 | INFO     | will abort loop
[2025-07-01 11:50:11] 2025-07-01 09:49:59,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 11:50:11] 2025-07-01 09:50:00,111 | INFO     | all data control threads have been joined
[2025-07-01 11:50:11] 2025-07-01 09:50:00,655 | INFO     | [job] retrieve thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:00,659 | INFO     | [job] queue monitor thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:00,732 | INFO     | all payload control threads have been joined
[2025-07-01 11:50:11] 2025-07-01 09:50:00,739 | INFO     | [job] job monitor thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:00,832 | INFO     | [payload] failed_post thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:00,895 | INFO     | all job control threads have been joined
[2025-07-01 11:50:11] 2025-07-01 09:50:01,118 | INFO     | [data] control thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 11:50:11] 2025-07-01 09:50:01,260 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,287 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,358 | INFO     | [data] copytool_in thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,431 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,462 | INFO     | [payload] validate_post thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,737 | INFO     | [payload] control thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,837 | INFO     | [job] validate thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,900 | INFO     | [job] control thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:01,951 | INFO     | [data] copytool_out thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:05,130 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 11:50:11] 2025-07-01 09:50:05,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885075162944)>', '<ExcThread(monitor, started 139884626945792)>']
[2025-07-01 11:50:11] 2025-07-01 09:50:06,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 11:50:11] 2025-07-01 09:50:06,687 | INFO     | [monitor] control thread has ended
[2025-07-01 11:50:11] 2025-07-01 09:50:10,898 | INFO     | all workflow threads have been joined
[2025-07-01 11:50:11] 2025-07-01 09:50:10,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 11:50:11] 2025-07-01 09:50:10,899 | INFO     | traces error code: 0
[2025-07-01 11:50:11] 2025-07-01 09:50:10,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 11:50:11] 2025-07-01 09:50:11,048 [wrapper] ==== pilot stdout END ====
[2025-07-01 11:50:11] 2025-07-01 09:50:11,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 11:50:11] 2025-07-01 09:50:11,077 [wrapper] pilotpid: 12987
[2025-07-01 11:50:11] 2025-07-01 09:50:11,093 [wrapper] Pilot exit status: 0
[2025-07-01 11:50:11] 2025-07-01 09:50:11,230 [wrapper] pandaids: 6715257425
[2025-07-01 11:50:11] 2025-07-01 09:50:11,276 [wrapper] cleanup supervisor_pilot 16796 12988
[2025-07-01 11:50:11] 2025-07-01 09:50:11,289 [wrapper] Test setup, not cleaning
[2025-07-01 11:50:11] 2025-07-01 09:50:11,293 [wrapper] apfmon messages muted
[2025-07-01 11:50:11] 2025-07-01 09:50:11,304 [wrapper] ==== wrapper stdout END ====
[2025-07-01 11:50:11] 2025-07-01 09:50:11,307 [wrapper] ==== wrapper stderr END ====
[2025-07-01 11:50:11]  *** Error codes and diagnostics ***
[2025-07-01 11:50:11]     "exeErrorCode": 0,
[2025-07-01 11:50:11]     "exeErrorDiag": "",
[2025-07-01 11:50:11]     "pilotErrorCode": 0,
[2025-07-01 11:50:11]     "pilotErrorDiag": "",
[2025-07-01 11:50:11]  *** Listing of results directory ***
[2025-07-01 11:50:11] total 437832
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc    530466 Jul  1 02:42 pilot3.tar.gz
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      5112 Jul  1 03:26 queuedata.json
[2025-07-01 11:50:11] -rwx------. 1 boinc boinc     36292 Jul  1 03:26 runpilot2-wrapper.sh
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc       100 Jul  1 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 11:50:11] -rwxr-xr-x. 1 boinc boinc      7986 Jul  1 08:10 run_atlas
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc       105 Jul  1 08:10 job.xml
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      6390 Jul  1 08:10 init_data.xml
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc 249124441 Jul  1 08:10 EVNT.45418941._000011.pool.root.1
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc     15095 Jul  1 08:10 start_atlas.sh
[2025-07-01 11:50:11] drwxrwx--x. 2 boinc boinc        68 Jul  1 08:10 shared
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc    542900 Jul  1 08:10 input.tar.gz
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc         0 Jul  1 08:10 boinc_lockfile
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      2582 Jul  1 08:10 pandaJob.out
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc    970049 Jul  1 08:11 agis_schedconf.cvmfs.json
[2025-07-01 11:50:11] drwx------. 4 boinc boinc      4096 Jul  1 08:11 pilot3
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc 192301513 Jul  1 11:49 HITS.45418943._000254.pool.root.1
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc        95 Jul  1 11:49 pilot_heartbeat.json
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc       531 Jul  1 11:49 boinc_task_state.xml
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc      1014 Jul  1 11:49 memory_monitor_summary.json
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc   1574086 Jul  1 11:49 agis_ddmendpoints.agis.ALL.json
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc    368246 Jul  1 11:49 log.45418943._000254.job.log.tgz.1
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc      7765 Jul  1 11:49 heartbeat.json
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      8192 Jul  1 11:50 boinc_mmap_file
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc        28 Jul  1 11:50 wrapper_checkpoint.txt
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc      4729 Jul  1 11:50 pilotlog.txt
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc   1178353 Jul  1 11:50 log.45418943._000254.job.log.1
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc       357 Jul  1 11:50 output.list
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc       620 Jul  1 11:50 runtime_log
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc   1566720 Jul  1 11:50 result.tar.gz
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc       657 Jul  1 11:50 UPWMDmcweq7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmFmKDmUNtn8n.diag
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      8660 Jul  1 11:50 runtime_log.err
[2025-07-01 11:50:11] -rw-r--r--. 1 boinc boinc      1836 Jul  1 11:50 stderr.txt
[2025-07-01 11:50:11] HITS file was successfully produced:
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc 192301513 Jul  1 11:49 shared/HITS.pool.root.1
[2025-07-01 11:50:11]  *** Contents of shared directory: ***
[2025-07-01 11:50:11] total 433164
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc 249124441 Jul  1 08:10 ATLAS.root_0
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc     15095 Jul  1 08:10 start_atlas.sh
[2025-07-01 11:50:11] -rw-r--r--. 2 boinc boinc    542900 Jul  1 08:10 input.tar.gz
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc 192301513 Jul  1 11:49 HITS.pool.root.1
[2025-07-01 11:50:11] -rw-------. 1 boinc boinc   1566720 Jul  1 11:50 result.tar.gz
11:50:13 (8635): run_atlas exited; CPU time 64122.551870
11:50:13 (8635): called boinc_finish(0)

</stderr_txt>
]]>

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