Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:23 (963855): wrapper (7.7.26015): starting
00:05:23 (963855): wrapper: running run_atlas (--nthreads 4)
[2025-07-01 00:05:23] Arguments: --nthreads 4
[2025-07-01 00:05:23] Threads: 4
[2025-07-01 00:05:23] Checking for CVMFS
[2025-07-01 00:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 00:05:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 00:05:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 00:05:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 00:05:24] 2.9.2.0 964051 0 29576 147780 4 1 32836370 36864000 0 130560 0 0 0.000 1291 21163 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-01 00:05:24] CVMFS is ok
[2025-07-01 00:05:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-01 00:05:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-01 00:05:24] Further information can be found at the LHC@home message board.
[2025-07-01 00:05:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 00:05:24] Checking for apptainer binary...
[2025-07-01 00:05:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-01 00:05:24] Running /usr/bin/apptainer --version
[2025-07-01 00:05:24] apptainer version 1.4.1-1.1
[2025-07-01 00:05:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 00:05:25] thA309
[2025-07-01 00:05:25] apptainer works
[2025-07-01 00:05:26] Set ATHENA_PROC_NUMBER=4
[2025-07-01 00:05:26] Set ATHENA_CORE_NUMBER=4
[2025-07-01 00:05:26] Starting ATLAS job with PandaID=6714904233
[2025-07-01 00:05:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 01:45:51]  *** The last 200 lines of the pilot log: ***
[2025-07-01 01:45:51]  filesize=253064
[2025-07-01 01:45:51]  filetype=log
[2025-07-01 01:45:51]  guid=8cdf4ef1-a74b-4160-aa1b-94d02e27adfe
[2025-07-01 01:45:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-01 01:45:51]  is_altstaged=None
[2025-07-01 01:45:51]  is_tar=False
[2025-07-01 01:45:51]  lfn=log.45418959._000262.job.log.tgz.1
[2025-07-01 01:45:51]  mtime=0
[2025-07-01 01:45:51]  protocol_id=None
[2025-07-01 01:45:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-01 01:45:51]  replicas=None
[2025-07-01 01:45:51]  scope=mc23_13p6TeV
[2025-07-01 01:45:51]  status=None
[2025-07-01 01:45:51]  status_code=0
[2025-07-01 01:45:51]  storage_token=
[2025-07-01 01:45:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6714904233/log.45418959._000262.job.log.tgz.1
[2025-07-01 01:45:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/31/log.45418959._000262.job.log.tgz.1
[2025-07-01 01:45:51]  workdir=None
[2025-07-01 01:45:51] ]
[2025-07-01 01:45:51] 2025-06-30 23:45:15,106 | INFO     | transferring file log.45418959._000262.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6714904233/log.45418959._000262.job.log.tgz.1 to /local/data/boinc/
[2025-07-01 01:45:51] 2025-06-30 23:45:15,106 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6714904233/log.45418959._000262.job.log.tgz.1 /local/data/boinc/slots/0/log.45418959._0002
[2025-07-01 01:45:51] 2025-06-30 23:45:15,125 | INFO     | adding to output.list: log.45418959._000262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/31/log.45418959._000262.job.log.tg
[2025-07-01 01:45:51] 2025-06-30 23:45:15,126 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-01 01:45:51] 2025-06-30 23:45:15,126 | INFO     | summary of transferred files:
[2025-07-01 01:45:51] 2025-06-30 23:45:15,126 | INFO     |  -- lfn=log.45418959._000262.job.log.tgz.1, status_code=0, status=transferred
[2025-07-01 01:45:51] 2025-06-30 23:45:15,126 | INFO     | stage-out finished correctly
[2025-07-01 01:45:51] 2025-06-30 23:45:15,162 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-01 01:45:51] 2025-06-30 23:45:15,418 | INFO     | job 6714904233 has state=finished
[2025-07-01 01:45:51] 2025-06-30 23:45:15,418 | INFO     | preparing for final server update for job 6714904233 in state='finished'
[2025-07-01 01:45:51] 2025-06-30 23:45:15,419 | INFO     | this job has now completed (state=finished)
[2025-07-01 01:45:51] 2025-06-30 23:45:15,419 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-01 01:45:51] 2025-06-30 23:45:15,419 | INFO     | log transfer has been attempted: DONE
[2025-07-01 01:45:51] 2025-06-30 23:45:15,419 | INFO     | job 6714904233 has finished - writing final server update
[2025-07-01 01:45:51] 2025-06-30 23:45:15,419 | INFO     | total number of processed events: 400 (read)
[2025-07-01 01:45:51] 2025-06-30 23:45:15,420 | INFO     | executing command: lscpu
[2025-07-01 01:45:51] 2025-06-30 23:45:15,441 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-01 01:45:51] 2025-06-30 23:45:17,274 | INFO     | monitor loop #458: job 0:6714904233 is in state 'finished'
[2025-07-01 01:45:51] 2025-06-30 23:45:17,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-01 01:45:51] 2025-06-30 23:45:18,919 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-01 01:45:51] 2025-06-30 23:45:18,921 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3127.9124999999995
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6714904233/memory_monitor_summary.json (trf name=prmon)
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | INFO     | extracted standard info from prmon json
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | INFO     | extracted standard memory fields from prmon json
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 01:45:51] 2025-06-30 23:45:18,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 01:45:51] 2025-06-30 23:45:18,923 | INFO     | fitting pss+swap vs Time
[2025-07-01 01:45:51] 2025-06-30 23:45:18,923 | INFO     | sum of square deviations: 233641590.0
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | sum of deviations: -16913953973.999998
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | mean x: 1751324211.0
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | mean y: 2494850.604395604
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | -- intersect: 126785646336.6299
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | intersect: 126785646336.6299
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | chi2: 0.1683851240402412
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | -- intersect: 126785646336.6299
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | current memory leak: -72.39 B/s (using 91 data points, chi2=0.17)
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | could have reported an average CPU frequency of 3726 MHz (7 samples)
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | ..............................
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . Timing measurements:
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . get job = 0 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . initial setup = 1 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . payload setup = 5 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . stage-in = 0 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . payload execution = 5954 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . stage-out = 0 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | . log creation = 0 s
[2025-07-01 01:45:51] 2025-06-30 23:45:18,924 | INFO     | ..............................
[2025-07-01 01:45:51] 2025-06-30 23:45:19,280 | INFO     | 
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | job summary report
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | --------------------------------------------------
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | PanDA job id: 6714904233
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | task id: 45418959
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | errors: (none)
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | pilot state: finished 
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | transexitcode: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | exeerrorcode: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | exeerrordiag: 
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | exitcode: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | exitmsg: OK
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | cpuconsumptiontime: 22886 s
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | nevents: 400
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | neventsw: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | pid: 974725
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | pgrp: 974725
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | corecount: 4
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | event service: False
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | sizes: {0: 2366530, 4: 2366792, 11: 2366820, 5963: 2393709, 5964: 2402768, 5968: 2402906}
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | --------------------------------------------------
[2025-07-01 01:45:51] 2025-06-30 23:45:19,281 | INFO     | 
[2025-07-01 01:45:51] 2025-06-30 23:45:19,282 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | job 6714904233 has completed (purged errors)
[2025-07-01 01:45:51] 2025-06-30 23:45:19,304 | INFO     | overall cleanup function is called
[2025-07-01 01:45:51] 2025-06-30 23:45:20,310 | INFO     | --- collectZombieJob: --- 10, [974725]
[2025-07-01 01:45:51] 2025-06-30 23:45:20,311 | INFO     | zombie collector waiting for pid 974725
[2025-07-01 01:45:51] 2025-06-30 23:45:20,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 01:45:51] 2025-06-30 23:45:20,311 | INFO     | collected zombie processes
[2025-07-01 01:45:51] 2025-06-30 23:45:20,311 | INFO     | will attempt to kill all subprocesses of pid=974725
[2025-07-01 01:45:51] 2025-06-30 23:45:20,360 | INFO     | process IDs to be killed: [974725] (in reverse order)
[2025-07-01 01:45:51] 2025-06-30 23:45:20,395 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 01:45:51] 2025-06-30 23:45:20,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 01:45:51] 2025-06-30 23:45:20,397 | INFO     | did not find any defunct processes belonging to 974725
[2025-07-01 01:45:51] 2025-06-30 23:45:20,399 | INFO     | did not find any defunct processes belonging to 974725
[2025-07-01 01:45:51] 2025-06-30 23:45:20,399 | INFO     | ready for new job
[2025-07-01 01:45:51] 2025-06-30 23:45:20,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 01:45:51] 2025-06-30 23:45:20,399 | INFO     | ***************************************
[2025-07-01 01:45:51] 2025-06-30 23:45:20,399 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 01:45:51] 2025-06-30 23:45:20,400 | INFO     | ***************************************
[2025-07-01 01:45:51] 2025-06-30 23:45:20,400 | INFO     | 
[2025-07-01 01:45:51] 2025-06-30 23:45:20,400 | INFO     | architecture information:
[2025-07-01 01:45:51] 2025-06-30 23:45:20,400 | INFO     | executing command: cat /etc/os-release
[2025-07-01 01:45:51] 2025-06-30 23:45:20,414 | INFO     | cat /etc/os-release:
[2025-07-01 01:45:51] NAME="CentOS Linux"
[2025-07-01 01:45:51] VERSION="7 (Core)"
[2025-07-01 01:45:51] ID="centos"
[2025-07-01 01:45:51] ID_LIKE="rhel fedora"
[2025-07-01 01:45:51] VERSION_ID="7"
[2025-07-01 01:45:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 01:45:51] ANSI_COLOR="0;31"
[2025-07-01 01:45:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 01:45:51] HOME_URL="https://www.centos.org/"
[2025-07-01 01:45:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 01:45:51] 
[2025-07-01 01:45:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 01:45:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 01:45:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 01:45:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 01:45:51] 
[2025-07-01 01:45:51] 2025-06-30 23:45:20,414 | INFO     | ***************************************
[2025-07-01 01:45:51] 2025-06-30 23:45:20,917 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | INFO     | sufficient remaining disk space (223044698112 B)
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | INFO     | update_server=False
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 01:45:51] 2025-06-30 23:45:20,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 01:45:51] 2025-06-30 23:45:20,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 01:45:51] 2025-06-30 23:45:20,936 | INFO     | aborting loop
[2025-07-01 01:45:51] 2025-06-30 23:45:20,969 | INFO     | all job control threads have been joined
[2025-07-01 01:45:51] 2025-06-30 23:45:21,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 01:45:51] 2025-06-30 23:45:21,941 | INFO     | [job] queue monitor thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:21,941 | INFO     | [job] retrieve thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:21,941 | INFO     | [job] job monitor thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:21,967 | INFO     | all data control threads have been joined
[2025-07-01 01:45:51] 2025-06-30 23:45:21,975 | INFO     | [job] control thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,005 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,024 | INFO     | [payload] validate_post thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,047 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,122 | INFO     | all payload control threads have been joined
[2025-07-01 01:45:51] 2025-06-30 23:45:22,387 | INFO     | [payload] failed_post thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,640 | INFO     | [data] copytool_in thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,941 | INFO     | [data] copytool_out thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:22,972 | INFO     | [data] control thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:23,092 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:23,128 | INFO     | [payload] control thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:23,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:23,348 | INFO     | [job] validate thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:25,206 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 01:45:51] 2025-06-30 23:45:25,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285082433344)>', '<ExcThread(monitor, started 140284126013184)>']
[2025-07-01 01:45:51] 2025-06-30 23:45:30,826 | INFO     | all workflow threads have been joined
[2025-07-01 01:45:51] 2025-06-30 23:45:30,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 01:45:51] 2025-06-30 23:45:30,827 | INFO     | traces error code: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:30,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 01:45:51] 2025-06-30 23:45:51,172 | INFO     | PID=968100 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-01 01:45:51] 2025-06-30 23:45:51,172 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 01:45:51] 2025-06-30 23:45:51,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 01:45:51] 2025-06-30 23:45:51,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 01:45:51] 2025-06-30 23:45:51,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 01:45:51] 2025-06-30 23:45:51,173 | INFO     | [monitor] control thread has ended
[2025-07-01 01:45:51] 2025-06-30 23:45:51,249 [wrapper] ==== pilot stdout END ====
[2025-07-01 01:45:51] 2025-06-30 23:45:51,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 01:45:51] 2025-06-30 23:45:51,258 [wrapper] pilotpid: 968100
[2025-07-01 01:45:51] 2025-06-30 23:45:51,262 [wrapper] Pilot exit status: 0
[2025-07-01 01:45:51] 2025-06-30 23:45:51,274 [wrapper] pandaids: 6714904233
[2025-07-01 01:45:51] 2025-06-30 23:45:51,297 [wrapper] cleanup supervisor_pilot  987175 968101
[2025-07-01 01:45:51] 2025-06-30 23:45:51,301 [wrapper] Test setup, not cleaning
[2025-07-01 01:45:51] 2025-06-30 23:45:51,305 [wrapper] apfmon messages muted
[2025-07-01 01:45:51] 2025-06-30 23:45:51,309 [wrapper] ==== wrapper stdout END ====
[2025-07-01 01:45:51] 2025-06-30 23:45:51,314 [wrapper] ==== wrapper stderr END ====
[2025-07-01 01:45:51]  *** Error codes and diagnostics ***
[2025-07-01 01:45:51]     "exeErrorCode": 0,
[2025-07-01 01:45:51]     "exeErrorDiag": "",
[2025-07-01 01:45:51]     "pilotErrorCode": 0,
[2025-07-01 01:45:51]     "pilotErrorDiag": "",
[2025-07-01 01:45:51]  *** Listing of results directory ***
[2025-07-01 01:45:51] total 438716
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc    530466 Jun 30 23:59 pilot3.tar.gz
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc      5112 Jul  1 00:03 queuedata.json
[2025-07-01 01:45:51] -rwx------ 1 boinc boinc     36292 Jul  1 00:04 runpilot2-wrapper.sh
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc       100 Jul  1 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 01:45:51] -rwxr-xr-x 1 boinc boinc      7986 Jul  1 00:05 run_atlas
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc       105 Jul  1 00:05 job.xml
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc 255303889 Jul  1 00:05 EVNT.45418957._000011.pool.root.1
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc    542880 Jul  1 00:05 input.tar.gz
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc     15095 Jul  1 00:05 start_atlas.sh
[2025-07-01 01:45:51] drwxrwx--x 2 boinc boinc      4096 Jul  1 00:05 shared
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc         0 Jul  1 00:05 boinc_setup_complete
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc      6455 Jul  1 00:05 init_data.xml
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc         0 Jul  1 00:05 boinc_lockfile
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc      2552 Jul  1 00:05 pandaJob.out
[2025-07-01 01:45:51] -rw------- 1 boinc boinc    970049 Jul  1 00:05 agis_schedconf.cvmfs.json
[2025-07-01 01:45:51] -rw------- 1 boinc boinc   1574086 Jul  1 00:05 agis_ddmendpoints.agis.ALL.json
[2025-07-01 01:45:51] drwx------ 4 boinc boinc      4096 Jul  1 00:05 pilot3
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc       530 Jul  1 01:44 boinc_task_state.xml
[2025-07-01 01:45:51] -rw------- 1 boinc boinc 188446108 Jul  1 01:44 HITS.45418959._000262.pool.root.1
[2025-07-01 01:45:51] -rw------- 1 boinc boinc        95 Jul  1 01:45 pilot_heartbeat.json
[2025-07-01 01:45:51] -rw------- 1 boinc boinc      1021 Jul  1 01:45 memory_monitor_summary.json
[2025-07-01 01:45:51] -rw------- 1 boinc boinc    253064 Jul  1 01:45 log.45418959._000262.job.log.tgz.1
[2025-07-01 01:45:51] -rw------- 1 boinc boinc      7755 Jul  1 01:45 heartbeat.json
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc        27 Jul  1 01:45 wrapper_checkpoint.txt
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc      8192 Jul  1 01:45 boinc_mmap_file
[2025-07-01 01:45:51] -rw------- 1 boinc boinc       746 Jul  1 01:45 pilotlog.txt
[2025-07-01 01:45:51] -rw------- 1 boinc boinc    570161 Jul  1 01:45 log.45418959._000262.job.log.1
[2025-07-01 01:45:51] -rw------- 1 boinc boinc       357 Jul  1 01:45 output.list
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc       620 Jul  1 01:45 runtime_log
[2025-07-01 01:45:51] -rw------- 1 boinc boinc    839680 Jul  1 01:45 result.tar.gz
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc      8734 Jul  1 01:45 runtime_log.err
[2025-07-01 01:45:51] -rw------- 1 boinc boinc       659 Jul  1 01:45 bTVLDmkmbq7n9Rq4apOajLDm4fhM0noT9bVof3QYDmh6lKDmp3Qxkm.diag
[2025-07-01 01:45:51] -rw-r--r-- 1 boinc boinc     21183 Jul  1 01:45 stderr.txt
[2025-07-01 01:45:51] HITS file was successfully produced:
[2025-07-01 01:45:51] -rw------- 1 boinc boinc 188446108 Jul  1 01:44 shared/HITS.pool.root.1
[2025-07-01 01:45:51]  *** Contents of shared directory: ***
[2025-07-01 01:45:51] total 434732
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc 255303889 Jul  1 00:05 ATLAS.root_0
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc    542880 Jul  1 00:05 input.tar.gz
[2025-07-01 01:45:51] -rw-r--r-- 2 boinc boinc     15095 Jul  1 00:05 start_atlas.sh
[2025-07-01 01:45:51] -rw------- 1 boinc boinc 188446108 Jul  1 01:44 HITS.pool.root.1
[2025-07-01 01:45:51] -rw------- 1 boinc boinc    839680 Jul  1 01:45 result.tar.gz
01:45:52 (963855): run_atlas exited; CPU time 22909.751337
01:45:52 (963855): called boinc_finish(0)

</stderr_txt>
]]>

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