Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
02:44:14 (3573443): wrapper (7.7.26015): starting
02:44:14 (3573443): wrapper: running run_atlas (--nthreads 12)
[2025-07-01 02:44:14] Arguments: --nthreads 12
[2025-07-01 02:44:14] Threads: 12
[2025-07-01 02:44:14] Checking for CVMFS
[2025-07-01 02:44:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 02:44:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 02:44:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 02:44:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 02:44:15] 2.12.7.0 2995445 547 69756 147796 1 186 2784972 4194305 0 130560 0 1257105 99.995 25353 809 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2025-07-01 02:44:15] CVMFS is ok
[2025-07-01 02:44:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 02:44:15] Checking for apptainer binary...
[2025-07-01 02:44:15] apptainer is not installed, using version from CVMFS
[2025-07-01 02:44:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 02:44:15] Trebeth
[2025-07-01 02:44:15] apptainer works
[2025-07-01 02:44:15] Set ATHENA_PROC_NUMBER=12
[2025-07-01 02:44:15] Set ATHENA_CORE_NUMBER=12
[2025-07-01 02:44:15] Starting ATLAS job with PandaID=6714824117
[2025-07-01 02:44:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 02:57:39]  *** The last 200 lines of the pilot log: ***
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | WARNING  | wrong length of table data, x=[1751352654.0, 1751352715.0], y=[459019.0, 459019.0] (must be same and length>=4)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | could have reported an average CPU frequency of 1300 MHz (4 samples)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . Timing measurements:
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . get job = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . initial setup = 61 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload setup = 6 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-in = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload execution = 498 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-out = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . log creation = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6714824117/pilotlog.txt
[2025-07-01 02:57:39] 2025-07-01 06:57:07,559 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-01 02:57:39] - Log from pilotlog.txt -
[2025-07-01 02:57:39] 2025-07-01 06:57:07,546 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6714824117/memory_monitor_summary.json (trf name=prmon)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | INFO     | extracted standard info from prmon json
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | INFO     | extracted standard memory fields from prmon json
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | WARNING  | wrong length of table data, x=[1751352654.0, 1751352715.0], y=[459019.0, 459019.0] (must be same and length>=4)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | could have reported an average CPU frequency of 1300 MHz (4 samples)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . Timing measurements:
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . get job = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . initial setup = 61 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload setup = 6 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-in = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload execution = 498 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-out = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . log creation = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6714824117/pilotlog.txt
[2025-07-01 02:57:39] 2025-07-01 06:57:07,559 | WARNING  | 
[2025-07-01 02:57:39] [begin log extracts]
[2025-07-01 02:57:39] - Log from pilotlog.txt -
[2025-07-01 02:57:39] 2025-07-01 06:57:07,546 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6714824117/memory_monitor_summary.json (trf name=prmon)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | INFO     | extracted standard info from prmon json
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | INFO     | extracted standard memory fields from prmon json
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 02:57:39] 2025-07-01 06:57:07,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | WARNING  | wrong length of table data, x=[1751352654.0, 1751352715.0], y=[459019.0, 459019.0] (must be same and length>=4)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | could have reported an average CPU frequency of 1300 MHz (4 samples)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . Timing measurements:
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . get job = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . initial setup = 61 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload setup = 6 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-in = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . payload execution = 498 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . stage-out = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | . log creation = 0 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | ..............................
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-01 02:57:39] 2025-07-01 06:57:07,548 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6714824117/pilotlog.txt
[2025-07-01 02:57:39] [end log extracts]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,559 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,559 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | 
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | job summary report
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | --------------------------------------------------
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | PanDA job id: 6714824117
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | task id: 45418292
[2025-07-01 02:57:39] 2025-07-01 06:57:07,609 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-01 02:53:59,932 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | pilot state: failed 
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | transexitcode: 65
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | exeerrorcode: 65
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | exitcode: 65
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | cpuconsumptiontime: 19 s
[2025-07-01 02:57:39] 2025-07-01 06:57:07,610 | INFO     | nevents: 0
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | neventsw: 0
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | pid: 3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | pgrp: 3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | corecount: 12
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | event service: False
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | sizes: {0: 2366414, 1: 2366613, 4: 2366875, 11: 2366903, 508: 2390565, 509: 2395055, 689: 2395193}
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | --------------------------------------------------
[2025-07-01 02:57:39] 2025-07-01 06:57:07,611 | INFO     | 
[2025-07-01 02:57:39] 2025-07-01 06:57:07,612 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-07-01 02:57:39] 2025-07-01 06:57:07,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | job 6714824117 has completed (purged errors)
[2025-07-01 02:57:39] 2025-07-01 06:57:07,630 | INFO     | overall cleanup function is called
[2025-07-01 02:57:39] 2025-07-01 06:57:08,637 | INFO     | --- collectZombieJob: --- 10, [3594121]
[2025-07-01 02:57:39] 2025-07-01 06:57:08,637 | INFO     | zombie collector waiting for pid 3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:08,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 02:57:39] 2025-07-01 06:57:08,637 | INFO     | collected zombie processes
[2025-07-01 02:57:39] 2025-07-01 06:57:08,637 | INFO     | will attempt to kill all subprocesses of pid=3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:08,757 | INFO     | process IDs to be killed: [3594121] (in reverse order)
[2025-07-01 02:57:39] 2025-07-01 06:57:08,797 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 02:57:39] 2025-07-01 06:57:08,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 02:57:39] 2025-07-01 06:57:08,804 | INFO     | did not find any defunct processes belonging to 3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:08,808 | INFO     | did not find any defunct processes belonging to 3594121
[2025-07-01 02:57:39] 2025-07-01 06:57:08,808 | INFO     | ready for new job
[2025-07-01 02:57:39] 2025-07-01 06:57:08,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 02:57:39] 2025-07-01 06:57:08,809 | INFO     | ***************************************
[2025-07-01 02:57:39] 2025-07-01 06:57:08,809 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 02:57:39] 2025-07-01 06:57:08,809 | INFO     | ***************************************
[2025-07-01 02:57:39] 2025-07-01 06:57:08,809 | INFO     | 
[2025-07-01 02:57:39] 2025-07-01 06:57:08,811 | INFO     | architecture information:
[2025-07-01 02:57:39] 2025-07-01 06:57:08,812 | INFO     | executing command: cat /etc/os-release
[2025-07-01 02:57:39] 2025-07-01 06:57:08,821 | INFO     | cat /etc/os-release:
[2025-07-01 02:57:39] NAME="CentOS Linux"
[2025-07-01 02:57:39] VERSION="7 (Core)"
[2025-07-01 02:57:39] ID="centos"
[2025-07-01 02:57:39] ID_LIKE="rhel fedora"
[2025-07-01 02:57:39] VERSION_ID="7"
[2025-07-01 02:57:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 02:57:39] ANSI_COLOR="0;31"
[2025-07-01 02:57:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 02:57:39] HOME_URL="https://www.centos.org/"
[2025-07-01 02:57:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 02:57:39] 
[2025-07-01 02:57:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 02:57:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 02:57:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 02:57:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 02:57:39] 
[2025-07-01 02:57:39] 2025-07-01 06:57:08,821 | INFO     | ***************************************
[2025-07-01 02:57:39] 2025-07-01 06:57:09,324 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-07-01 02:57:39] 2025-07-01 06:57:09,338 | INFO     | sufficient remaining disk space (404913913856 B)
[2025-07-01 02:57:39] 2025-07-01 06:57:09,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 02:57:39] 2025-07-01 06:57:09,339 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 02:57:39] 2025-07-01 06:57:09,339 | INFO     | update_server=False
[2025-07-01 02:57:39] 2025-07-01 06:57:09,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 02:57:39] 2025-07-01 06:57:09,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 02:57:39] 2025-07-01 06:57:09,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 02:57:39] 2025-07-01 06:57:09,726 | INFO     | all payload control threads have been joined
[2025-07-01 02:57:39] 2025-07-01 06:57:09,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 02:57:39] 2025-07-01 06:57:09,842 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-01 02:57:39] 2025-07-01 06:57:09,842 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-01 02:57:39] 2025-07-01 06:57:09,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 02:57:39] 2025-07-01 06:57:09,842 | INFO     | will abort loop
[2025-07-01 02:57:39] 2025-07-01 06:57:10,195 | INFO     | all job control threads have been joined
[2025-07-01 02:57:39] 2025-07-01 06:57:10,320 | INFO     | all data control threads have been joined
[2025-07-01 02:57:39] 2025-07-01 06:57:10,345 | INFO     | [job] retrieve thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,345 | INFO     | [job] queue monitor thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,731 | INFO     | [payload] control thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,848 | INFO     | [job] job monitor thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,945 | INFO     | [data] copytool_in thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:10,980 | INFO     | [payload] failed_post thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,200 | INFO     | [job] control thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,215 | INFO     | [job] validate thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,284 | INFO     | [payload] validate_post thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,326 | INFO     | [data] control thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,344 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,345 | INFO     | [data] copytool_out thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,467 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:11,479 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:13,786 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 02:57:39] 2025-07-01 06:57:15,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345943586624)>', '<ExcThread(monitor, started 140345488692992)>']
[2025-07-01 02:57:39] 2025-07-01 06:57:20,258 | INFO     | all workflow threads have been joined
[2025-07-01 02:57:39] 2025-07-01 06:57:20,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 02:57:39] 2025-07-01 06:57:20,259 | INFO     | traces error code: 0
[2025-07-01 02:57:39] 2025-07-01 06:57:20,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 02:57:39] 2025-07-01 06:57:39,276 | INFO     | PID=3579087 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-01 02:57:39] 2025-07-01 06:57:39,276 | INFO     | .. there are 2 such processes running
[2025-07-01 02:57:39] 2025-07-01 06:57:39,277 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 02:57:39] 2025-07-01 06:57:39,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 02:57:39] 2025-07-01 06:57:39,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 02:57:39] 2025-07-01 06:57:39,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 02:57:39] 2025-07-01 06:57:39,277 | INFO     | [monitor] control thread has ended
[2025-07-01 02:57:39] 2025-07-01 06:57:39,334 [wrapper] ==== pilot stdout END ====
[2025-07-01 02:57:39] 2025-07-01 06:57:39,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 02:57:39] 2025-07-01 06:57:39,340 [wrapper] pilotpid: 3579087
[2025-07-01 02:57:39] 2025-07-01 06:57:39,342 [wrapper] Pilot exit status: 0
[2025-07-01 02:57:39] 2025-07-01 06:57:39,351 [wrapper] pandaids: 6714824117
[2025-07-01 02:57:39] 2025-07-01 06:57:39,384 [wrapper] cleanup supervisor_pilot 3579106 3579089
[2025-07-01 02:57:39] 2025-07-01 06:57:39,388 [wrapper] Test setup, not cleaning
[2025-07-01 02:57:39] 2025-07-01 06:57:39,390 [wrapper] apfmon messages muted
[2025-07-01 02:57:39] 2025-07-01 06:57:39,393 [wrapper] ==== wrapper stdout END ====
[2025-07-01 02:57:39] 2025-07-01 06:57:39,396 [wrapper] ==== wrapper stderr END ====
[2025-07-01 02:57:39]  *** Error codes and diagnostics ***
[2025-07-01 02:57:39]     "exeErrorCode": 65,
[2025-07-01 02:57:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-01 02:57:39]     "pilotErrorCode": 1305,
[2025-07-01 02:57:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-01 02:57:39]  *** Listing of results directory ***
[2025-07-01 02:57:39] total 247944
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc    530466 Jun 30 17:13 pilot3.tar.gz
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc      5112 Jun 30 17:32 queuedata.json
[2025-07-01 02:57:39] -rwx------ 1 boinc boinc     36292 Jun 30 17:32 runpilot2-wrapper.sh
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc       100 Jul  1 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 02:57:39] -rwxr-xr-x 1 boinc boinc      7986 Jul  1 02:44 run_atlas
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc       105 Jul  1 02:44 job.xml
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc     15095 Jul  1 02:44 start_atlas.sh
[2025-07-01 02:57:39] drwxrwx--x 2 boinc boinc      4096 Jul  1 02:44 shared
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc    542897 Jul  1 02:44 input.tar.gz
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc      7599 Jul  1 02:44 init_data.xml
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc 250016727 Jul  1 02:44 EVNT.45418289._000018.pool.root.1
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc         0 Jul  1 02:44 boinc_lockfile
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc      2553 Jul  1 02:44 pandaJob.out
[2025-07-01 02:57:39] -rw------- 1 boinc boinc         0 Jul  1 02:45 agis_ddmendpoints.agis.ALL.json
[2025-07-01 02:57:39] -rw------- 1 boinc boinc   1310933 Jul  1 02:45 cric_ddmendpoints.json
[2025-07-01 02:57:39] -rw------- 1 boinc boinc    970062 Jul  1 02:45 agis_schedconf.cvmfs.json
[2025-07-01 02:57:39] drwx------ 4 boinc boinc      4096 Jul  1 02:45 pilot3
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc       524 Jul  1 02:54 boinc_task_state.xml
[2025-07-01 02:57:39] -rw------- 1 boinc boinc       990 Jul  1 02:54 memory_monitor_summary.json
[2025-07-01 02:57:39] -rw------- 1 boinc boinc     24679 Jul  1 02:54 log.45418292._000434.job.log.tgz.1
[2025-07-01 02:57:39] -rw------- 1 boinc boinc      8400 Jul  1 02:57 heartbeat.json
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc      8192 Jul  1 02:57 boinc_mmap_file
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc        23 Jul  1 02:57 wrapper_checkpoint.txt
[2025-07-01 02:57:39] -rw------- 1 boinc boinc       822 Jul  1 02:57 pilotlog.txt
[2025-07-01 02:57:39] -rw------- 1 boinc boinc        95 Jul  1 02:57 pilot_heartbeat.json
[2025-07-01 02:57:39] -rw------- 1 boinc boinc    122033 Jul  1 02:57 log.45418292._000434.job.log.1
[2025-07-01 02:57:39] -rw------- 1 boinc boinc       188 Jul  1 02:57 output.list
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc       620 Jul  1 02:57 runtime_log
[2025-07-01 02:57:39] -rw------- 1 boinc boinc    163840 Jul  1 02:57 result.tar.gz
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc      8576 Jul  1 02:57 runtime_log.err
[2025-07-01 02:57:39] -rw------- 1 boinc boinc       634 Jul  1 02:57 568MDmKIbq7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLi5KDmyhN1vm.diag
[2025-07-01 02:57:39] -rw-r--r-- 1 boinc boinc     21666 Jul  1 02:57 stderr.txt
[2025-07-01 02:57:39] No HITS result produced
[2025-07-01 02:57:39]  *** Contents of shared directory: ***
[2025-07-01 02:57:39] total 244872
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc     15095 Jul  1 02:44 start_atlas.sh
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc    542897 Jul  1 02:44 input.tar.gz
[2025-07-01 02:57:39] -rw-r--r-- 2 boinc boinc 250016727 Jul  1 02:44 ATLAS.root_0
[2025-07-01 02:57:39] -rw------- 1 boinc boinc    163840 Jul  1 02:57 result.tar.gz
02:57:41 (3573443): run_atlas exited; CPU time 37.632606
02:57:41 (3573443): called boinc_finish(0)

</stderr_txt>
]]>

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