Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:25:36 (3218374): wrapper (7.7.26015): starting
21:25:36 (3218374): wrapper: running run_atlas (--nthreads 12)
[2025-06-30 21:25:36] Arguments: --nthreads 12
[2025-06-30 21:25:36] Threads: 12
[2025-06-30 21:25:36] Checking for CVMFS
[2025-06-30 21:25:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-30 21:25:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-30 21:25:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-30 21:25:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-30 21:25:36] 2.12.7.0 2995445 229 55340 147787 3 56 2650674 4194304 917 130560 0 482060 99.993 11966 2775 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2025-06-30 21:25:36] CVMFS is ok
[2025-06-30 21:25:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-30 21:25:36] Checking for apptainer binary...
[2025-06-30 21:25:36] apptainer is not installed, using version from CVMFS
[2025-06-30 21:25:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-30 21:25:36] Trebeth
[2025-06-30 21:25:36] apptainer works
[2025-06-30 21:25:36] Set ATHENA_PROC_NUMBER=12
[2025-06-30 21:25:36] Set ATHENA_CORE_NUMBER=12
[2025-06-30 21:25:36] Starting ATLAS job with PandaID=6714825014
[2025-06-30 21:25:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-30 22:20:07]  *** The last 200 lines of the pilot log: ***
[2025-06-30 22:20:07]  lfn=log.45418292._000505.job.log.tgz.1
[2025-06-30 22:20:07]  mtime=0
[2025-06-30 22:20:07]  protocol_id=None
[2025-06-30 22:20:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-30 22:20:07]  replicas=None
[2025-06-30 22:20:07]  scope=mc23_13p6TeV
[2025-06-30 22:20:07]  status=None
[2025-06-30 22:20:07]  status_code=0
[2025-06-30 22:20:07]  storage_token=
[2025-06-30 22:20:07]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6714825014/log.45418292._000505.job.log.tgz.1
[2025-06-30 22:20:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/ce/log.45418292._000505.job.log.tgz.1
[2025-06-30 22:20:07]  workdir=None
[2025-06-30 22:20:07] ]
[2025-06-30 22:20:07] 2025-07-01 02:19:43,476 | INFO     | transferring file log.45418292._000505.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6714825014/log.45418292._000505.job.log.tgz.1 to /var/lib/boinc
[2025-06-30 22:20:07] 2025-07-01 02:19:43,476 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6714825014/log.45418292._000505.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.454182
[2025-06-30 22:20:07] 2025-07-01 02:19:43,490 | INFO     | adding to output.list: log.45418292._000505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/ce/log.45418292._000505.job.log.tg
[2025-06-30 22:20:07] 2025-07-01 02:19:43,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-30 22:20:07] 2025-07-01 02:19:43,491 | INFO     | summary of transferred files:
[2025-06-30 22:20:07] 2025-07-01 02:19:43,491 | INFO     |  -- lfn=log.45418292._000505.job.log.tgz.1, status_code=0, status=transferred
[2025-06-30 22:20:07] 2025-07-01 02:19:43,491 | INFO     | stage-out finished correctly
[2025-06-30 22:20:07] 2025-07-01 02:19:45,586 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-30 22:20:07] 2025-07-01 02:19:45,636 | INFO     | job 6714825014 has state=finished
[2025-06-30 22:20:07] 2025-07-01 02:19:45,636 | INFO     | preparing for final server update for job 6714825014 in state='finished'
[2025-06-30 22:20:07] 2025-07-01 02:19:45,637 | INFO     | this job has now completed (state=finished)
[2025-06-30 22:20:07] 2025-07-01 02:19:45,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-30 22:20:07] 2025-07-01 02:19:45,637 | INFO     | log transfer has been attempted: DONE
[2025-06-30 22:20:07] 2025-07-01 02:19:45,637 | INFO     | job 6714825014 has finished - writing final server update
[2025-06-30 22:20:07] 2025-07-01 02:19:45,638 | INFO     | total number of processed events: 400 (read)
[2025-06-30 22:20:07] 2025-07-01 02:19:45,641 | INFO     | executing command: lscpu
[2025-06-30 22:20:07] 2025-07-01 02:19:45,698 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-30 22:20:07] 2025-07-01 02:19:45,813 | INFO     | monitor loop #249: job 0:6714825014 is in state 'finished'
[2025-06-30 22:20:07] 2025-07-01 02:19:45,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-30 22:20:07] 2025-07-01 02:19:48,317 | INFO     | monitor loop #250: job 0:6714825014 is in state 'finished'
[2025-06-30 22:20:07] 2025-07-01 02:19:48,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-30 22:20:07] 2025-07-01 02:19:50,820 | INFO     | monitor loop #251: job 0:6714825014 is in state 'finished'
[2025-06-30 22:20:07] 2025-07-01 02:19:50,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-30 22:20:07] 2025-07-01 02:19:52,835 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-30 22:20:07] 2025-07-01 02:19:52,844 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 1686.7526785714288
[2025-06-30 22:20:07] 2025-07-01 02:19:52,850 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6714825014/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 22:20:07] 2025-07-01 02:19:52,850 | INFO     | extracted standard info from prmon json
[2025-06-30 22:20:07] 2025-07-01 02:19:52,850 | INFO     | extracted standard memory fields from prmon json
[2025-06-30 22:20:07] 2025-07-01 02:19:52,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-30 22:20:07] 2025-07-01 02:19:52,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-30 22:20:07] 2025-07-01 02:19:52,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | fitting pss+swap vs Time
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | sum of square deviations: 30168007.5
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | sum of deviations: 957119066.5000004
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | mean x: 1751334847.5
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | mean y: 2876417.5434782607
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | -- intersect: -55560487333.54682
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | intersect: -55560487333.54682
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | chi2: 0.08556863077248493
[2025-06-30 22:20:07] 2025-07-01 02:19:52,852 | INFO     | -- intersect: -55560487333.54682
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | current memory leak: 31.73 B/s (using 46 data points, chi2=0.09)
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | could have reported an average CPU frequency of 1522 MHz (5 samples)
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | ..............................
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . Timing measurements:
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . get job = 0 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . initial setup = 2 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . payload setup = 6 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . stage-in = 0 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . payload execution = 3212 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . stage-out = 0 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | . log creation = 0 s
[2025-06-30 22:20:07] 2025-07-01 02:19:52,853 | INFO     | ..............................
[2025-06-30 22:20:07] 2025-07-01 02:19:53,145 | INFO     | 
[2025-06-30 22:20:07] 2025-07-01 02:19:53,145 | INFO     | job summary report
[2025-06-30 22:20:07] 2025-07-01 02:19:53,145 | INFO     | --------------------------------------------------
[2025-06-30 22:20:07] 2025-07-01 02:19:53,145 | INFO     | PanDA job id: 6714825014
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | task id: 45418292
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | errors: (none)
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | pilot state: finished 
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | transexitcode: 0
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | exeerrorcode: 0
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | exeerrordiag: 
[2025-06-30 22:20:07] 2025-07-01 02:19:53,146 | INFO     | exitcode: 0
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | exitmsg: OK
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | cpuconsumptiontime: 33421 s
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | nevents: 400
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | neventsw: 0
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | pid: 3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | pgrp: 3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | corecount: 12
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | event service: False
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | sizes: {0: 2365750, 1: 2366613, 4: 2366875, 11: 2366903, 3222: 2392401, 3223: 2401413, 3225: 2401597, 3232: 2401823}
[2025-06-30 22:20:07] 2025-07-01 02:19:53,147 | INFO     | --------------------------------------------------
[2025-06-30 22:20:07] 2025-07-01 02:19:53,148 | INFO     | 
[2025-06-30 22:20:07] 2025-07-01 02:19:53,148 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-30 22:20:07] 2025-07-01 02:19:53,168 | INFO     | job 6714825014 has completed (purged errors)
[2025-06-30 22:20:07] 2025-07-01 02:19:53,169 | INFO     | overall cleanup function is called
[2025-06-30 22:20:07] 2025-07-01 02:19:54,010 | INFO     | PID=3222305 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-30 22:20:07] 2025-07-01 02:19:54,010 | INFO     | .. there are 2 such processes running
[2025-06-30 22:20:07] 2025-07-01 02:19:54,176 | INFO     | --- collectZombieJob: --- 10, [3229296]
[2025-06-30 22:20:07] 2025-07-01 02:19:54,176 | INFO     | zombie collector waiting for pid 3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:54,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-30 22:20:07] 2025-07-01 02:19:54,176 | INFO     | collected zombie processes
[2025-06-30 22:20:07] 2025-07-01 02:19:54,176 | INFO     | will attempt to kill all subprocesses of pid=3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:54,293 | INFO     | process IDs to be killed: [3229296] (in reverse order)
[2025-06-30 22:20:07] 2025-07-01 02:19:54,343 | WARNING  | found no corresponding commands to process id(s)
[2025-06-30 22:20:07] 2025-07-01 02:19:54,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-30 22:20:07] 2025-07-01 02:19:54,348 | INFO     | did not find any defunct processes belonging to 3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:54,351 | INFO     | did not find any defunct processes belonging to 3229296
[2025-06-30 22:20:07] 2025-07-01 02:19:54,352 | INFO     | ready for new job
[2025-06-30 22:20:07] 2025-07-01 02:19:54,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-30 22:20:07] 2025-07-01 02:19:54,353 | INFO     | ***************************************
[2025-06-30 22:20:07] 2025-07-01 02:19:54,353 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-30 22:20:07] 2025-07-01 02:19:54,353 | INFO     | ***************************************
[2025-06-30 22:20:07] 2025-07-01 02:19:54,353 | INFO     | 
[2025-06-30 22:20:07] 2025-07-01 02:19:54,374 | INFO     | architecture information:
[2025-06-30 22:20:07] 2025-07-01 02:19:54,374 | INFO     | executing command: cat /etc/os-release
[2025-06-30 22:20:07] 2025-07-01 02:19:54,385 | INFO     | cat /etc/os-release:
[2025-06-30 22:20:07] NAME="CentOS Linux"
[2025-06-30 22:20:07] VERSION="7 (Core)"
[2025-06-30 22:20:07] ID="centos"
[2025-06-30 22:20:07] ID_LIKE="rhel fedora"
[2025-06-30 22:20:07] VERSION_ID="7"
[2025-06-30 22:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-30 22:20:07] ANSI_COLOR="0;31"
[2025-06-30 22:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-30 22:20:07] HOME_URL="https://www.centos.org/"
[2025-06-30 22:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-30 22:20:07] 
[2025-06-30 22:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-30 22:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-30 22:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-30 22:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-30 22:20:07] 
[2025-06-30 22:20:07] 2025-07-01 02:19:54,385 | INFO     | ***************************************
[2025-06-30 22:20:07] 2025-07-01 02:19:54,888 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-06-30 22:20:07] 2025-07-01 02:19:54,907 | INFO     | sufficient remaining disk space (401652842496 B)
[2025-06-30 22:20:07] 2025-07-01 02:19:54,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | INFO     | current server update state: UPDATING_FINAL
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | INFO     | update_server=False
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-30 22:20:07] 2025-07-01 02:19:54,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-30 22:20:07] 2025-07-01 02:19:54,909 | INFO     | found 0 job(s) in 20 queues
[2025-06-30 22:20:07] 2025-07-01 02:19:54,909 | INFO     | aborting loop
[2025-06-30 22:20:07] 2025-07-01 02:19:54,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-30 22:20:07] 2025-07-01 02:19:54,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-30 22:20:07] 2025-07-01 02:19:55,107 | INFO     | all payload control threads have been joined
[2025-06-30 22:20:07] 2025-07-01 02:19:55,675 | INFO     | all job control threads have been joined
[2025-06-30 22:20:07] 2025-07-01 02:19:55,910 | INFO     | all data control threads have been joined
[2025-06-30 22:20:07] 2025-07-01 02:19:55,913 | INFO     | [job] retrieve thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:55,915 | INFO     | [job] job monitor thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:55,923 | INFO     | [payload] failed_post thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:55,967 | INFO     | [payload] validate_pre thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,112 | INFO     | [payload] control thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-30 22:20:07] 2025-07-01 02:19:56,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,505 | INFO     | [data] copytool_in thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,510 | INFO     | [payload] validate_post thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,680 | INFO     | [job] control thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,914 | INFO     | [data] copytool_out thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:56,914 | INFO     | [data] control thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:57,135 | INFO     | [payload] execute_payloads thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:57,278 | INFO     | [job] validate thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:57,389 | INFO     | [job] create_data_payload thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:19:57,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-30 22:20:07] 2025-07-01 02:19:58,915 | INFO     | [job] queue monitor thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:20:00,150 | INFO     | [data] queue_monitor thread has finished
[2025-06-30 22:20:07] 2025-07-01 02:20:02,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409159321408)>', '<ExcThread(monitor, started 140408453592832)>']
[2025-06-30 22:20:07] 2025-07-01 02:20:02,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-30 22:20:07] 2025-07-01 02:20:02,951 | INFO     | [monitor] control thread has ended
[2025-06-30 22:20:07] 2025-07-01 02:20:07,262 | INFO     | all workflow threads have been joined
[2025-06-30 22:20:07] 2025-07-01 02:20:07,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-30 22:20:07] 2025-07-01 02:20:07,263 | INFO     | traces error code: 0
[2025-06-30 22:20:07] 2025-07-01 02:20:07,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-30 22:20:07] 2025-07-01 02:20:07,340 [wrapper] ==== pilot stdout END ====
[2025-06-30 22:20:07] 2025-07-01 02:20:07,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-30 22:20:07] 2025-07-01 02:20:07,346 [wrapper] pilotpid: 3222305
[2025-06-30 22:20:07] 2025-07-01 02:20:07,349 [wrapper] Pilot exit status: 0
[2025-06-30 22:20:07] 2025-07-01 02:20:07,360 [wrapper] pandaids: 6714825014
[2025-06-30 22:20:07] 2025-07-01 02:20:07,396 [wrapper] cleanup supervisor_pilot 3269592 3222306
[2025-06-30 22:20:07] 2025-07-01 02:20:07,398 [wrapper] Test setup, not cleaning
[2025-06-30 22:20:07] 2025-07-01 02:20:07,401 [wrapper] apfmon messages muted
[2025-06-30 22:20:07] 2025-07-01 02:20:07,403 [wrapper] ==== wrapper stdout END ====
[2025-06-30 22:20:07] 2025-07-01 02:20:07,405 [wrapper] ==== wrapper stderr END ====
[2025-06-30 22:20:07]  *** Error codes and diagnostics ***
[2025-06-30 22:20:07]     "exeErrorCode": 0,
[2025-06-30 22:20:07]     "exeErrorDiag": "",
[2025-06-30 22:20:07]     "pilotErrorCode": 0,
[2025-06-30 22:20:07]     "pilotErrorDiag": "",
[2025-06-30 22:20:07]  *** Listing of results directory ***
[2025-06-30 22:20:07] total 435892
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc    530466 Jun 30 17:13 pilot3.tar.gz
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc      5112 Jun 30 17:32 queuedata.json
[2025-06-30 22:20:07] -rwx------ 1 boinc boinc     36292 Jun 30 17:32 runpilot2-wrapper.sh
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc       100 Jun 30 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-30 22:20:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 30 21:25 run_atlas
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc       105 Jun 30 21:25 job.xml
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc 253118086 Jun 30 21:25 EVNT.45418289._000021.pool.root.1
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc     15095 Jun 30 21:25 start_atlas.sh
[2025-06-30 22:20:07] drwxrwx--x 2 boinc boinc      4096 Jun 30 21:25 shared
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc    542895 Jun 30 21:25 input.tar.gz
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc      7599 Jun 30 21:25 init_data.xml
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc         0 Jun 30 21:25 boinc_lockfile
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc      2553 Jun 30 21:25 pandaJob.out
[2025-06-30 22:20:07] -rw------- 1 boinc boinc    970041 Jun 30 21:25 agis_schedconf.cvmfs.json
[2025-06-30 22:20:07] -rw------- 1 boinc boinc   1574086 Jun 30 21:25 agis_ddmendpoints.agis.ALL.json
[2025-06-30 22:20:07] drwx------ 4 boinc boinc      4096 Jun 30 21:25 pilot3
[2025-06-30 22:20:07] -rw------- 1 boinc boinc 188006882 Jun 30 22:19 HITS.45418292._000505.pool.root.1
[2025-06-30 22:20:07] -rw------- 1 boinc boinc        95 Jun 30 22:19 pilot_heartbeat.json
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc       529 Jun 30 22:19 boinc_task_state.xml
[2025-06-30 22:20:07] -rw------- 1 boinc boinc      1029 Jun 30 22:19 memory_monitor_summary.json
[2025-06-30 22:20:07] -rw------- 1 boinc boinc    341082 Jun 30 22:19 log.45418292._000505.job.log.tgz.1
[2025-06-30 22:20:07] -rw------- 1 boinc boinc      7773 Jun 30 22:19 heartbeat.json
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc      8192 Jun 30 22:20 boinc_mmap_file
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc        27 Jun 30 22:20 wrapper_checkpoint.txt
[2025-06-30 22:20:07] -rw------- 1 boinc boinc      4488 Jun 30 22:20 pilotlog.txt
[2025-06-30 22:20:07] -rw------- 1 boinc boinc    343723 Jun 30 22:20 log.45418292._000505.job.log.1
[2025-06-30 22:20:07] -rw------- 1 boinc boinc       357 Jun 30 22:20 output.list
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc       620 Jun 30 22:20 runtime_log
[2025-06-30 22:20:07] -rw------- 1 boinc boinc    706560 Jun 30 22:20 result.tar.gz
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc      8729 Jun 30 22:20 runtime_log.err
[2025-06-30 22:20:07] -rw------- 1 boinc boinc       649 Jun 30 22:20 4zqLDmwHbq7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDh5KDmU1XcDo.diag
[2025-06-30 22:20:07] -rw-r--r-- 1 boinc boinc     21451 Jun 30 22:20 stderr.txt
[2025-06-30 22:20:07] HITS file was successfully produced:
[2025-06-30 22:20:07] -rw------- 1 boinc boinc 188006882 Jun 30 22:19 shared/HITS.pool.root.1
[2025-06-30 22:20:07]  *** Contents of shared directory: ***
[2025-06-30 22:20:07] total 432040
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc 253118086 Jun 30 21:25 ATLAS.root_0
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc     15095 Jun 30 21:25 start_atlas.sh
[2025-06-30 22:20:07] -rw-r--r-- 2 boinc boinc    542895 Jun 30 21:25 input.tar.gz
[2025-06-30 22:20:07] -rw------- 1 boinc boinc 188006882 Jun 30 22:19 HITS.pool.root.1
[2025-06-30 22:20:07] -rw------- 1 boinc boinc    706560 Jun 30 22:20 result.tar.gz
22:20:08 (3218374): run_atlas exited; CPU time 33458.311605
22:20:08 (3218374): called boinc_finish(0)

</stderr_txt>
]]>

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