Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-01 02:56:58 (26724): Detected: vboxwrapper 26206
2025-07-01 02:56:58 (26724): Detected: BOINC client v8.0.2
2025-07-01 02:56:59 (26724): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-07-01 02:56:59 (26724): Successfully copied 'init_data.xml' to the shared directory.
2025-07-01 02:57:00 (26724): Create VM. (boinc_9135f8c783449128, slot#3)
2025-07-01 02:57:00 (26724): Setting Memory Size for VM. (6600MB)
2025-07-01 02:57:00 (26724): Setting CPU Count for VM. (4)
2025-07-01 02:57:01 (26724): Setting Chipset Options for VM.
2025-07-01 02:57:01 (26724): Setting Graphics Controller Options for VM.
2025-07-01 02:57:01 (26724): Setting Boot Options for VM.
2025-07-01 02:57:01 (26724): Setting Network Configuration for NAT.
2025-07-01 02:57:02 (26724): Enabling VM Network Access.
2025-07-01 02:57:02 (26724): Disabling USB Support for VM.
2025-07-01 02:57:02 (26724): Disabling COM Port Support for VM.
2025-07-01 02:57:02 (26724): Disabling LPT Port Support for VM.
2025-07-01 02:57:03 (26724): Disabling Audio Support for VM.
2025-07-01 02:57:03 (26724): Disabling Clipboard Support for VM.
2025-07-01 02:57:03 (26724): Disabling Drag and Drop Support for VM.
2025-07-01 02:57:03 (26724): Adding storage controller(s) to VM.
2025-07-01 02:57:04 (26724): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-01 02:57:04 (26724): Adding VirtualBox Guest Additions to VM.
2025-07-01 02:57:04 (26724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-01 02:57:05 (26724): forwarding host port 65506 to guest port 80
2025-07-01 02:57:05 (26724): Enabling remote desktop for VM.
2025-07-01 02:57:05 (26724): Enabling shared directory for VM.
2025-07-01 02:57:06 (26724): Starting VM using VBoxManage interface. (boinc_9135f8c783449128, slot#3)
2025-07-01 02:57:12 (26724): Successfully started VM. (PID = '27096')
2025-07-01 02:57:12 (26724): Reporting VM Process ID to BOINC.
2025-07-01 02:57:12 (26724): Guest Log: BIOS: VirtualBox 7.0.14
2025-07-01 02:57:12 (26724): Guest Log: CPUID EDX: 0x178bfbff
2025-07-01 02:57:12 (26724): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-01 02:57:12 (26724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-01 02:57:12 (26724): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-01 02:57:12 (26724): Detected: Web Application Enabled (http://localhost:65506)
2025-07-01 02:57:12 (26724): Detected: Remote Desktop Enabled (localhost:65531)
2025-07-01 02:57:12 (26724): Preference change detected
2025-07-01 02:57:12 (26724): Setting CPU throttle for VM. (100%)
2025-07-01 02:57:13 (26724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-01 02:57:14 (26724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-01 02:57:14 (26724): Guest Log: BIOS: Booting from Hard Disk...
2025-07-01 02:57:17 (26724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-01 02:57:17 (26724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-01 02:57:17 (26724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-01 02:57:22 (26724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-01 02:57:22 (26724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-01 02:57:28 (26724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000198 main     Log opened 2025-07-01T02:57:27.013760000Z
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000349 main     OS Product: Linux
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000389 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000416 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000456 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000457 main     Process ID: 1370
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.000458 main     Package type: LINUX_64BITS_GENERIC
2025-07-01 02:57:28 (26724): Guest Log: 00:00:00.001224 main     5.2.32 r132073 started. Verbose level = 0
2025-07-01 02:57:28 (26724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-01 02:57:28 (26724): Guest Log: [INFO] Mounting shared directory
2025-07-01 02:57:28 (26724): Guest Log: [INFO] Checking for init_data.xml
2025-07-01 02:57:38 (26724): Guest Log: 00:00:10.008928 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 225 691 000ns (GuestNow=1 751 335 058 790 377 000 ns GuestLast=1 751 338 647 016 068 000 ns fSetTimeLastLoop=true )
2025-07-01 02:57:39 (26724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-01 02:57:39 (26724): Guest Log: [INFO] Detected branch: prod
2025-07-01 02:57:39 (26724): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-01 02:57:39 (26724): Guest Log: Copying input files
2025-07-01 02:57:41 (26724): Guest Log: Copied input files into RunAtlas.
2025-07-01 02:57:41 (26724): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-07-01 02:57:49 (26724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-01 02:57:49 (26724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-01 02:57:49 (26724): Guest Log: 2.6.3.0 1647 0 33516 147787 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-07-01 02:57:49 (26724): Guest Log: copied the webapp to /var/www
2025-07-01 02:57:49 (26724): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-01 02:57:49 (26724): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-01 02:57:50 (26724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-01 02:57:50 (26724): Guest Log:  *** Starting ATLAS job. (PandaID=6714288371 taskID=45418263) ***
2025-07-01 04:37:26 (26724): Status Report: Elapsed Time: '6000.000000'
2025-07-01 04:37:26 (26724): Status Report: CPU Time: '22034.109375'
2025-07-01 06:17:30 (26724): Status Report: Elapsed Time: '12000.000000'
2025-07-01 06:17:30 (26724): Status Report: CPU Time: '45903.640625'
2025-07-01 07:29:20 (26724): Guest Log:  *** Job finished ***
2025-07-01 07:29:20 (26724): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:06,529 | INFO     | end of generic workflow (traces error code: 0)
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:06,529 | INFO     | traces error code: 0
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:06,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:16,757 [wrapper] supervise_pilot (15 min periods counter: 19)
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,105 | INFO     | PID=5964 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,105 | INFO     | found 0 job(s) in 20 queues
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,106 | INFO     | [monitor] control thread has ended
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,197 [wrapper] ==== pilot stdout END ====
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,207 [wrapper] ==== wrapper stdout RESUME ====
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,213 [wrapper] pilotpid: 5964
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,218 [wrapper] Pilot exit status: 0
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,290 [wrapper] pandaids: 6714288371
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,325 [wrapper] cleanup supervisor_pilot 21170 5965
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,330 [wrapper] Test setup, not cleaning
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,336 [wrapper] apfmon messages muted
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,342 [wrapper] ==== wrapper stdout END ====
2025-07-01 07:29:20 (26724): Guest Log: 2025-07-01 06:29:19,375 [wrapper] ==== wrapper stderr END ====
2025-07-01 07:29:20 (26724): Guest Log:  *** Error codes and diagnostics ***
2025-07-01 07:29:20 (26724): Guest Log:     "exeErrorCode": 0,
2025-07-01 07:29:20 (26724): Guest Log:     "exeErrorDiag": "",
2025-07-01 07:29:20 (26724): Guest Log:     "pilotErrorCode": 0,
2025-07-01 07:29:20 (26724): Guest Log:     "pilotErrorDiag": "",
2025-07-01 07:29:20 (26724): Guest Log:  *** Listing of results directory ***
2025-07-01 07:29:20 (26724): Guest Log: total 190432
2025-07-01 07:29:20 (26724): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 30 16:12 pilot3.tar.gz
2025-07-01 07:29:20 (26724): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 30 16:37 queuedata.json
2025-07-01 07:29:20 (26724): Guest Log: -rwx------. 1 atlas atlas     36292 Jun 30 16:38 runpilot2-wrapper.sh
2025-07-01 07:29:20 (26724): Guest Log: -rwxr-xr-x. 1 atlas atlas      9291 Jul  1 01:57 init_data.xml
2025-07-01 07:29:20 (26724): Guest Log: -rwxr-xr-x. 1 atlas atlas    542895 Jul  1 01:57 input.tar.gz
2025-07-01 07:29:20 (26724): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul  1 01:57 start_atlas.sh
2025-07-01 07:29:20 (26724): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul  1 01:57 EVNT.45418260._000008.pool.root.1 -> /data/./ATLAS.root_0
2025-07-01 07:29:20 (26724): Guest Log: -rw-r--r--. 1 atlas atlas      2584 Jul  1 01:57 pandaJob.out
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas    970041 Jul  1 01:59 agis_schedconf.cvmfs.json
2025-07-01 07:29:20 (26724): Guest Log: drwx------. 4 atlas atlas      4096 Jul  1 01:59 pilot3
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas 187835702 Jul  1 06:28 HITS.45418263._000188.pool.root.1
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas        95 Jul  1 06:28 pilot_heartbeat.json
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas      1033 Jul  1 06:28 memory_monitor_summary.json
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas   1574086 Jul  1 06:28 agis_ddmendpoints.agis.ALL.json
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas    342815 Jul  1 06:28 log.45418263._000188.job.log.tgz.1
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas      7813 Jul  1 06:28 heartbeat.json
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas       744 Jul  1 06:29 pilotlog.txt
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas   1349316 Jul  1 06:29 log.45418263._000188.job.log.1
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas       357 Jul  1 06:29 output.list
2025-07-01 07:29:20 (26724): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul  1 06:29 runtime_log
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas   1710080 Jul  1 06:29 result.tar.gz
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas       655 Jul  1 06:29 U2kKDmQhWq7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEtlKDmjJYdem.diag
2025-07-01 07:29:20 (26724): Guest Log: -rw-r--r--. 1 atlas atlas      8588 Jul  1 06:29 runtime_log.err
2025-07-01 07:29:20 (26724): Guest Log: Looking for outputfile HITS.45418263._000188.pool.root.1
2025-07-01 07:29:20 (26724): Guest Log: HITS file was successfully produced
2025-07-01 07:29:20 (26724): Guest Log: -rw-------. 1 atlas atlas 187835702 Jul  1 06:28 /home/atlas/RunAtlas/HITS.45418263._000188.pool.root.1
2025-07-01 07:29:21 (26724): Guest Log: Successfully finished the ATLAS job!
2025-07-01 07:29:21 (26724): Guest Log: Copying the results back to the shared directory!
2025-07-01 07:29:21 (26724): Guest Log:  *** Contents of shared directory: ***
2025-07-01 07:29:21 (26724): Guest Log: total 432028
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root 252272055 Jul  1 01:56 ATLAS.root_0
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root 187835702 Jul  1 06:29 HITS.pool.root.1
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root      9291 Jul  1 01:56 init_data.xml
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root    542895 Jun 30 17:03 input.tar.gz
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root   1710080 Jul  1 06:29 result.tar.gz
2025-07-01 07:29:21 (26724): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 30 17:03 start_atlas.sh
2025-07-01 07:29:21 (26724): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-01 07:29:22 (26724): VM Completion File Detected.
2025-07-01 07:29:22 (26724): Powering off VM.
2025-07-01 07:29:24 (26724): Successfully stopped VM.
2025-07-01 07:29:24 (26724): Deregistering VM. (boinc_9135f8c783449128, slot#3)
2025-07-01 07:29:24 (26724): Removing network bandwidth throttle group from VM.
2025-07-01 07:29:24 (26724): Removing VM from VirtualBox.
07:29:29 (26724): called boinc_finish(0)

</stderr_txt>
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