Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:37:57 (1257148): wrapper (7.7.26015): starting
14:37:57 (1257148): wrapper: running run_atlas (--nthreads 4)
[2025-06-30 14:37:57] Arguments: --nthreads 4
[2025-06-30 14:37:57] Threads: 4
[2025-06-30 14:37:57] Checking for CVMFS
[2025-06-30 14:37:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-30 14:37:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-30 14:37:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-30 14:38:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-30 14:38:00] 2.9.2.0 1257343 0 29620 147762 3 1 32233117 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-30 14:38:00] CVMFS is ok
[2025-06-30 14:38:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-30 14:38:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-30 14:38:00] Further information can be found at the LHC@home message board.
[2025-06-30 14:38:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-30 14:38:00] Checking for apptainer binary...
[2025-06-30 14:38:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-30 14:38:00] Running /usr/bin/apptainer --version
[2025-06-30 14:38:00] apptainer version 1.4.1-1.1
[2025-06-30 14:38:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-30 14:38:00] thA314
[2025-06-30 14:38:00] apptainer works
[2025-06-30 14:38:00] Set ATHENA_PROC_NUMBER=4
[2025-06-30 14:38:00] Set ATHENA_CORE_NUMBER=4
[2025-06-30 14:38:00] Starting ATLAS job with PandaID=6713073594
[2025-06-30 14:38:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-30 16:17:05]  *** The last 200 lines of the pilot log: ***
[2025-06-30 16:17:05]  lfn=log.45400058._000037.job.log.tgz.1
[2025-06-30 16:17:05]  mtime=0
[2025-06-30 16:17:05]  protocol_id=None
[2025-06-30 16:17:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-30 16:17:05]  replicas=None
[2025-06-30 16:17:05]  scope=mc23_13p6TeV
[2025-06-30 16:17:05]  status=None
[2025-06-30 16:17:05]  status_code=0
[2025-06-30 16:17:05]  storage_token=
[2025-06-30 16:17:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6713073594/log.45400058._000037.job.log.tgz.1
[2025-06-30 16:17:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/c7/log.45400058._000037.job.log.tgz.1
[2025-06-30 16:17:05]  workdir=None
[2025-06-30 16:17:05] ]
[2025-06-30 16:17:05] 2025-06-30 14:16:26,131 | INFO     | transferring file log.45400058._000037.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6713073594/log.45400058._000037.job.log.tgz.1 to /local/data/boinc/
[2025-06-30 16:17:05] 2025-06-30 14:16:26,131 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6713073594/log.45400058._000037.job.log.tgz.1 /local/data/boinc/slots/0/log.45400058._0000
[2025-06-30 16:17:05] 2025-06-30 14:16:26,150 | INFO     | adding to output.list: log.45400058._000037.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/c7/log.45400058._000037.job.log.tg
[2025-06-30 16:17:05] 2025-06-30 14:16:26,151 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-30 16:17:05] 2025-06-30 14:16:26,151 | INFO     | summary of transferred files:
[2025-06-30 16:17:05] 2025-06-30 14:16:26,151 | INFO     |  -- lfn=log.45400058._000037.job.log.tgz.1, status_code=0, status=transferred
[2025-06-30 16:17:05] 2025-06-30 14:16:26,151 | INFO     | stage-out finished correctly
[2025-06-30 16:17:05] 2025-06-30 14:16:26,706 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-30 16:17:05] 2025-06-30 14:16:27,518 | WARNING  | process 1268051 can no longer be monitored (due to stat problems) - aborting
[2025-06-30 16:17:05] 2025-06-30 14:16:27,518 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6713073594/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 16:17:05] 2025-06-30 14:16:27,562 | INFO     | number of running child processes to parent process 1268051: 1
[2025-06-30 16:17:05] 2025-06-30 14:16:27,562 | INFO     | maximum number of monitored processes: 6
[2025-06-30 16:17:05] 2025-06-30 14:16:28,351 | INFO     | job 6713073594 has state=finished
[2025-06-30 16:17:05] 2025-06-30 14:16:28,351 | INFO     | preparing for final server update for job 6713073594 in state='finished'
[2025-06-30 16:17:05] 2025-06-30 14:16:28,923 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-30 16:17:05] 2025-06-30 14:16:28,924 | INFO     | this job has now completed (state=finished)
[2025-06-30 16:17:05] 2025-06-30 14:16:28,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-30 16:17:05] 2025-06-30 14:16:28,924 | INFO     | log transfer has been attempted: DONE
[2025-06-30 16:17:05] 2025-06-30 14:16:28,924 | INFO     | job 6713073594 has finished - writing final server update
[2025-06-30 16:17:05] 2025-06-30 14:16:28,924 | INFO     | total number of processed events: 400 (read)
[2025-06-30 16:17:05] 2025-06-30 14:16:28,925 | INFO     | executing command: lscpu
[2025-06-30 16:17:05] 2025-06-30 14:16:28,945 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-30 16:17:05] 2025-06-30 14:16:30,065 | INFO     | monitor loop #452: job 0:6713073594 is in state 'finished'
[2025-06-30 16:17:05] 2025-06-30 14:16:30,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,375 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-30 16:17:05] 2025-06-30 14:16:32,377 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3439.6683125
[2025-06-30 16:17:05] 2025-06-30 14:16:32,378 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6713073594/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,379 | INFO     | extracted standard info from prmon json
[2025-06-30 16:17:05] 2025-06-30 14:16:32,379 | INFO     | extracted standard memory fields from prmon json
[2025-06-30 16:17:05] 2025-06-30 14:16:32,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-30 16:17:05] 2025-06-30 14:16:32,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-30 16:17:05] 2025-06-30 14:16:32,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | fitting pss+swap vs Time
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | sum of square deviations: 226022842.5
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | sum of deviations: -19927729215.5
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | mean x: 1751290133.5
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | mean y: 2544878.855555556
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | -- intersect: 154408334896.1404
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | intersect: 154408334896.1404
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | chi2: 0.1583992309098537
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | -- intersect: 154408334896.1404
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | current memory leak: -88.17 B/s (using 90 data points, chi2=0.16)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,380 | INFO     | could have reported an average CPU frequency of 3718 MHz (7 samples)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | ..............................
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . Timing measurements:
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . get job = 0 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . initial setup = 1 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . payload setup = 5 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . stage-in = 0 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . payload execution = 5872 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . stage-out = 0 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | . log creation = 0 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,381 | INFO     | ..............................
[2025-06-30 16:17:05] 2025-06-30 14:16:32,758 | INFO     | 
[2025-06-30 16:17:05] 2025-06-30 14:16:32,758 | INFO     | job summary report
[2025-06-30 16:17:05] 2025-06-30 14:16:32,758 | INFO     | --------------------------------------------------
[2025-06-30 16:17:05] 2025-06-30 14:16:32,758 | INFO     | PanDA job id: 6713073594
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | task id: 45400058
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | errors: (none)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | pilot state: finished 
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | transexitcode: 0
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | exeerrorcode: 0
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | exeerrordiag: 
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | exitcode: 0
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | exitmsg: OK
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | cpuconsumptiontime: 22404 s
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | nevents: 400
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | neventsw: 0
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | pid: 1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | pgrp: 1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | corecount: 4
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | event service: False
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | sizes: {0: 2366667, 4: 2366929, 11: 2366957, 5882: 2402830, 5883: 2402830, 5888: 2403024}
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | --------------------------------------------------
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | 
[2025-06-30 16:17:05] 2025-06-30 14:16:32,759 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-30 16:17:05] 2025-06-30 14:16:32,782 | INFO     | job 6713073594 has completed (purged errors)
[2025-06-30 16:17:05] 2025-06-30 14:16:32,782 | INFO     | overall cleanup function is called
[2025-06-30 16:17:05] 2025-06-30 14:16:33,788 | INFO     | --- collectZombieJob: --- 10, [1268051]
[2025-06-30 16:17:05] 2025-06-30 14:16:33,788 | INFO     | zombie collector waiting for pid 1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:33,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-30 16:17:05] 2025-06-30 14:16:33,788 | INFO     | collected zombie processes
[2025-06-30 16:17:05] 2025-06-30 14:16:33,788 | INFO     | will attempt to kill all subprocesses of pid=1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:33,836 | INFO     | process IDs to be killed: [1268051] (in reverse order)
[2025-06-30 16:17:05] 2025-06-30 14:16:33,870 | WARNING  | found no corresponding commands to process id(s)
[2025-06-30 16:17:05] 2025-06-30 14:16:33,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-30 16:17:05] 2025-06-30 14:16:33,872 | INFO     | did not find any defunct processes belonging to 1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:33,873 | INFO     | did not find any defunct processes belonging to 1268051
[2025-06-30 16:17:05] 2025-06-30 14:16:33,873 | INFO     | ready for new job
[2025-06-30 16:17:05] 2025-06-30 14:16:33,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-30 16:17:05] 2025-06-30 14:16:33,874 | INFO     | ***************************************
[2025-06-30 16:17:05] 2025-06-30 14:16:33,874 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-30 16:17:05] 2025-06-30 14:16:33,874 | INFO     | ***************************************
[2025-06-30 16:17:05] 2025-06-30 14:16:33,874 | INFO     | 
[2025-06-30 16:17:05] 2025-06-30 14:16:33,875 | INFO     | architecture information:
[2025-06-30 16:17:05] 2025-06-30 14:16:33,875 | INFO     | executing command: cat /etc/os-release
[2025-06-30 16:17:05] 2025-06-30 14:16:33,888 | INFO     | cat /etc/os-release:
[2025-06-30 16:17:05] NAME="CentOS Linux"
[2025-06-30 16:17:05] VERSION="7 (Core)"
[2025-06-30 16:17:05] ID="centos"
[2025-06-30 16:17:05] ID_LIKE="rhel fedora"
[2025-06-30 16:17:05] VERSION_ID="7"
[2025-06-30 16:17:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-30 16:17:05] ANSI_COLOR="0;31"
[2025-06-30 16:17:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-30 16:17:05] HOME_URL="https://www.centos.org/"
[2025-06-30 16:17:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-30 16:17:05] 
[2025-06-30 16:17:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-30 16:17:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-30 16:17:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-30 16:17:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-30 16:17:05] 
[2025-06-30 16:17:05] 2025-06-30 14:16:33,888 | INFO     | ***************************************
[2025-06-30 16:17:05] 2025-06-30 14:16:34,392 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | INFO     | sufficient remaining disk space (223746195456 B)
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | INFO     | current server update state: UPDATING_FINAL
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | INFO     | update_server=False
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-30 16:17:05] 2025-06-30 14:16:34,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-30 16:17:05] 2025-06-30 14:16:34,411 | INFO     | aborting loop
[2025-06-30 16:17:05] 2025-06-30 14:16:34,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-30 16:17:05] 2025-06-30 14:16:35,295 | INFO     | all payload control threads have been joined
[2025-06-30 16:17:05] 2025-06-30 14:16:35,304 | INFO     | all data control threads have been joined
[2025-06-30 16:17:05] 2025-06-30 14:16:35,416 | INFO     | [job] retrieve thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:35,416 | INFO     | [job] queue monitor thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:35,416 | INFO     | [job] job monitor thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:35,469 | INFO     | [payload] validate_pre thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:35,614 | INFO     | all job control threads have been joined
[2025-06-30 16:17:05] 2025-06-30 14:16:35,729 | INFO     | [payload] execute_payloads thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,002 | INFO     | [data] copytool_in thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,301 | INFO     | [payload] control thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,310 | INFO     | [data] control thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,372 | INFO     | [payload] validate_post thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,417 | INFO     | [data] copytool_out thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,620 | INFO     | [job] control thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,741 | INFO     | [job] validate thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,832 | INFO     | [job] create_data_payload thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:36,962 | INFO     | [payload] failed_post thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:37,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-30 16:17:05] 2025-06-30 14:16:41,262 | INFO     | [data] queue_monitor thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:44,651 | INFO     | job.realtimelogging is not enabled
[2025-06-30 16:17:05] 2025-06-30 14:16:45,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-30 16:17:05] 2025-06-30 14:16:47,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991232907072)>', '<ExcThread(monitor, started 139990717667072)>']
[2025-06-30 16:17:05] 2025-06-30 14:16:52,485 | INFO     | all workflow threads have been joined
[2025-06-30 16:17:05] 2025-06-30 14:16:52,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-30 16:17:05] 2025-06-30 14:16:52,486 | INFO     | traces error code: 0
[2025-06-30 16:17:05] 2025-06-30 14:16:52,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-30 16:17:05] 2025-06-30 14:17:05,427 | INFO     | PID=1261404 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-30 16:17:05] 2025-06-30 14:17:05,428 | INFO     | found 0 job(s) in 20 queues
[2025-06-30 16:17:05] 2025-06-30 14:17:05,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-30 16:17:05] 2025-06-30 14:17:05,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-30 16:17:05] 2025-06-30 14:17:05,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-30 16:17:05] 2025-06-30 14:17:05,428 | INFO     | [monitor] control thread has ended
[2025-06-30 16:17:05] 2025-06-30 14:17:05,503 [wrapper] ==== pilot stdout END ====
[2025-06-30 16:17:05] 2025-06-30 14:17:05,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-30 16:17:05] 2025-06-30 14:17:05,510 [wrapper] pilotpid: 1261404
[2025-06-30 16:17:05] 2025-06-30 14:17:05,514 [wrapper] Pilot exit status: 0
[2025-06-30 16:17:05] 2025-06-30 14:17:05,526 [wrapper] pandaids: 6713073594
[2025-06-30 16:17:05] 2025-06-30 14:17:05,549 [wrapper] cleanup supervisor_pilot 1280608 1261405
[2025-06-30 16:17:05] 2025-06-30 14:17:05,553 [wrapper] Test setup, not cleaning
[2025-06-30 16:17:05] 2025-06-30 14:17:05,557 [wrapper] apfmon messages muted
[2025-06-30 16:17:05] 2025-06-30 14:17:05,561 [wrapper] ==== wrapper stdout END ====
[2025-06-30 16:17:05] 2025-06-30 14:17:05,564 [wrapper] ==== wrapper stderr END ====
[2025-06-30 16:17:05]  *** Error codes and diagnostics ***
[2025-06-30 16:17:05]     "exeErrorCode": 0,
[2025-06-30 16:17:05]     "exeErrorDiag": "",
[2025-06-30 16:17:05]     "pilotErrorCode": 0,
[2025-06-30 16:17:05]     "pilotErrorDiag": "",
[2025-06-30 16:17:05]  *** Listing of results directory ***
[2025-06-30 16:17:05] total 524020
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc    550332 Jun 18 17:33 pilot3.tar.gz
[2025-06-30 16:17:05] -rwx------ 1 boinc boinc     36245 Jun 29 17:10 runpilot2-wrapper.sh
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc      5112 Jun 29 17:10 queuedata.json
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc       100 Jun 30 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-30 16:17:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 30 14:37 run_atlas
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc       105 Jun 30 14:37 job.xml
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc 292321076 Jun 30 14:37 EVNT.45400056._000002.pool.root.1
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc    564551 Jun 30 14:37 input.tar.gz
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc     15095 Jun 30 14:37 start_atlas.sh
[2025-06-30 16:17:05] drwxrwx--x 2 boinc boinc      4096 Jun 30 14:37 shared
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc         0 Jun 30 14:37 boinc_setup_complete
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc      6455 Jun 30 14:37 init_data.xml
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc         0 Jun 30 14:37 boinc_lockfile
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc      2612 Jun 30 14:38 pandaJob.out
[2025-06-30 16:17:05] -rw------- 1 boinc boinc    970774 Jun 30 14:38 agis_schedconf.cvmfs.json
[2025-06-30 16:17:05] -rw------- 1 boinc boinc   1574086 Jun 30 14:38 agis_ddmendpoints.agis.ALL.json
[2025-06-30 16:17:05] drwx------ 6 boinc boinc      4096 Jun 30 14:38 pilot3
[2025-06-30 16:17:05] -rw------- 1 boinc boinc 238743245 Jun 30 16:16 HITS.45400058._000037.pool.root.1
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc       530 Jun 30 16:16 boinc_task_state.xml
[2025-06-30 16:17:05] -rw------- 1 boinc boinc      1018 Jun 30 16:16 memory_monitor_summary.json
[2025-06-30 16:17:05] -rw------- 1 boinc boinc    253627 Jun 30 16:16 log.45400058._000037.job.log.tgz.1
[2025-06-30 16:17:05] -rw------- 1 boinc boinc      7749 Jun 30 16:16 heartbeat.json
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc      8192 Jun 30 16:16 boinc_mmap_file
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc        27 Jun 30 16:16 wrapper_checkpoint.txt
[2025-06-30 16:17:05] -rw------- 1 boinc boinc       747 Jun 30 16:17 pilotlog.txt
[2025-06-30 16:17:05] -rw------- 1 boinc boinc        95 Jun 30 16:17 pilot_heartbeat.json
[2025-06-30 16:17:05] -rw------- 1 boinc boinc    568566 Jun 30 16:17 log.45400058._000037.job.log.1
[2025-06-30 16:17:05] -rw------- 1 boinc boinc       357 Jun 30 16:17 output.list
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc       620 Jun 30 16:17 runtime_log
[2025-06-30 16:17:05] -rw------- 1 boinc boinc    839680 Jun 30 16:17 result.tar.gz
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc      8734 Jun 30 16:17 runtime_log.err
[2025-06-30 16:17:05] -rw------- 1 boinc boinc       659 Jun 30 16:17 24NNDm4q8p7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9X4KDmObcIAo.diag
[2025-06-30 16:17:05] -rw-r--r-- 1 boinc boinc     21625 Jun 30 16:17 stderr.txt
[2025-06-30 16:17:05] HITS file was successfully produced:
[2025-06-30 16:17:05] -rw------- 1 boinc boinc 238743245 Jun 30 16:16 shared/HITS.pool.root.1
[2025-06-30 16:17:05]  *** Contents of shared directory: ***
[2025-06-30 16:17:05] total 520016
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc 292321076 Jun 30 14:37 ATLAS.root_0
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc    564551 Jun 30 14:37 input.tar.gz
[2025-06-30 16:17:05] -rw-r--r-- 2 boinc boinc     15095 Jun 30 14:37 start_atlas.sh
[2025-06-30 16:17:05] -rw------- 1 boinc boinc 238743245 Jun 30 16:16 HITS.pool.root.1
[2025-06-30 16:17:05] -rw------- 1 boinc boinc    839680 Jun 30 16:17 result.tar.gz
16:17:07 (1257148): run_atlas exited; CPU time 22427.291516
16:17:07 (1257148): called boinc_finish(0)

</stderr_txt>
]]>

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