Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-30 10:41:36 (491723): Detected: vboxwrapper 26206
2025-06-30 10:41:36 (491723): Detected: BOINC client v8.2.4
2025-06-30 10:41:37 (491723): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-06-30 10:41:37 (491723): Successfully copied 'init_data.xml' to the shared directory.
2025-06-30 10:41:38 (491723): Create VM. (boinc_11de1814486999fd, slot#17)
2025-06-30 10:41:38 (491723): Setting Memory Size for VM. (4096MB)
2025-06-30 10:41:38 (491723): Setting CPU Count for VM. (1)
2025-06-30 10:41:39 (491723): Setting Chipset Options for VM.
2025-06-30 10:41:39 (491723): Setting Graphics Controller Options for VM.
2025-06-30 10:41:40 (491723): Setting Boot Options for VM.
2025-06-30 10:41:40 (491723): Setting Network Configuration for NAT.
2025-06-30 10:41:40 (491723): Enabling VM Network Access.
2025-06-30 10:41:41 (491723): Disabling USB Support for VM.
2025-06-30 10:41:41 (491723): Disabling COM Port Support for VM.
2025-06-30 10:41:41 (491723): Disabling LPT Port Support for VM.
2025-06-30 10:41:42 (491723): Disabling Audio Support for VM.
2025-06-30 10:41:42 (491723): Disabling Clipboard Support for VM.
2025-06-30 10:41:42 (491723): Disabling Drag and Drop Support for VM.
2025-06-30 10:41:43 (491723): Adding storage controller(s) to VM.
2025-06-30 10:41:43 (491723): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-30 10:41:44 (491723): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-30 10:41:44 (491723): forwarding host port 33647 to guest port 80
2025-06-30 10:41:44 (491723): Enabling remote desktop for VM.
2025-06-30 10:41:45 (491723): Enabling shared directory for VM.
2025-06-30 10:41:46 (491723): Starting VM using VBoxManage interface. (boinc_11de1814486999fd, slot#17)
2025-06-30 10:41:47 (491723): Successfully started VM. (PID = '492245')
2025-06-30 10:41:47 (491723): Reporting VM Process ID to BOINC.
2025-06-30 10:41:47 (491723): Guest Log: BIOS: VirtualBox 7.0.20
2025-06-30 10:41:47 (491723): Guest Log: CPUID EDX: 0x178bfbff
2025-06-30 10:41:47 (491723): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-30 10:41:47 (491723): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-30 10:41:47 (491723): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-30 10:41:47 (491723): Detected: Web Application Enabled (http://localhost:33647)
2025-06-30 10:41:47 (491723): Detected: Remote Desktop Enabled (localhost:36399)
2025-06-30 10:41:47 (491723): Preference change detected
2025-06-30 10:41:47 (491723): Setting CPU throttle for VM. (100%)
2025-06-30 10:41:47 (491723): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-30 10:41:49 (491723): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-30 10:41:49 (491723): Guest Log: BIOS: Booting from Hard Disk...
2025-06-30 10:41:52 (491723): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-30 10:41:52 (491723): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-30 10:41:52 (491723): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-30 10:41:57 (491723): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-30 10:41:57 (491723): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-30 10:42:10 (491723): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000191 main     Log opened 2025-06-30T08:42:08.053310000Z
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000327 main     OS Product: Linux
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000357 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000376 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000402 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000403 main     Process ID: 1252
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.000403 main     Package type: LINUX_64BITS_GENERIC
2025-06-30 10:42:10 (491723): Guest Log: 00:00:00.002077 main     5.2.32 r132073 started. Verbose level = 0
2025-06-30 10:42:10 (491723): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-30 10:42:10 (491723): Guest Log: [INFO] Mounting shared directory
2025-06-30 10:42:10 (491723): Guest Log: [INFO] Checking for init_data.xml
2025-06-30 10:42:18 (491723): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-30 10:42:18 (491723): Guest Log: [INFO] Detected branch: prod
2025-06-30 10:42:18 (491723): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-30 10:42:18 (491723): Guest Log: Copying input files
2025-06-30 10:42:20 (491723): Guest Log: Copied input files into RunAtlas.
2025-06-30 10:42:20 (491723): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-06-30 10:42:27 (491723): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-30 10:42:28 (491723): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-30 10:42:28 (491723): Guest Log: 2.6.3.0 1525 0 31544 147750 4 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-06-30 10:42:28 (491723): Guest Log: copied the webapp to /var/www
2025-06-30 10:42:28 (491723): Guest Log: core_number=1
2025-06-30 10:42:29 (491723): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-30 10:42:29 (491723): Guest Log:  *** Starting ATLAS job. (PandaID=6713795257 taskID=45399725) ***
2025-06-30 12:20:48 (491723): Status Report: Elapsed Time: '6000.000000'
2025-06-30 12:20:48 (491723): Status Report: CPU Time: '5907.080000'
2025-06-30 13:59:48 (491723): Status Report: Elapsed Time: '12000.000000'
2025-06-30 13:59:48 (491723): Status Report: CPU Time: '11852.670000'
2025-06-30 15:38:48 (491723): Status Report: Elapsed Time: '18000.000000'
2025-06-30 15:38:48 (491723): Status Report: CPU Time: '17798.970000'
2025-06-30 17:17:49 (491723): Status Report: Elapsed Time: '24000.000000'
2025-06-30 17:17:49 (491723): Status Report: CPU Time: '23745.760000'
2025-06-30 18:56:49 (491723): Status Report: Elapsed Time: '30000.000000'
2025-06-30 18:56:49 (491723): Status Report: CPU Time: '29691.090000'
2025-06-30 20:35:49 (491723): Status Report: Elapsed Time: '36000.000000'
2025-06-30 20:35:49 (491723): Status Report: CPU Time: '35637.200000'
2025-06-30 22:14:50 (491723): Status Report: Elapsed Time: '42000.000000'
2025-06-30 22:14:50 (491723): Status Report: CPU Time: '41583.250000'
2025-06-30 23:53:50 (491723): Status Report: Elapsed Time: '48000.000000'
2025-06-30 23:53:50 (491723): Status Report: CPU Time: '47528.070000'
2025-07-01 01:32:50 (491723): Status Report: Elapsed Time: '54000.000000'
2025-07-01 01:32:50 (491723): Status Report: CPU Time: '53475.880000'
2025-07-01 03:11:51 (491723): Status Report: Elapsed Time: '60000.000000'
2025-07-01 03:11:51 (491723): Status Report: CPU Time: '59419.270000'
2025-07-01 04:49:48 (491723): Guest Log:  *** Job finished ***
2025-07-01 04:49:48 (491723): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:29,638 | INFO     | all workflow threads have been joined
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:29,638 | INFO     | end of generic workflow (traces error code: 0)
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:29,639 | INFO     | traces error code: 0
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:29,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,687 | INFO     | PID=5773 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,687 | INFO     | found 0 job(s) in 20 queues
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,688 | INFO     | [monitor] control thread has ended
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,826 [wrapper] ==== pilot stdout END ====
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,832 [wrapper] ==== wrapper stdout RESUME ====
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,837 [wrapper] pilotpid: 5773
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,842 [wrapper] Pilot exit status: 0
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,890 [wrapper] pandaids: 6713795257
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,921 [wrapper] cleanup supervisor_pilot 29493 5774
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,926 [wrapper] Test setup, not cleaning
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,931 [wrapper] apfmon messages muted
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,936 [wrapper] ==== wrapper stdout END ====
2025-07-01 04:49:48 (491723): Guest Log: 2025-07-01 02:49:47,941 [wrapper] ==== wrapper stderr END ====
2025-07-01 04:49:48 (491723): Guest Log:  *** Error codes and diagnostics ***
2025-07-01 04:49:48 (491723): Guest Log:     "exeErrorCode": 0,
2025-07-01 04:49:48 (491723): Guest Log:     "exeErrorDiag": "",
2025-07-01 04:49:48 (491723): Guest Log:     "pilotErrorCode": 0,
2025-07-01 04:49:48 (491723): Guest Log:     "pilotErrorDiag": "",
2025-07-01 04:49:48 (491723): Guest Log:  *** Listing of results directory ***
2025-07-01 04:49:48 (491723): Guest Log: total 246024
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 30 08:33 pilot3.tar.gz
2025-07-01 04:49:48 (491723): Guest Log: -rwx------. 1 atlas atlas     36292 Jun 30 08:41 runpilot2-wrapper.sh
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 30 08:41 queuedata.json
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas      9754 Jun 30 08:42 init_data.xml
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas    542895 Jun 30 08:42 input.tar.gz
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jun 30 08:42 start_atlas.sh
2025-07-01 04:49:48 (491723): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 30 08:42 EVNT.45399723._000002.pool.root.1 -> /data/./ATLAS.root_0
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas      2628 Jun 30 08:42 pandaJob.out
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas    970700 Jun 30 08:42 agis_schedconf.cvmfs.json
2025-07-01 04:49:48 (491723): Guest Log: drwx------. 4 atlas atlas      4096 Jun 30 08:42 pilot3
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas 235461848 Jul  1 02:48 HITS.45399725._000038.pool.root.1
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas      1027 Jul  1 02:48 memory_monitor_summary.json
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas        95 Jul  1 02:49 pilot_heartbeat.json
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas   1574086 Jul  1 02:49 agis_ddmendpoints.agis.ALL.json
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas    729398 Jul  1 02:49 log.45399725._000038.job.log.tgz.1
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas      7807 Jul  1 02:49 heartbeat.json
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas       744 Jul  1 02:49 pilotlog.txt
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas   5611706 Jul  1 02:49 log.45399725._000038.job.log.1
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas       357 Jul  1 02:49 output.list
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul  1 02:49 runtime_log
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas   6359040 Jul  1 02:49 result.tar.gz
2025-07-01 04:49:48 (491723): Guest Log: -rw-r--r--. 1 atlas atlas      8473 Jul  1 02:49 runtime_log.err
2025-07-01 04:49:48 (491723): Guest Log: -rw-------. 1 atlas atlas       657 Jul  1 02:49 HNYMDmcFPq7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlw4KDmelvaXn.diag
2025-07-01 04:49:48 (491723): Guest Log: Looking for outputfile HITS.45399725._000038.pool.root.1
2025-07-01 04:49:49 (491723): Guest Log: HITS file was successfully produced
2025-07-01 04:49:49 (491723): Guest Log: -rw-------. 1 atlas atlas 235461848 Jul  1 02:48 /home/atlas/RunAtlas/HITS.45399725._000038.pool.root.1
2025-07-01 04:49:49 (491723): Guest Log: Successfully finished the ATLAS job!
2025-07-01 04:49:49 (491723): Guest Log: Copying the results back to the shared directory!
2025-07-01 04:49:49 (491723): Guest Log:  *** Contents of shared directory: ***
2025-07-01 04:49:49 (491723): Guest Log: total 290720
2025-07-01 04:49:49 (491723): Guest Log: -rw-r--r--. 1 root root 290756963 Jun 30 08:41 ATLAS.root_0
2025-07-01 04:49:49 (491723): Guest Log: -rw-r--r--. 1 root root      9754 Jun 30 08:41 init_data.xml
2025-07-01 04:49:49 (491723): Guest Log: -rw-r--r--. 1 root root    542895 Jun 30 08:41 input.tar.gz
2025-07-01 04:49:49 (491723): Guest Log: -rw-r--r--. 1 root root   6359040 Jul  1 02:49 result.tar.gz
2025-07-01 04:49:49 (491723): Guest Log: -rw-r--r--. 1 root root     15095 Jun 30 08:41 start_atlas.sh
2025-07-01 04:49:49 (491723): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-01 04:49:49 (491723): VM Completion File Detected.
2025-07-01 04:49:49 (491723): Powering off VM.
2025-07-01 04:49:50 (491723): Successfully stopped VM.
2025-07-01 04:49:50 (491723): Deregistering VM. (boinc_11de1814486999fd, slot#17)
2025-07-01 04:49:50 (491723): Removing network bandwidth throttle group from VM.
2025-07-01 04:49:50 (491723): Removing VM from VirtualBox.
04:49:56 (491723): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN