Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:33:20 (886309): wrapper (7.7.26015): starting
10:33:20 (886309): wrapper: running run_atlas (--nthreads 3)
[2025-06-30 10:33:20] Arguments: --nthreads 3
[2025-06-30 10:33:20] Threads: 3
[2025-06-30 10:33:20] Checking for CVMFS
[2025-06-30 10:33:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-30 10:33:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-30 10:33:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-30 10:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-30 10:33:21] 2.9.2.0 886505 0 29660 147749 4 1 33205039 36864000 0 130560 0 0 0.000 1291 28688 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-30 10:33:21] CVMFS is ok
[2025-06-30 10:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-30 10:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-30 10:33:21] Further information can be found at the LHC@home message board.
[2025-06-30 10:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-30 10:33:21] Checking for apptainer binary...
[2025-06-30 10:33:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-30 10:33:21] Running /usr/bin/apptainer --version
[2025-06-30 10:33:21] apptainer version 1.4.1-1.1
[2025-06-30 10:33:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-30 10:33:21] thA335a
[2025-06-30 10:33:21] apptainer works
[2025-06-30 10:33:21] Set ATHENA_PROC_NUMBER=3
[2025-06-30 10:33:21] Set ATHENA_CORE_NUMBER=3
[2025-06-30 10:33:21] Starting ATLAS job with PandaID=6713793513
[2025-06-30 10:33:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-30 10:36:25]  *** The last 200 lines of the pilot log: ***
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | could have reported an average CPU frequency of 3793 MHz (4 samples)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . Timing measurements:
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . get job = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . initial setup = 1 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload setup = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-in = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload execution = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-out = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . log creation = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6713793513/pilotlog.txt
[2025-06-30 10:36:25] 2025-06-30 08:35:53,328 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-30 10:36:25] - Log from pilotlog.txt -
[2025-06-30 10:36:25] 2025-06-30 08:35:53,316 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-30 10:36:25] 2025-06-30 08:35:53,317 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3747.6463333333336
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6713793513/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | memory information not available: 'Max'
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | WARNING  | found no stored workdir sizes
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | could have reported an average CPU frequency of 3793 MHz (4 samples)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . Timing measurements:
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . get job = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . initial setup = 1 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload setup = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-in = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload execution = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-out = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . log creation = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6713793513/pilotlog.txt
[2025-06-30 10:36:25] 2025-06-30 08:35:53,328 | WARNING  | 
[2025-06-30 10:36:25] [begin log extracts]
[2025-06-30 10:36:25] - Log from pilotlog.txt -
[2025-06-30 10:36:25] 2025-06-30 08:35:53,316 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-30 10:36:25] 2025-06-30 08:35:53,317 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3747.6463333333336
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6713793513/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | memory information not available: 'Max'
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | WARNING  | found no stored workdir sizes
[2025-06-30 10:36:25] 2025-06-30 08:35:53,318 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | could have reported an average CPU frequency of 3793 MHz (4 samples)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . Timing measurements:
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . get job = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . initial setup = 1 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload setup = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-in = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . payload execution = 2 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . stage-out = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | . log creation = 0 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | ..............................
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 10:36:25] 2025-06-30 08:35:53,319 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6713793513/pilotlog.txt
[2025-06-30 10:36:25] [end log extracts]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,328 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,329 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | job summary report
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | --------------------------------------------------
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | PanDA job id: 6713793513
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | task id: 45368835
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-06-30 10:36:25] 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | pilot error code: 1187
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | pilot error diag: metadata does not exist: /local/data/boinc/slots/0/PanDA_Pilot-6713793513/metadata.xml
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | pilot state: failed 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | transexitcode: 127
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | exeerrorcode: 0
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | exeerrordiag: 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | exitcode: 0
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | exitmsg: 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | cpuconsumptiontime: 7 s
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | nevents: 0
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | neventsw: 0
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | pid: 896120
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | pgrp: 896120
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | corecount: 3
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | event service: False
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | sizes: {0: 2367162, 1: 2367162, 3: 2367452, 11: 2367480, 9: 2376128, 12: 2376128, 132: 2376252}
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | --------------------------------------------------
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | 
[2025-06-30 10:36:25] 2025-06-30 08:35:53,370 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-30 10:36:25] 2025-06-30 08:35:53,384 | INFO     | job 6713793513 has completed (purged errors)
[2025-06-30 10:36:25] 2025-06-30 08:35:53,384 | INFO     | overall cleanup function is called
[2025-06-30 10:36:25] 2025-06-30 08:35:54,389 | INFO     | --- collectZombieJob: --- 10, [896120]
[2025-06-30 10:36:25] 2025-06-30 08:35:54,390 | INFO     | zombie collector waiting for pid 896120
[2025-06-30 10:36:25] 2025-06-30 08:35:54,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-30 10:36:25] 2025-06-30 08:35:54,390 | INFO     | collected zombie processes
[2025-06-30 10:36:25] 2025-06-30 08:35:54,390 | INFO     | will attempt to kill all subprocesses of pid=896120
[2025-06-30 10:36:25] 2025-06-30 08:35:54,430 | INFO     | process IDs to be killed: [896120] (in reverse order)
[2025-06-30 10:36:25] 2025-06-30 08:35:54,454 | WARNING  | found no corresponding commands to process id(s)
[2025-06-30 10:36:25] 2025-06-30 08:35:54,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-30 10:36:25] 2025-06-30 08:35:54,456 | INFO     | did not find any defunct processes belonging to 896120
[2025-06-30 10:36:25] 2025-06-30 08:35:54,456 | INFO     | did not find any defunct processes belonging to 896120
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | ready for new job
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | ***************************************
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | ***************************************
[2025-06-30 10:36:25] 2025-06-30 08:35:54,457 | INFO     | 
[2025-06-30 10:36:25] 2025-06-30 08:35:54,458 | INFO     | architecture information:
[2025-06-30 10:36:25] 2025-06-30 08:35:54,458 | INFO     | executing command: cat /etc/os-release
[2025-06-30 10:36:25] 2025-06-30 08:35:54,467 | INFO     | cat /etc/os-release:
[2025-06-30 10:36:25] NAME="CentOS Linux"
[2025-06-30 10:36:25] VERSION="7 (Core)"
[2025-06-30 10:36:25] ID="centos"
[2025-06-30 10:36:25] ID_LIKE="rhel fedora"
[2025-06-30 10:36:25] VERSION_ID="7"
[2025-06-30 10:36:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-30 10:36:25] ANSI_COLOR="0;31"
[2025-06-30 10:36:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-30 10:36:25] HOME_URL="https://www.centos.org/"
[2025-06-30 10:36:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-30 10:36:25] 
[2025-06-30 10:36:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-30 10:36:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-30 10:36:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-30 10:36:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-30 10:36:25] 
[2025-06-30 10:36:25] 2025-06-30 08:35:54,467 | INFO     | ***************************************
[2025-06-30 10:36:25] 2025-06-30 08:35:54,970 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | INFO     | sufficient remaining disk space (368714973184 B)
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | INFO     | current server update state: UPDATING_FINAL
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | INFO     | update_server=False
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-30 10:36:25] 2025-06-30 08:35:54,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-30 10:36:25] 2025-06-30 08:35:55,192 | INFO     | all job control threads have been joined
[2025-06-30 10:36:25] 2025-06-30 08:35:55,224 | INFO     | all data control threads have been joined
[2025-06-30 10:36:25] 2025-06-30 08:35:55,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-30 10:36:25] 2025-06-30 08:35:55,912 | INFO     | aborting loop
[2025-06-30 10:36:25] 2025-06-30 08:35:55,958 | INFO     | all payload control threads have been joined
[2025-06-30 10:36:25] 2025-06-30 08:35:55,990 | INFO     | [job] retrieve thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:55,990 | INFO     | [job] queue monitor thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-30 10:36:25] 2025-06-30 08:35:56,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,197 | INFO     | [job] control thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-30 10:36:25] 2025-06-30 08:35:56,230 | INFO     | [data] control thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,364 | INFO     | [payload] failed_post thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,512 | INFO     | [data] copytool_in thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,613 | INFO     | [payload] validate_post thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,918 | INFO     | [job] job monitor thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,964 | INFO     | [payload] control thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:56,974 | INFO     | [job] validate thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:57,046 | INFO     | [job] create_data_payload thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:57,096 | INFO     | [payload] validate_pre thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:57,486 | INFO     | [payload] execute_payloads thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:35:58,044 | INFO     | [data] copytool_out thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:36:00,231 | INFO     | [data] queue_monitor thread has finished
[2025-06-30 10:36:25] 2025-06-30 08:36:00,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265159837504)>', '<ExcThread(monitor, started 140264664442624)>']
[2025-06-30 10:36:25] 2025-06-30 08:36:05,819 | INFO     | all workflow threads have been joined
[2025-06-30 10:36:25] 2025-06-30 08:36:05,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-30 10:36:25] 2025-06-30 08:36:05,820 | INFO     | traces error code: 0
[2025-06-30 10:36:25] 2025-06-30 08:36:05,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | INFO     | PID=890490 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | INFO     | found 0 job(s) in 20 queues
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-30 10:36:25] 2025-06-30 08:36:25,609 | INFO     | [monitor] control thread has ended
[2025-06-30 10:36:25] 2025-06-30 08:36:25,653 [wrapper] ==== pilot stdout END ====
[2025-06-30 10:36:25] 2025-06-30 08:36:25,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-30 10:36:25] 2025-06-30 08:36:25,658 [wrapper] pilotpid: 890490
[2025-06-30 10:36:25] 2025-06-30 08:36:25,660 [wrapper] Pilot exit status: 0
[2025-06-30 10:36:25] 2025-06-30 08:36:25,668 [wrapper] pandaids: 6713793513
[2025-06-30 10:36:25] 2025-06-30 08:36:25,684 [wrapper] cleanup supervisor_pilot  890496 890491
[2025-06-30 10:36:25] 2025-06-30 08:36:25,687 [wrapper] Test setup, not cleaning
[2025-06-30 10:36:25] 2025-06-30 08:36:25,689 [wrapper] apfmon messages muted
[2025-06-30 10:36:25] 2025-06-30 08:36:25,692 [wrapper] ==== wrapper stdout END ====
[2025-06-30 10:36:25] 2025-06-30 08:36:25,694 [wrapper] ==== wrapper stderr END ====
[2025-06-30 10:36:25]  *** Error codes and diagnostics ***
[2025-06-30 10:36:25]     "exeErrorCode": 0,
[2025-06-30 10:36:25]     "exeErrorDiag": "",
[2025-06-30 10:36:25]     "pilotErrorCode": 1305,
[2025-06-30 10:36:25]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-06-30 10:36:25]  *** Listing of results directory ***
[2025-06-30 10:36:25] total 335636
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc    530466 Jun 30 10:19 pilot3.tar.gz
[2025-06-30 10:36:25] -rwx------ 1 boinc boinc     36292 Jun 30 10:32 runpilot2-wrapper.sh
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc      5112 Jun 30 10:32 queuedata.json
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc       100 Jun 30 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-30 10:36:25] -rwxr-xr-x 1 boinc boinc      7986 Jun 30 10:33 run_atlas
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc       105 Jun 30 10:33 job.xml
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc 339696675 Jun 30 10:33 EVNT.45368833._000018.pool.root.1
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc    543074 Jun 30 10:33 input.tar.gz
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc     15095 Jun 30 10:33 start_atlas.sh
[2025-06-30 10:36:25] drwxrwx--x 2 boinc boinc      4096 Jun 30 10:33 shared
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc         0 Jun 30 10:33 boinc_setup_complete
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc      6525 Jun 30 10:33 init_data.xml
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc         0 Jun 30 10:33 boinc_lockfile
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc      2909 Jun 30 10:33 pandaJob.out
[2025-06-30 10:36:25] -rw------- 1 boinc boinc    970700 Jun 30 10:33 agis_schedconf.cvmfs.json
[2025-06-30 10:36:25] -rw------- 1 boinc boinc   1574086 Jun 30 10:33 agis_ddmendpoints.agis.ALL.json
[2025-06-30 10:36:25] drwx------ 4 boinc boinc      4096 Jun 30 10:33 pilot3
[2025-06-30 10:36:25] -rw------- 1 boinc boinc       277 Jun 30 10:33 memory_monitor_summary.json
[2025-06-30 10:36:25] -rw------- 1 boinc boinc      7984 Jun 30 10:33 log.45368835._001026.job.log.tgz.1
[2025-06-30 10:36:25] -rw------- 1 boinc boinc        95 Jun 30 10:35 pilot_heartbeat.json
[2025-06-30 10:36:25] -rw------- 1 boinc boinc      2227 Jun 30 10:35 heartbeat.json
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc        22 Jun 30 10:35 wrapper_checkpoint.txt
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc      8192 Jun 30 10:35 boinc_mmap_file
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc       522 Jun 30 10:35 boinc_task_state.xml
[2025-06-30 10:36:25] -rw------- 1 boinc boinc       746 Jun 30 10:36 pilotlog.txt
[2025-06-30 10:36:25] -rw------- 1 boinc boinc     73990 Jun 30 10:36 log.45368835._001026.job.log.1
[2025-06-30 10:36:25] -rw------- 1 boinc boinc       186 Jun 30 10:36 output.list
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc       620 Jun 30 10:36 runtime_log
[2025-06-30 10:36:25] -rw------- 1 boinc boinc     92160 Jun 30 10:36 result.tar.gz
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc      8586 Jun 30 10:36 runtime_log.err
[2025-06-30 10:36:25] -rw------- 1 boinc boinc       647 Jun 30 10:36 kR4LDme7Oq7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZv4KDmWERjZn.diag
[2025-06-30 10:36:25] -rw-r--r-- 1 boinc boinc     21416 Jun 30 10:36 stderr.txt
[2025-06-30 10:36:25] No HITS result produced
[2025-06-30 10:36:25]  *** Contents of shared directory: ***
[2025-06-30 10:36:25] total 332380
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc 339696675 Jun 30 10:33 ATLAS.root_0
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc    543074 Jun 30 10:33 input.tar.gz
[2025-06-30 10:36:25] -rw-r--r-- 2 boinc boinc     15095 Jun 30 10:33 start_atlas.sh
[2025-06-30 10:36:25] -rw------- 1 boinc boinc     92160 Jun 30 10:36 result.tar.gz
10:36:26 (886309): run_atlas exited; CPU time 7.971688
10:36:26 (886309): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN