Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:05:40 (1123628): wrapper (7.7.26015): starting
03:05:40 (1123628): wrapper: running run_atlas (--nthreads 4)
[2025-06-30 03:05:40] Arguments: --nthreads 4
[2025-06-30 03:05:40] Threads: 4
[2025-06-30 03:05:40] Checking for CVMFS
[2025-06-30 03:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-30 03:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-30 03:05:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-30 03:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-30 03:05:41] 2.13.0.0 372656 909 53296 147724 2 63 3096172 4096001 793 130560 0 1668662 99.728 354542 110 http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-06-30 03:05:41] CVMFS is ok
[2025-06-30 03:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-30 03:05:41] Checking for apptainer binary...
[2025-06-30 03:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-30 03:05:41] Running /usr/bin/apptainer --version
[2025-06-30 03:05:41] apptainer version 1.4.0
[2025-06-30 03:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-30 03:05:41] Zen
[2025-06-30 03:05:41] apptainer works
[2025-06-30 03:05:41] Set ATHENA_PROC_NUMBER=4
[2025-06-30 03:05:41] Set ATHENA_CORE_NUMBER=4
[2025-06-30 03:05:41] Starting ATLAS job with PandaID=6713199895
[2025-06-30 03:05:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-30 03:08:36]  *** The last 200 lines of the pilot log: ***
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | could have reported an average CPU frequency of 4414 MHz (4 samples)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . Timing measurements:
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . get job = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . initial setup = 6 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload setup = 2 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-in = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload execution = 3 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-out = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . log creation = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | executing command: tail -n 20 /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/pilotlog.txt
[2025-06-30 03:08:36] 2025-06-29 17:08:24,052 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-30 03:08:36] - Log from pilotlog.txt -
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | using path: /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | extracted standard info from prmon json
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | extracted standard memory fields from prmon json
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | WARNING  | found no stored workdir sizes
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | WARNING  | wrong length of table data, x=[1751216778.0], y=[0.0] (must be same and length>=4)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | could have reported an average CPU frequency of 4414 MHz (4 samples)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . Timing measurements:
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . get job = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . initial setup = 6 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload setup = 2 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-in = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload execution = 3 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-out = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . log creation = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | executing command: tail -n 20 /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/pilotlog.txt
[2025-06-30 03:08:36] 2025-06-29 17:08:24,052 | WARNING  | 
[2025-06-30 03:08:36] [begin log extracts]
[2025-06-30 03:08:36] - Log from pilotlog.txt -
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | using path: /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/memory_monitor_summary.json (trf name=prmon)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | extracted standard info from prmon json
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | INFO     | extracted standard memory fields from prmon json
[2025-06-30 03:08:36] 2025-06-29 17:08:24,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | WARNING  | found no stored workdir sizes
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | WARNING  | wrong length of table data, x=[1751216778.0], y=[0.0] (must be same and length>=4)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | could have reported an average CPU frequency of 4414 MHz (4 samples)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . Timing measurements:
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . get job = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . initial setup = 6 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload setup = 2 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-in = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . payload execution = 3 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . stage-out = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | . log creation = 0 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | ..............................
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 03:08:36] 2025-06-29 17:08:24,043 | INFO     | executing command: tail -n 20 /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/pilotlog.txt
[2025-06-30 03:08:36] [end log extracts]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,052 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,053 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,099 | INFO     | 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,099 | INFO     | job summary report
[2025-06-30 03:08:36] 2025-06-29 17:08:24,099 | INFO     | --------------------------------------------------
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | PanDA job id: 6713199895
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | task id: 45368821
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-06-30 03:08:36] 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | pilot error code: 1187
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | pilot error diag: metadata does not exist: /home/michael/Boinc/BOINC/slots/7/PanDA_Pilot-6713199895/metadata.xml
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | pilot state: failed 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | transexitcode: 127
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | exeerrorcode: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | exeerrordiag: 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | exitcode: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | exitmsg: 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | cpuconsumptiontime: 7 s
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | nevents: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | neventsw: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | pid: 1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | pgrp: 1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | corecount: 4
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | event service: False
[2025-06-30 03:08:36] 2025-06-29 17:08:24,100 | INFO     | sizes: {0: 2367248, 2: 2367510, 10: 2376211, 9: 2371907, 11: 2376211, 131: 2376207}
[2025-06-30 03:08:36] 2025-06-29 17:08:24,101 | INFO     | --------------------------------------------------
[2025-06-30 03:08:36] 2025-06-29 17:08:24,101 | INFO     | 
[2025-06-30 03:08:36] 2025-06-29 17:08:24,101 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/7
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | job 6713199895 has completed (purged errors)
[2025-06-30 03:08:36] 2025-06-29 17:08:24,117 | INFO     | overall cleanup function is called
[2025-06-30 03:08:36] 2025-06-29 17:08:25,122 | INFO     | --- collectZombieJob: --- 10, [1133285]
[2025-06-30 03:08:36] 2025-06-29 17:08:25,123 | INFO     | zombie collector waiting for pid 1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:25,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-30 03:08:36] 2025-06-29 17:08:25,123 | INFO     | collected zombie processes
[2025-06-30 03:08:36] 2025-06-29 17:08:25,123 | INFO     | will attempt to kill all subprocesses of pid=1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:25,213 | INFO     | process IDs to be killed: [1133285] (in reverse order)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,255 | WARNING  | found no corresponding commands to process id(s)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-30 03:08:36] 2025-06-29 17:08:25,259 | INFO     | did not find any defunct processes belonging to 1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:25,262 | INFO     | did not find any defunct processes belonging to 1133285
[2025-06-30 03:08:36] 2025-06-29 17:08:25,262 | INFO     | ready for new job
[2025-06-30 03:08:36] 2025-06-29 17:08:25,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-30 03:08:36] 2025-06-29 17:08:25,263 | INFO     | ***************************************
[2025-06-30 03:08:36] 2025-06-29 17:08:25,263 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-30 03:08:36] 2025-06-29 17:08:25,263 | INFO     | ***************************************
[2025-06-30 03:08:36] 2025-06-29 17:08:25,263 | INFO     | 
[2025-06-30 03:08:36] 2025-06-29 17:08:25,264 | INFO     | architecture information:
[2025-06-30 03:08:36] 2025-06-29 17:08:25,264 | INFO     | executing command: cat /etc/os-release
[2025-06-30 03:08:36] 2025-06-29 17:08:25,278 | INFO     | cat /etc/os-release:
[2025-06-30 03:08:36] NAME="CentOS Linux"
[2025-06-30 03:08:36] VERSION="7 (Core)"
[2025-06-30 03:08:36] ID="centos"
[2025-06-30 03:08:36] ID_LIKE="rhel fedora"
[2025-06-30 03:08:36] VERSION_ID="7"
[2025-06-30 03:08:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-30 03:08:36] ANSI_COLOR="0;31"
[2025-06-30 03:08:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-30 03:08:36] HOME_URL="https://www.centos.org/"
[2025-06-30 03:08:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-30 03:08:36] 
[2025-06-30 03:08:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-30 03:08:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-30 03:08:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-30 03:08:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-30 03:08:36] 
[2025-06-30 03:08:36] 2025-06-29 17:08:25,278 | INFO     | ***************************************
[2025-06-30 03:08:36] 2025-06-29 17:08:25,781 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/7
[2025-06-30 03:08:36] 2025-06-29 17:08:25,791 | INFO     | sufficient remaining disk space (362565074944 B)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | INFO     | current server update state: UPDATING_FINAL
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | INFO     | update_server=False
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | INFO     | found 0 job(s) in 20 queues
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-30 03:08:36] 2025-06-29 17:08:25,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-30 03:08:36] 2025-06-29 17:08:25,825 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-30 03:08:36] 2025-06-29 17:08:25,825 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-30 03:08:36] 2025-06-29 17:08:25,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-30 03:08:36] 2025-06-29 17:08:25,826 | INFO     | will abort loop
[2025-06-30 03:08:36] 2025-06-29 17:08:25,848 | INFO     | all data control threads have been joined
[2025-06-30 03:08:36] 2025-06-29 17:08:26,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-30 03:08:36] 2025-06-29 17:08:26,524 | INFO     | all payload control threads have been joined
[2025-06-30 03:08:36] 2025-06-29 17:08:26,797 | INFO     | [job] retrieve thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:26,797 | INFO     | [job] queue monitor thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:26,831 | INFO     | [job] job monitor thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:26,854 | INFO     | [data] control thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-30 03:08:36] 2025-06-29 17:08:27,177 | INFO     | [payload] execute_payloads thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,341 | INFO     | [data] copytool_in thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,463 | INFO     | all job control threads have been joined
[2025-06-30 03:08:36] 2025-06-29 17:08:27,485 | INFO     | [payload] validate_post thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,530 | INFO     | [payload] control thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,843 | INFO     | [job] validate thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:27,970 | INFO     | [job] create_data_payload thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:28,000 | INFO     | [payload] failed_post thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:28,030 | INFO     | [payload] validate_pre thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:28,271 | INFO     | [data] copytool_out thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:28,468 | INFO     | [job] control thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:31,116 | INFO     | [data] queue_monitor thread has finished
[2025-06-30 03:08:36] 2025-06-29 17:08:31,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134712456525632)>', '<ExcThread(monitor, started 134711959602944)>']
[2025-06-30 03:08:36] 2025-06-29 17:08:31,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-30 03:08:36] 2025-06-29 17:08:31,823 | INFO     | [monitor] control thread has ended
[2025-06-30 03:08:36] 2025-06-29 17:08:36,709 | INFO     | all workflow threads have been joined
[2025-06-30 03:08:36] 2025-06-29 17:08:36,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-30 03:08:36] 2025-06-29 17:08:36,710 | INFO     | traces error code: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:36,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-30 03:08:36] 2025-06-29 17:08:36,762 [wrapper] ==== pilot stdout END ====
[2025-06-30 03:08:36] 2025-06-29 17:08:36,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-30 03:08:36] 2025-06-29 17:08:36,766 [wrapper] pilotpid: 1127537
[2025-06-30 03:08:36] 2025-06-29 17:08:36,767 [wrapper] Pilot exit status: 0
[2025-06-30 03:08:36] 2025-06-29 17:08:36,775 [wrapper] pandaids: 6713199895
[2025-06-30 03:08:36] 2025-06-29 17:08:36,803 [wrapper] cleanup supervisor_pilot 1127543 1127538
[2025-06-30 03:08:36] 2025-06-29 17:08:36,804 [wrapper] Test setup, not cleaning
[2025-06-30 03:08:36] 2025-06-29 17:08:36,806 [wrapper] apfmon messages muted
[2025-06-30 03:08:36] 2025-06-29 17:08:36,808 [wrapper] ==== wrapper stdout END ====
[2025-06-30 03:08:36] 2025-06-29 17:08:36,809 [wrapper] ==== wrapper stderr END ====
[2025-06-30 03:08:36]  *** Error codes and diagnostics ***
[2025-06-30 03:08:36]     "exeErrorCode": 0,
[2025-06-30 03:08:36]     "exeErrorDiag": "",
[2025-06-30 03:08:36]     "pilotErrorCode": 1305,
[2025-06-30 03:08:36]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-06-30 03:08:36]  *** Listing of results directory ***
[2025-06-30 03:08:36] total 326896
[2025-06-30 03:08:36] -rw-r--r-- 1 michael michael    530466 Jun 30 02:12 pilot3.tar.gz
[2025-06-30 03:08:36] -rw-r--r-- 1 michael michael      5112 Jun 30 02:17 queuedata.json
[2025-06-30 03:08:36] -rwx------ 1 michael michael     36245 Jun 30 02:17 runpilot2-wrapper.sh
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael       100 Jun 30 03:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-30 03:08:36] -rwxr-xr-x 1 michael michael      7986 Jun 30 03:05 run_atlas
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael       105 Jun 30 03:05 job.xml
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael     15095 Jun 30 03:05 start_atlas.sh
[2025-06-30 03:08:36] drwxrwx--x 2 michael michael      4096 Jun 30 03:05 shared
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael    543071 Jun 30 03:05 input.tar.gz
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael      9731 Jun 30 03:05 init_data.xml
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael 330733580 Jun 30 03:05 EVNT.45368816._000016.pool.root.1
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael         0 Jun 30 03:05 boinc_lockfile
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael      2909 Jun 30 03:05 pandaJob.out
[2025-06-30 03:08:36] -rw------- 1 michael michael    970665 Jun 30 03:05 agis_schedconf.cvmfs.json
[2025-06-30 03:08:36] -rw------- 1 michael michael   1574086 Jun 30 03:05 agis_ddmendpoints.agis.ALL.json
[2025-06-30 03:08:36] drwx------ 4 michael michael      4096 Jun 30 03:05 pilot3
[2025-06-30 03:08:36] -rw------- 1 michael michael       903 Jun 30 03:06 memory_monitor_summary.json
[2025-06-30 03:08:36] -rw------- 1 michael michael      8175 Jun 30 03:06 log.45368821._000882.job.log.tgz.1
[2025-06-30 03:08:36] -rw------- 1 michael michael        95 Jun 30 03:07 pilot_heartbeat.json
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael      8192 Jun 30 03:08 boinc_mmap_file
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael        22 Jun 30 03:08 wrapper_checkpoint.txt
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael       522 Jun 30 03:08 boinc_task_state.xml
[2025-06-30 03:08:36] -rw------- 1 michael michael      2558 Jun 30 03:08 heartbeat.json
[2025-06-30 03:08:36] -rw------- 1 michael michael      4678 Jun 30 03:08 pilotlog.txt
[2025-06-30 03:08:36] -rw------- 1 michael michael     76267 Jun 30 03:08 log.45368821._000882.job.log.1
[2025-06-30 03:08:36] -rw------- 1 michael michael       186 Jun 30 03:08 output.list
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael       620 Jun 30 03:08 runtime_log
[2025-06-30 03:08:36] -rw------- 1 michael michael    102400 Jun 30 03:08 result.tar.gz
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael      8601 Jun 30 03:08 runtime_log.err
[2025-06-30 03:08:36] -rw------- 1 michael michael       626 Jun 30 03:08 DZhLDm7t9p7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6Z4KDmajzFGo.diag
[2025-06-30 03:08:36] -rw-rw-r-- 1 michael michael     21100 Jun 30 03:08 stderr.txt
[2025-06-30 03:08:36] No HITS result produced
[2025-06-30 03:08:36]  *** Contents of shared directory: ***
[2025-06-30 03:08:36] total 323632
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael     15095 Jun 30 03:05 start_atlas.sh
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael    543071 Jun 30 03:05 input.tar.gz
[2025-06-30 03:08:36] -rw-r--r-- 2 michael michael 330733580 Jun 30 03:05 ATLAS.root_0
[2025-06-30 03:08:36] -rw------- 1 michael michael    102400 Jun 30 03:08 result.tar.gz
03:08:37 (1123628): run_atlas exited; CPU time 9.525435
03:08:37 (1123628): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN