Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:01 (19540): wrapper (7.7.26015): starting
18:29:01 (19540): wrapper: running run_atlas (--nthreads 8)
[2025-06-29 18:29:01] Arguments: --nthreads 8
[2025-06-29 18:29:01] Threads: 8
[2025-06-29 18:29:01] Checking for CVMFS
[2025-06-29 18:29:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 18:29:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 18:29:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 18:29:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 18:29:02] 2.11.2.0 26607 69544 100388 147724 2 62 20003330 25165825 364 130560 0 36495374 99.842 39480903 3655 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-29 18:29:02] CVMFS is ok
[2025-06-29 18:29:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 18:29:02] Checking for apptainer binary...
[2025-06-29 18:29:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-29 18:29:02] Running /usr/bin/apptainer --version
[2025-06-29 18:29:02] apptainer version 1.3.2-1.el7
[2025-06-29 18:29:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 18:29:03] cg-vwn479.simple-grid.lan
[2025-06-29 18:29:03] apptainer works
[2025-06-29 18:29:03] Set ATHENA_PROC_NUMBER=8
[2025-06-29 18:29:03] Set ATHENA_CORE_NUMBER=8
[2025-06-29 18:29:03] Starting ATLAS job with PandaID=6703335944
[2025-06-29 18:29:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 20:17:39]  *** The last 200 lines of the pilot log: ***
[2025-06-29 20:17:39] 2025-06-29 18:17:04,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 20:17:39] 2025-06-29 18:17:06,772 | INFO     | monitor loop #448: job 0:6703335944 is in state 'finished'
[2025-06-29 20:17:39] 2025-06-29 18:17:06,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,870 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-29 20:17:39] 2025-06-29 18:17:07,871 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-06-29 20:17:39] 2025-06-29 18:17:07,872 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6703335944/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,873 | INFO     | extracted standard info from prmon json
[2025-06-29 20:17:39] 2025-06-29 18:17:07,873 | INFO     | extracted standard memory fields from prmon json
[2025-06-29 20:17:39] 2025-06-29 18:17:07,873 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-29 20:17:39] 2025-06-29 18:17:07,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 20:17:39] 2025-06-29 18:17:07,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 20:17:39] 2025-06-29 18:17:07,876 | INFO     | fitting pss+swap vs Time
[2025-06-29 20:17:39] 2025-06-29 18:17:07,876 | INFO     | sum of square deviations: 369281342.5
[2025-06-29 20:17:39] 2025-06-29 18:17:07,877 | INFO     | sum of deviations: -3752078493.5000033
[2025-06-29 20:17:39] 2025-06-29 18:17:07,877 | INFO     | mean x: 1751217781.5
[2025-06-29 20:17:39] 2025-06-29 18:17:07,877 | INFO     | mean y: 2630173.896226415
[2025-06-29 20:17:39] 2025-06-29 18:17:07,877 | INFO     | -- intersect: 17795856690.345367
[2025-06-29 20:17:39] 2025-06-29 18:17:07,877 | INFO     | intersect: 17795856690.345367
[2025-06-29 20:17:39] 2025-06-29 18:17:07,878 | INFO     | chi2: 1.6474859740795649
[2025-06-29 20:17:39] 2025-06-29 18:17:07,878 | INFO     | sum of square deviations: 319447850.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,878 | INFO     | sum of deviations: -2362269529.999999
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | mean x: 1751217629.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | mean y: 2634426.8514851485
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | -- intersect: 12952629380.286114
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | intersect: 12952629380.286114
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | chi2: 1.6507235669974962
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | current chi2=1.6507235669974962 (change=-0.19651717640510818 %)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,879 | INFO     | right removable region: 100
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | sum of square deviations: 319447850.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | sum of deviations: -20685510530.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | mean x: 1751217934.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | mean y: 2680912.168316832
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | -- intersect: 113400961771.0999
[2025-06-29 20:17:39] 2025-06-29 18:17:07,880 | INFO     | intersect: 113400961771.0999
[2025-06-29 20:17:39] 2025-06-29 18:17:07,881 | INFO     | chi2: 0.09069591307027229
[2025-06-29 20:17:39] 2025-06-29 18:17:07,881 | INFO     | current chi2=0.09069591307027229 (change=94.49489012366595 %)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,881 | INFO     | sum of square deviations: 274312120.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,881 | INFO     | sum of deviations: -19658132853.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,881 | INFO     | mean x: 1751218086.5
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | mean y: 2677398.5625
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | -- intersect: 125500879224.2545
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | intersect: 125500879224.2545
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | chi2: 0.0785743898644273
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | current chi2=0.0785743898644273 (change=13.36501590369688 %)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | left removable region: 20
[2025-06-29 20:17:39] 2025-06-29 18:17:07,882 | INFO     | sum of square deviations: 158737860.0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | sum of deviations: -13847049471.000002
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | mean x: 1751218208.5
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | mean y: 2670352.575
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | -- intersect: 152765251173.65637
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | intersect: 152765251173.65637
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | chi2: 0.06600825593229241
[2025-06-29 20:17:39] 2025-06-29 18:17:07,883 | INFO     | -- intersect: 152765251173.65637
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | current memory leak: -87.23 B/s (using 80 data points, chi2=0.07)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | could have reported an average CPU frequency of 2249 MHz (7 samples)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | ..............................
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | . Timing measurements:
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | . get job = 0 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | . initial setup = 1 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,884 | INFO     | . payload setup = 6 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,885 | INFO     | . stage-in = 0 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,885 | INFO     | . payload execution = 6441 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,885 | INFO     | . stage-out = 0 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,885 | INFO     | . log creation = 0 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,885 | INFO     | ..............................
[2025-06-29 20:17:39] 2025-06-29 18:17:07,980 | INFO     | 
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | job summary report
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | --------------------------------------------------
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | PanDA job id: 6703335944
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | task id: 45275512
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | errors: (none)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | pilot state: finished 
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | transexitcode: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | exeerrorcode: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | exeerrordiag: 
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | exitcode: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | exitmsg: OK
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | cpuconsumptiontime: 42412 s
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | nevents: 400
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | neventsw: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | pid: 29686
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | pgrp: 29686
[2025-06-29 20:17:39] 2025-06-29 18:17:07,981 | INFO     | corecount: 8
[2025-06-29 20:17:39] 2025-06-29 18:17:07,982 | INFO     | event service: False
[2025-06-29 20:17:39] 2025-06-29 18:17:07,982 | INFO     | sizes: {0: 2366421, 1: 2366620, 4: 2366882, 11: 2366910, 6452: 2402673, 6453: 2402673, 6460: 2402995}
[2025-06-29 20:17:39] 2025-06-29 18:17:07,982 | INFO     | --------------------------------------------------
[2025-06-29 20:17:39] 2025-06-29 18:17:07,982 | INFO     | 
[2025-06-29 20:17:39] 2025-06-29 18:17:07,982 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-29 20:17:39] 2025-06-29 18:17:07,995 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 20:17:39] 2025-06-29 18:17:07,997 | INFO     | job 6703335944 has completed (purged errors)
[2025-06-29 20:17:39] 2025-06-29 18:17:07,997 | INFO     | overall cleanup function is called
[2025-06-29 20:17:39] 2025-06-29 18:17:09,004 | INFO     | --- collectZombieJob: --- 10, [29686]
[2025-06-29 20:17:39] 2025-06-29 18:17:09,004 | INFO     | zombie collector waiting for pid 29686
[2025-06-29 20:17:39] 2025-06-29 18:17:09,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 20:17:39] 2025-06-29 18:17:09,004 | INFO     | collected zombie processes
[2025-06-29 20:17:39] 2025-06-29 18:17:09,004 | INFO     | will attempt to kill all subprocesses of pid=29686
[2025-06-29 20:17:39] 2025-06-29 18:17:09,042 | INFO     | process IDs to be killed: [29686] (in reverse order)
[2025-06-29 20:17:39] 2025-06-29 18:17:09,073 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 20:17:39] 2025-06-29 18:17:09,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 20:17:39] 2025-06-29 18:17:09,075 | INFO     | did not find any defunct processes belonging to 29686
[2025-06-29 20:17:39] 2025-06-29 18:17:09,077 | INFO     | did not find any defunct processes belonging to 29686
[2025-06-29 20:17:39] 2025-06-29 18:17:09,077 | INFO     | ready for new job
[2025-06-29 20:17:39] 2025-06-29 18:17:09,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 20:17:39] 2025-06-29 18:17:09,078 | INFO     | ***************************************
[2025-06-29 20:17:39] 2025-06-29 18:17:09,079 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 20:17:39] 2025-06-29 18:17:09,079 | INFO     | ***************************************
[2025-06-29 20:17:39] 2025-06-29 18:17:09,079 | INFO     | 
[2025-06-29 20:17:39] 2025-06-29 18:17:09,079 | INFO     | pilot is running in a VM
[2025-06-29 20:17:39] 2025-06-29 18:17:09,079 | INFO     | architecture information:
[2025-06-29 20:17:39] 2025-06-29 18:17:09,080 | INFO     | executing command: cat /etc/os-release
[2025-06-29 20:17:39] 2025-06-29 18:17:09,092 | INFO     | cat /etc/os-release:
[2025-06-29 20:17:39] NAME="CentOS Linux"
[2025-06-29 20:17:39] VERSION="7 (Core)"
[2025-06-29 20:17:39] ID="centos"
[2025-06-29 20:17:39] ID_LIKE="rhel fedora"
[2025-06-29 20:17:39] VERSION_ID="7"
[2025-06-29 20:17:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 20:17:39] ANSI_COLOR="0;31"
[2025-06-29 20:17:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 20:17:39] HOME_URL="https://www.centos.org/"
[2025-06-29 20:17:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 20:17:39] 
[2025-06-29 20:17:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 20:17:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 20:17:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 20:17:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 20:17:39] 
[2025-06-29 20:17:39] 2025-06-29 18:17:09,093 | INFO     | ***************************************
[2025-06-29 20:17:39] 2025-06-29 18:17:09,595 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-29 20:17:39] 2025-06-29 18:17:09,609 | INFO     | sufficient remaining disk space (495222521856 B)
[2025-06-29 20:17:39] 2025-06-29 18:17:09,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 20:17:39] 2025-06-29 18:17:09,610 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 20:17:39] 2025-06-29 18:17:09,610 | INFO     | update_server=False
[2025-06-29 20:17:39] 2025-06-29 18:17:09,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 20:17:39] 2025-06-29 18:17:09,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 20:17:39] 2025-06-29 18:17:09,880 | INFO     | all job control threads have been joined
[2025-06-29 20:17:39] 2025-06-29 18:17:09,880 | INFO     | all payload control threads have been joined
[2025-06-29 20:17:39] 2025-06-29 18:17:10,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 20:17:39] 2025-06-29 18:17:10,281 | INFO     | aborting loop
[2025-06-29 20:17:39] 2025-06-29 18:17:10,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 20:17:39] 2025-06-29 18:17:10,583 | INFO     | all data control threads have been joined
[2025-06-29 20:17:39] 2025-06-29 18:17:10,611 | INFO     | [job] retrieve thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,611 | INFO     | [job] queue monitor thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,856 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,865 | INFO     | [job] validate thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,883 | INFO     | [payload] control thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,886 | INFO     | [job] control thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:10,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:11,034 | INFO     | [data] copytool_in thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:11,287 | INFO     | [job] job monitor thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:11,353 | INFO     | [payload] validate_post thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:11,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 20:17:39] 2025-06-29 18:17:11,588 | INFO     | [data] control thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:11,748 | INFO     | [payload] failed_post thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:12,040 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:12,091 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:12,406 | INFO     | [data] copytool_out thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:15,519 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 20:17:39] 2025-06-29 18:17:16,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695403886400)>', '<ExcThread(monitor, started 139694708860672)>']
[2025-06-29 20:17:39] 2025-06-29 18:17:21,022 | INFO     | all workflow threads have been joined
[2025-06-29 20:17:39] 2025-06-29 18:17:21,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 20:17:39] 2025-06-29 18:17:21,023 | INFO     | traces error code: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:21,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 20:17:39] 2025-06-29 18:17:39,517 | INFO     | PID=23178 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-29 20:17:39] 2025-06-29 18:17:39,517 | INFO     | .. there are 2 such processes running
[2025-06-29 20:17:39] 2025-06-29 18:17:39,518 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 20:17:39] 2025-06-29 18:17:39,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 20:17:39] 2025-06-29 18:17:39,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 20:17:39] 2025-06-29 18:17:39,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 20:17:39] 2025-06-29 18:17:39,519 | INFO     | [monitor] control thread has ended
[2025-06-29 20:17:39] 2025-06-29 18:17:39,615 [wrapper] ==== pilot stdout END ====
[2025-06-29 20:17:39] 2025-06-29 18:17:39,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 20:17:39] 2025-06-29 18:17:39,620 [wrapper] pilotpid: 23178
[2025-06-29 20:17:39] 2025-06-29 18:17:39,623 [wrapper] Pilot exit status: 0
[2025-06-29 20:17:39] 2025-06-29 18:17:39,633 [wrapper] pandaids: 6703335944
[2025-06-29 20:17:39] 2025-06-29 18:17:39,654 [wrapper] cleanup supervisor_pilot 11722 23179
[2025-06-29 20:17:39] 2025-06-29 18:17:39,657 [wrapper] Test setup, not cleaning
[2025-06-29 20:17:39] 2025-06-29 18:17:39,664 [wrapper] apfmon messages muted
[2025-06-29 20:17:39] 2025-06-29 18:17:39,666 [wrapper] ==== wrapper stdout END ====
[2025-06-29 20:17:39] 2025-06-29 18:17:39,668 [wrapper] ==== wrapper stderr END ====
[2025-06-29 20:17:39]  *** Error codes and diagnostics ***
[2025-06-29 20:17:39]     "exeErrorCode": 0,
[2025-06-29 20:17:39]     "exeErrorDiag": "",
[2025-06-29 20:17:39]     "pilotErrorCode": 0,
[2025-06-29 20:17:39]     "pilotErrorDiag": "",
[2025-06-29 20:17:39]  *** Listing of results directory ***
[2025-06-29 20:17:39] total 523020
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc    530466 Jun 22 03:04 pilot3.tar.gz
[2025-06-29 20:17:39] -rwx------. 1 boinc boinc     36245 Jun 22 03:12 runpilot2-wrapper.sh
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc      5112 Jun 22 03:12 queuedata.json
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc       100 Jun 29 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 20:17:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun 29 18:29 run_atlas
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc       105 Jun 29 18:29 job.xml
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc     15095 Jun 29 18:29 start_atlas.sh
[2025-06-29 20:17:39] drwxrwx--x. 2 boinc boinc        68 Jun 29 18:29 shared
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc    542883 Jun 29 18:29 input.tar.gz
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc      6391 Jun 29 18:29 init_data.xml
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc 295378198 Jun 29 18:29 EVNT.45275508._000328.pool.root.1
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc         0 Jun 29 18:29 boinc_lockfile
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc      2559 Jun 29 18:29 pandaJob.out
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc    970665 Jun 29 18:29 agis_schedconf.cvmfs.json
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc   1574086 Jun 29 18:29 agis_ddmendpoints.agis.ALL.json
[2025-06-29 20:17:39] drwx------. 4 boinc boinc      4096 Jun 29 18:29 pilot3
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc 234519782 Jun 29 20:16 HITS.45275512._007925.pool.root.1
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc       530 Jun 29 20:16 boinc_task_state.xml
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc      1013 Jun 29 20:16 memory_monitor_summary.json
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc    330695 Jun 29 20:16 log.45275512._007925.job.log.tgz.1
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc      7775 Jun 29 20:17 heartbeat.json
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc      8192 Jun 29 20:17 boinc_mmap_file
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc        27 Jun 29 20:17 wrapper_checkpoint.txt
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc        95 Jun 29 20:17 pilot_heartbeat.json
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc       820 Jun 29 20:17 pilotlog.txt
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc    592360 Jun 29 20:17 log.45275512._007925.job.log.1
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc       357 Jun 29 20:17 output.list
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc       620 Jun 29 20:17 runtime_log
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc    942080 Jun 29 20:17 result.tar.gz
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc       651 Jun 29 20:17 XD9MDmyQOn7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHCyKDmiUQOYo.diag
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc      8673 Jun 29 20:17 runtime_log.err
[2025-06-29 20:17:39] -rw-r--r--. 1 boinc boinc     20781 Jun 29 20:17 stderr.txt
[2025-06-29 20:17:39] HITS file was successfully produced:
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc 234519782 Jun 29 20:16 shared/HITS.pool.root.1
[2025-06-29 20:17:39]  *** Contents of shared directory: ***
[2025-06-29 20:17:39] total 518948
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc     15095 Jun 29 18:29 start_atlas.sh
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc    542883 Jun 29 18:29 input.tar.gz
[2025-06-29 20:17:39] -rw-r--r--. 2 boinc boinc 295378198 Jun 29 18:29 ATLAS.root_0
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc 234519782 Jun 29 20:16 HITS.pool.root.1
[2025-06-29 20:17:39] -rw-------. 1 boinc boinc    942080 Jun 29 20:17 result.tar.gz
20:17:41 (19540): run_atlas exited; CPU time 42438.982939
20:17:41 (19540): called boinc_finish(0)

</stderr_txt>
]]>

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