Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:47:34 (488796): wrapper (7.7.26015): starting
03:47:34 (488796): wrapper: running run_atlas (--nthreads 6)
[2025-07-01 03:47:34] Arguments: --nthreads 6
[2025-07-01 03:47:34] Threads: 6
[2025-07-01 03:47:34] Checking for CVMFS
[2025-07-01 03:47:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-01 03:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-01 03:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-01 03:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-01 03:47:35] 2.12.7.0 279101 17682 71296 147787 3 56 3239571 4096000 923 130560 0 44784607 99.997 618011 98 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-01 03:47:35] CVMFS is ok
[2025-07-01 03:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-01 03:47:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-01 03:47:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-01 03:47:35] Further information can be found at the LHC@home message board.
[2025-07-01 03:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-01 03:47:35] Checking for apptainer binary...
[2025-07-01 03:47:35] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2025-07-01 03:47:35] apptainer is not installed, using version from CVMFS
[2025-07-01 03:47:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-01 03:47:35] cachyos
[2025-07-01 03:47:35] apptainer works
[2025-07-01 03:47:35] Set ATHENA_PROC_NUMBER=6
[2025-07-01 03:47:35] Set ATHENA_CORE_NUMBER=6
[2025-07-01 03:47:35] Starting ATLAS job with PandaID=6701907629
[2025-07-01 03:47:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-01 06:20:28]  *** The last 200 lines of the pilot log: ***
[2025-07-01 06:20:28] 2025-07-01 04:20:16,688 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-01 06:20:28] 2025-07-01 04:20:16,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-01 06:20:28] 2025-07-01 04:20:16,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-01 06:20:28] 2025-07-01 04:20:16,691 | INFO     | fitting pss+swap vs Time
[2025-07-01 06:20:28] 2025-07-01 04:20:16,691 | INFO     | sum of square deviations: 1046484737.5
[2025-07-01 06:20:28] 2025-07-01 04:20:16,691 | INFO     | sum of deviations: -17888057606.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | mean x: 1751339034.5
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | mean y: 2513558.3466666667
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | -- intersect: 29938978385.93086
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | intersect: 29938978385.93086
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | chi2: 2.1520444451960463
[2025-07-01 06:20:28] 2025-07-01 04:20:16,692 | INFO     | sum of square deviations: 945282840.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | sum of deviations: -7567332308.000002
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | mean x: 1751338882.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | mean y: 2528720.5310344826
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | -- intersect: 14022632273.892061
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | intersect: 14022632273.892061
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | chi2: 1.4353415757228916
[2025-07-01 06:20:28] 2025-07-01 04:20:16,693 | INFO     | current chi2=1.4353415757228916 (change=33.30334887241907 %)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | sum of square deviations: 850825255.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | sum of deviations: -7195654062.000001
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | mean x: 1751338729.5
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | mean y: 2529328.0285714287
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | -- intersect: 14814063857.365734
[2025-07-01 06:20:28] 2025-07-01 04:20:16,694 | INFO     | intersect: 14814063857.365734
[2025-07-01 06:20:28] 2025-07-01 04:20:16,695 | INFO     | chi2: 1.4335629504547498
[2025-07-01 06:20:28] 2025-07-01 04:20:16,695 | INFO     | current chi2=1.4335629504547498 (change=0.12391651563816666 %)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,695 | INFO     | right removable region: 139
[2025-07-01 06:20:28] 2025-07-01 04:20:16,695 | INFO     | sum of square deviations: 945282840.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | sum of deviations: -34317977007.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | mean x: 1751339187.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | mean y: 2537705.124137931
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | -- intersect: 63583949963.62242
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | intersect: 63583949963.62242
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | chi2: 0.8856782862251389
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | current chi2=0.8856782862251389 (change=58.844795784668115 %)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,696 | INFO     | sum of square deviations: 850825255.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | sum of deviations: -27615819716.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | mean x: 1751339339.5
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | mean y: 2526870.214285714
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | -- intersect: 56846950771.53644
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | intersect: 56846950771.53644
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | chi2: 0.8620085244835081
[2025-07-01 06:20:28] 2025-07-01 04:20:16,697 | INFO     | current chi2=0.8620085244835081 (change=2.672501077396176 %)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,698 | INFO     | left removable region: 20
[2025-07-01 06:20:28] 2025-07-01 04:20:16,698 | INFO     | sum of square deviations: 522502820.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,698 | INFO     | sum of deviations: -5907193396.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,698 | INFO     | mean x: 1751339309.0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,698 | INFO     | mean y: 2522101.9831932774
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | -- intersect: 19802415239.93794
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | intersect: 19802415239.93794
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | chi2: 0.03950954974986775
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | -- intersect: 19802415239.93794
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | current memory leak: -11.31 B/s (using 119 data points, chi2=0.04)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | could have reported an average CPU frequency of 2681 MHz (8 samples)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | ..............................
[2025-07-01 06:20:28] 2025-07-01 04:20:16,699 | INFO     | . Timing measurements:
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . get job = 0 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . initial setup = 2 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . payload setup = 5 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . stage-in = 0 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . payload execution = 9121 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . stage-out = 0 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | . log creation = 0 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,700 | INFO     | ..............................
[2025-07-01 06:20:28] 2025-07-01 04:20:16,794 | INFO     | 
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | job summary report
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | --------------------------------------------------
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | PanDA job id: 6701907629
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | task id: 45275559
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | errors: (none)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | pilot state: finished 
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | transexitcode: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | exeerrorcode: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | exeerrordiag: 
[2025-07-01 06:20:28] 2025-07-01 04:20:16,795 | INFO     | exitcode: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | exitmsg: OK
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | cpuconsumptiontime: 51026 s
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | nevents: 400
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | neventsw: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | pid: 498916
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | pgrp: 498916
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | corecount: 6
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | event service: False
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | sizes: {0: 2366330, 1: 2366529, 4: 2366791, 11: 2366819, 9130: 2395155, 9133: 2404337, 9136: 2404475}
[2025-07-01 06:20:28] 2025-07-01 04:20:16,796 | INFO     | --------------------------------------------------
[2025-07-01 06:20:28] 2025-07-01 04:20:16,797 | INFO     | 
[2025-07-01 06:20:28] 2025-07-01 04:20:16,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-07-01 06:20:28] 2025-07-01 04:20:16,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,818 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-01 06:20:28] 2025-07-01 04:20:16,820 | INFO     | job 6701907629 has completed (purged errors)
[2025-07-01 06:20:28] 2025-07-01 04:20:16,820 | INFO     | overall cleanup function is called
[2025-07-01 06:20:28] 2025-07-01 04:20:17,828 | INFO     | --- collectZombieJob: --- 10, [498916]
[2025-07-01 06:20:28] 2025-07-01 04:20:17,828 | INFO     | zombie collector waiting for pid 498916
[2025-07-01 06:20:28] 2025-07-01 04:20:17,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-01 06:20:28] 2025-07-01 04:20:17,828 | INFO     | collected zombie processes
[2025-07-01 06:20:28] 2025-07-01 04:20:17,829 | INFO     | will attempt to kill all subprocesses of pid=498916
[2025-07-01 06:20:28] 2025-07-01 04:20:17,846 | INFO     | PID=492434 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-01 06:20:28] 2025-07-01 04:20:17,846 | INFO     | .. there are 2 such processes running
[2025-07-01 06:20:28] 2025-07-01 04:20:17,940 | INFO     | process IDs to be killed: [498916] (in reverse order)
[2025-07-01 06:20:28] 2025-07-01 04:20:17,991 | WARNING  | found no corresponding commands to process id(s)
[2025-07-01 06:20:28] 2025-07-01 04:20:17,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-01 06:20:28] 2025-07-01 04:20:17,995 | INFO     | did not find any defunct processes belonging to 498916
[2025-07-01 06:20:28] 2025-07-01 04:20:17,998 | INFO     | did not find any defunct processes belonging to 498916
[2025-07-01 06:20:28] 2025-07-01 04:20:17,999 | INFO     | ready for new job
[2025-07-01 06:20:28] 2025-07-01 04:20:17,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-01 06:20:28] 2025-07-01 04:20:18,000 | INFO     | ***************************************
[2025-07-01 06:20:28] 2025-07-01 04:20:18,000 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-01 06:20:28] 2025-07-01 04:20:18,001 | INFO     | ***************************************
[2025-07-01 06:20:28] 2025-07-01 04:20:18,001 | INFO     | 
[2025-07-01 06:20:28] 2025-07-01 04:20:18,001 | INFO     | architecture information:
[2025-07-01 06:20:28] 2025-07-01 04:20:18,002 | INFO     | executing command: cat /etc/os-release
[2025-07-01 06:20:28] 2025-07-01 04:20:18,015 | INFO     | cat /etc/os-release:
[2025-07-01 06:20:28] NAME="CentOS Linux"
[2025-07-01 06:20:28] VERSION="7 (Core)"
[2025-07-01 06:20:28] ID="centos"
[2025-07-01 06:20:28] ID_LIKE="rhel fedora"
[2025-07-01 06:20:28] VERSION_ID="7"
[2025-07-01 06:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-01 06:20:28] ANSI_COLOR="0;31"
[2025-07-01 06:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-01 06:20:28] HOME_URL="https://www.centos.org/"
[2025-07-01 06:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-01 06:20:28] 
[2025-07-01 06:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-01 06:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-01 06:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-01 06:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-01 06:20:28] 
[2025-07-01 06:20:28] 2025-07-01 04:20:18,016 | INFO     | ***************************************
[2025-07-01 06:20:28] 2025-07-01 04:20:18,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-07-01 06:20:28] 2025-07-01 04:20:18,536 | INFO     | sufficient remaining disk space (18598592512 B)
[2025-07-01 06:20:28] 2025-07-01 04:20:18,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-01 06:20:28] 2025-07-01 04:20:18,536 | INFO     | current server update state: UPDATING_FINAL
[2025-07-01 06:20:28] 2025-07-01 04:20:18,536 | INFO     | update_server=False
[2025-07-01 06:20:28] 2025-07-01 04:20:18,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-01 06:20:28] 2025-07-01 04:20:18,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-01 06:20:28] 2025-07-01 04:20:18,537 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-01 06:20:28] 2025-07-01 04:20:18,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-01 06:20:28] 2025-07-01 04:20:18,537 | INFO     | aborting loop
[2025-07-01 06:20:28] 2025-07-01 04:20:18,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-01 06:20:28] 2025-07-01 04:20:18,538 | INFO     | found 0 job(s) in 20 queues
[2025-07-01 06:20:28] 2025-07-01 04:20:18,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-01 06:20:28] 2025-07-01 04:20:18,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-01 06:20:28] 2025-07-01 04:20:18,935 | INFO     | all data control threads have been joined
[2025-07-01 06:20:28] 2025-07-01 04:20:18,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-01 06:20:28] 2025-07-01 04:20:19,112 | INFO     | all payload control threads have been joined
[2025-07-01 06:20:28] 2025-07-01 04:20:19,542 | INFO     | [job] retrieve thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,543 | INFO     | [job] job monitor thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,543 | INFO     | [job] queue monitor thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,646 | INFO     | [job] create_data_payload thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,699 | INFO     | [payload] failed_post thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,721 | INFO     | [payload] validate_post thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,791 | INFO     | [payload] validate_pre thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:19,940 | INFO     | [data] control thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,031 | INFO     | all job control threads have been joined
[2025-07-01 06:20:28] 2025-07-01 04:20:20,117 | INFO     | [payload] control thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,474 | INFO     | [data] copytool_in thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,543 | INFO     | [data] copytool_out thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,613 | INFO     | [payload] execute_payloads thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:20,759 | INFO     | [job] validate thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:21,036 | INFO     | [job] control thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:22,975 | INFO     | [data] queue_monitor thread has finished
[2025-07-01 06:20:28] 2025-07-01 04:20:23,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141010618176)>', '<ExcThread(monitor, started 140140647261952)>']
[2025-07-01 06:20:28] 2025-07-01 04:20:23,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-01 06:20:28] 2025-07-01 04:20:23,552 | INFO     | [monitor] control thread has ended
[2025-07-01 06:20:28] 2025-07-01 04:20:28,509 | INFO     | all workflow threads have been joined
[2025-07-01 06:20:28] 2025-07-01 04:20:28,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-01 06:20:28] 2025-07-01 04:20:28,510 | INFO     | traces error code: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:28,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-01 06:20:28] 2025-07-01 04:20:28,608 [wrapper] ==== pilot stdout END ====
[2025-07-01 06:20:28] 2025-07-01 04:20:28,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-01 06:20:28] 2025-07-01 04:20:28,613 [wrapper] pilotpid: 492434
[2025-07-01 06:20:28] 2025-07-01 04:20:28,616 [wrapper] Pilot exit status: 0
[2025-07-01 06:20:28] 2025-07-01 04:20:28,627 [wrapper] pandaids: 6701907629
[2025-07-01 06:20:28] 2025-07-01 04:20:28,661 [wrapper] cleanup supervisor_pilot  547761 492435
[2025-07-01 06:20:28] 2025-07-01 04:20:28,664 [wrapper] Test setup, not cleaning
[2025-07-01 06:20:28] 2025-07-01 04:20:28,667 [wrapper] apfmon messages muted
[2025-07-01 06:20:28] 2025-07-01 04:20:28,670 [wrapper] ==== wrapper stdout END ====
[2025-07-01 06:20:28] 2025-07-01 04:20:28,673 [wrapper] ==== wrapper stderr END ====
[2025-07-01 06:20:28]  *** Error codes and diagnostics ***
[2025-07-01 06:20:28]     "exeErrorCode": 0,
[2025-07-01 06:20:28]     "exeErrorDiag": "",
[2025-07-01 06:20:28]     "pilotErrorCode": 0,
[2025-07-01 06:20:28]     "pilotErrorDiag": "",
[2025-07-01 06:20:28]  *** Listing of results directory ***
[2025-07-01 06:20:28] total 551136
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc    530466 21. Jun 23:50 pilot3.tar.gz
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc      5112 22. Jun 00:08 queuedata.json
[2025-07-01 06:20:28] -rwx------ 1 boinc boinc     36245 22. Jun 00:09 runpilot2-wrapper.sh
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc       100  1. Jul 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-01 06:20:28] -rwxr-xr-x 1 boinc boinc      7986  1. Jul 03:47 run_atlas
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc       105  1. Jul 03:47 job.xml
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc 306611837  1. Jul 03:47 EVNT.45275555._000037.pool.root.1
[2025-07-01 06:20:28] drwxrwx--x 1 boinc boinc        76  1. Jul 03:47 shared
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc    542868  1. Jul 03:47 input.tar.gz
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc     15095  1. Jul 03:47 start_atlas.sh
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc         0  1. Jul 03:47 boinc_setup_complete
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc      8861  1. Jul 03:47 init_data.xml
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc         0  1. Jul 03:47 boinc_lockfile
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc      2496  1. Jul 03:47 pandaJob.out
[2025-07-01 06:20:28] -rw------- 1 boinc boinc    970041  1. Jul 03:47 agis_schedconf.cvmfs.json
[2025-07-01 06:20:28] -rw------- 1 boinc boinc   1574086  1. Jul 03:47 agis_ddmendpoints.agis.ALL.json
[2025-07-01 06:20:28] drwx------ 1 boinc boinc       368  1. Jul 03:47 pilot3
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc       530  1. Jul 06:19 boinc_task_state.xml
[2025-07-01 06:20:28] -rw------- 1 boinc boinc 251540751  1. Jul 06:19 HITS.45275559._001925.pool.root.1
[2025-07-01 06:20:28] -rw------- 1 boinc boinc        95  1. Jul 06:19 pilot_heartbeat.json
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc      8192  1. Jul 06:19 boinc_mmap_file
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc        27  1. Jul 06:20 wrapper_checkpoint.txt
[2025-07-01 06:20:28] -rw------- 1 boinc boinc      1014  1. Jul 06:20 memory_monitor_summary.json
[2025-07-01 06:20:28] -rw------- 1 boinc boinc    330885  1. Jul 06:20 log.45275559._001925.job.log.tgz.1
[2025-07-01 06:20:28] -rw------- 1 boinc boinc      7722  1. Jul 06:20 heartbeat.json
[2025-07-01 06:20:28] -rw------- 1 boinc boinc      4480  1. Jul 06:20 pilotlog.txt
[2025-07-01 06:20:28] -rw------- 1 boinc boinc    854158  1. Jul 06:20 log.45275559._001925.job.log.1
[2025-07-01 06:20:28] -rw------- 1 boinc boinc       357  1. Jul 06:20 output.list
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc       620  1. Jul 06:20 runtime_log
[2025-07-01 06:20:28] -rw------- 1 boinc boinc   1208320  1. Jul 06:20 result.tar.gz
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc      8617  1. Jul 06:20 runtime_log.err
[2025-07-01 06:20:28] -rw------- 1 boinc boinc       644  1. Jul 06:20 ECBODmiZLn7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbRhKDmP5K2Xn.diag
[2025-07-01 06:20:28] -rw-r--r-- 1 boinc boinc     21060  1. Jul 06:20 stderr.txt
[2025-07-01 06:20:28] HITS file was successfully produced:
[2025-07-01 06:20:28] -rw------- 1 boinc boinc 251540751  1. Jul 06:19 shared/HITS.pool.root.1
[2025-07-01 06:20:28]  *** Contents of shared directory: ***
[2025-07-01 06:20:28] total 546804
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc 306611837  1. Jul 03:47 ATLAS.root_0
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc    542868  1. Jul 03:47 input.tar.gz
[2025-07-01 06:20:28] -rw-r--r-- 2 boinc boinc     15095  1. Jul 03:47 start_atlas.sh
[2025-07-01 06:20:28] -rw------- 1 boinc boinc 251540751  1. Jul 06:19 HITS.pool.root.1
[2025-07-01 06:20:28] -rw------- 1 boinc boinc   1208320  1. Jul 06:20 result.tar.gz
06:20:30 (488796): run_atlas exited; CPU time 51084.500794
06:20:30 (488796): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN