Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-30 04:59:28 (14684): Detected: vboxwrapper 26206
2025-06-30 04:59:28 (14684): Detected: BOINC client v7.16.5
2025-06-30 04:59:29 (14684): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-06-30 04:59:29 (14684): Successfully copied 'init_data.xml' to the shared directory.
2025-06-30 04:59:30 (14684): Create VM. (boinc_a0406d622203ba41, slot#2)
2025-06-30 04:59:30 (14684): Setting Memory Size for VM. (4400MB)
2025-06-30 04:59:30 (14684): Setting CPU Count for VM. (4)
2025-06-30 04:59:31 (14684): Setting Chipset Options for VM.
2025-06-30 04:59:31 (14684): Setting Graphics Controller Options for VM.
2025-06-30 04:59:31 (14684): Setting Boot Options for VM.
2025-06-30 04:59:31 (14684): Setting Network Configuration for NAT.
2025-06-30 04:59:32 (14684): Enabling VM Network Access.
2025-06-30 04:59:32 (14684): Disabling USB Support for VM.
2025-06-30 04:59:32 (14684): Disabling COM Port Support for VM.
2025-06-30 04:59:33 (14684): Disabling LPT Port Support for VM.
2025-06-30 04:59:33 (14684): Disabling Audio Support for VM.
2025-06-30 04:59:33 (14684): Disabling Clipboard Support for VM.
2025-06-30 04:59:33 (14684): Disabling Drag and Drop Support for VM.
2025-06-30 04:59:34 (14684): Adding storage controller(s) to VM.
2025-06-30 04:59:34 (14684): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-30 04:59:34 (14684): Adding VirtualBox Guest Additions to VM.
2025-06-30 04:59:35 (14684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-30 04:59:35 (14684): forwarding host port 55134 to guest port 80
2025-06-30 04:59:35 (14684): Enabling remote desktop for VM.
2025-06-30 04:59:36 (14684): Enabling shared directory for VM.
2025-06-30 04:59:36 (14684): Starting VM using VBoxManage interface. (boinc_a0406d622203ba41, slot#2)
2025-06-30 04:59:40 (14684): Successfully started VM. (PID = '16108')
2025-06-30 04:59:40 (14684): Reporting VM Process ID to BOINC.
2025-06-30 04:59:40 (14684): Guest Log: BIOS: VirtualBox 5.2.44
2025-06-30 04:59:40 (14684): Guest Log: CPUID EDX: 0x178bfbff
2025-06-30 04:59:40 (14684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-30 04:59:40 (14684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-30 04:59:40 (14684): Detected: Web Application Enabled (http://localhost:55134)
2025-06-30 04:59:40 (14684): Detected: Remote Desktop Enabled (localhost:55135)
2025-06-30 04:59:40 (14684): Preference change detected
2025-06-30 04:59:40 (14684): Setting CPU throttle for VM. (100%)
2025-06-30 04:59:41 (14684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-30 04:59:42 (14684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-30 04:59:42 (14684): Guest Log: BIOS: Booting from Hard Disk...
2025-06-30 04:59:45 (14684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-30 04:59:45 (14684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-30 04:59:45 (14684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-30 04:59:51 (14684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-30 04:59:51 (14684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-30 04:59:57 (14684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000149 main     Log opened 2025-06-30T04:59:56.209774000Z
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000308 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000337 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000386 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000387 main     Process ID: 1306
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.000388 main     Package type: LINUX_64BITS_GENERIC
2025-06-30 04:59:57 (14684): Guest Log: 00:00:00.001522 main     5.2.32 r132073 started. Verbose level = 0
2025-06-30 04:59:57 (14684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-30 04:59:57 (14684): Guest Log: [INFO] Mounting shared directory
2025-06-30 04:59:57 (14684): Guest Log: [INFO] Checking for init_data.xml
2025-06-30 05:00:00 (14684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-30 05:00:00 (14684): Guest Log: [INFO] Detected branch: prod
2025-06-30 05:00:01 (14684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-30 05:00:01 (14684): Guest Log: Copying input files
2025-06-30 05:00:03 (14684): Guest Log: Copied input files into RunAtlas.
2025-06-30 05:00:03 (14684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-30 05:00:03 (14684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-30 05:00:03 (14684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-30 05:00:03 (14684): Guest Log: Further information can be found at the LHC@home message board.
2025-06-30 05:00:07 (14684): Guest Log: 00:00:10.003153 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 561 079 000ns (GuestNow=1 751 248 807 651 327 000 ns GuestLast=1 751 259 596 212 406 000 ns fSetTimeLastLoop=true )
2025-06-30 05:00:14 (14684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-30 05:00:14 (14684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-30 05:00:14 (14684): Guest Log: 2.6.3.0 1581 0 32036 147737 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-30 05:00:15 (14684): Guest Log: copied the webapp to /var/www
2025-06-30 05:00:15 (14684): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-30 05:00:15 (14684): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-30 05:00:15 (14684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-30 05:00:15 (14684): Guest Log:  *** Starting ATLAS job. (PandaID=6712980981 taskID=45368821) ***
2025-06-30 05:03:57 (14684): Guest Log:  *** Job finished ***
2025-06-30 05:03:57 (14684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:34,584 | INFO     | all workflow threads have been joined
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:34,584 | INFO     | end of generic workflow (traces error code: 0)
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:34,584 | INFO     | traces error code: 0
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:34,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,234 | INFO     | PID=5901 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,235 | INFO     | found 0 job(s) in 20 queues
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,235 | INFO     | [monitor] control thread has ended
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,351 [wrapper] ==== pilot stdout END ====
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,356 [wrapper] ==== wrapper stdout RESUME ====
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,361 [wrapper] pilotpid: 5901
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,366 [wrapper] Pilot exit status: 0
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,408 [wrapper] pandaids: 6712980981
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,438 [wrapper] cleanup supervisor_pilot  5907 5902
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,443 [wrapper] Test setup, not cleaning
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,447 [wrapper] apfmon messages muted
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,452 [wrapper] ==== wrapper stdout END ====
2025-06-30 05:03:57 (14684): Guest Log: 2025-06-30 02:03:54,457 [wrapper] ==== wrapper stderr END ====
2025-06-30 05:03:57 (14684): Guest Log:  *** Error codes and diagnostics ***
2025-06-30 05:03:57 (14684): Guest Log:     "exeErrorCode": 0,
2025-06-30 05:03:57 (14684): Guest Log:     "exeErrorDiag": "",
2025-06-30 05:03:57 (14684): Guest Log:     "pilotErrorCode": 1305,
2025-06-30 05:03:57 (14684): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-06-30 05:03:57 (14684): Guest Log:  *** Listing of results directory ***
2025-06-30 05:03:57 (14684): Guest Log: total 3836
2025-06-30 05:03:57 (14684): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jun 29 10:42 pilot3.tar.gz
2025-06-30 05:03:57 (14684): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jun 29 10:56 queuedata.json
2025-06-30 05:03:57 (14684): Guest Log: -rwx------. 1 atlas atlas   36245 Jun 29 10:58 runpilot2-wrapper.sh
2025-06-30 05:03:57 (14684): Guest Log: -rwxr-xr-x. 1 atlas atlas    8857 Jun 30 02:00 init_data.xml
2025-06-30 05:03:57 (14684): Guest Log: -rwxr-xr-x. 1 atlas atlas  543074 Jun 30 02:00 input.tar.gz
2025-06-30 05:03:57 (14684): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jun 30 02:00 start_atlas.sh
2025-06-30 05:03:57 (14684): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 30 02:00 EVNT.45368816._000009.pool.root.1 -> /data/./ATLAS.root_0
2025-06-30 05:03:57 (14684): Guest Log: -rw-r--r--. 1 atlas atlas    2908 Jun 30 02:00 pandaJob.out
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas  970673 Jun 30 02:00 agis_schedconf.cvmfs.json
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas 1574086 Jun 30 02:00 agis_ddmendpoints.agis.ALL.json
2025-06-30 05:03:57 (14684): Guest Log: drwx------. 4 atlas atlas    4096 Jun 30 02:00 pilot3
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas     881 Jun 30 02:01 memory_monitor_summary.json
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas    8045 Jun 30 02:01 log.45368821._000839.job.log.tgz.1
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas    2599 Jun 30 02:03 heartbeat.json
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas      95 Jun 30 02:03 pilot_heartbeat.json
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas     744 Jun 30 02:03 pilotlog.txt
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas   73880 Jun 30 02:03 log.45368821._000839.job.log.1
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas     186 Jun 30 02:03 output.list
2025-06-30 05:03:57 (14684): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jun 30 02:03 runtime_log
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas   92160 Jun 30 02:03 result.tar.gz
2025-06-30 05:03:57 (14684): Guest Log: -rw-------. 1 atlas atlas     654 Jun 30 02:03 vgMLDmsu4p7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlUlKDm1evAXo.diag
2025-06-30 05:03:57 (14684): Guest Log: -rw-r--r--. 1 atlas atlas    8482 Jun 30 02:03 runtime_log.err
2025-06-30 05:03:57 (14684): Guest Log: Looking for outputfile HITS.45368821._000839.pool.root.1
2025-06-30 05:03:57 (14684): Guest Log: No HITS file was produced
2025-06-30 05:03:57 (14684): Guest Log: Successfully finished the ATLAS job!
2025-06-30 05:03:57 (14684): Guest Log: Copying the results back to the shared directory!
2025-06-30 05:03:57 (14684): Guest Log:  *** Contents of shared directory: ***
2025-06-30 05:03:57 (14684): Guest Log: total 328616
2025-06-30 05:03:57 (14684): Guest Log: -rwxrwxrwx. 1 root root 335831345 Jun 30 01:59 ATLAS.root_0
2025-06-30 05:03:57 (14684): Guest Log: -rwxrwxrwx. 1 root root      8857 Jun 30 01:59 init_data.xml
2025-06-30 05:03:57 (14684): Guest Log: -rwxrwxrwx. 1 root root    543074 Jun 29 10:59 input.tar.gz
2025-06-30 05:03:57 (14684): Guest Log: -rwxrwxrwx. 1 root root     92160 Jun 30 02:03 result.tar.gz
2025-06-30 05:03:57 (14684): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 29 10:59 start_atlas.sh
2025-06-30 05:03:57 (14684): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-30 05:03:57 (14684): VM Completion File Detected.
2025-06-30 05:03:57 (14684): Powering off VM.
2025-06-30 05:03:57 (14684): Successfully stopped VM.
2025-06-30 05:03:57 (14684): Deregistering VM. (boinc_a0406d622203ba41, slot#2)
2025-06-30 05:03:57 (14684): Removing network bandwidth throttle group from VM.
2025-06-30 05:03:58 (14684): Removing VM from VirtualBox.
05:04:03 (14684): called boinc_finish(0)

</stderr_txt>
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