Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-29 10:43:55 (26784): Detected: vboxwrapper 26206
2025-06-29 10:43:55 (26784): Detected: BOINC client v8.2.4
2025-06-29 10:43:56 (26784): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-29 10:43:56 (26784): Successfully copied 'init_data.xml' to the shared directory.
2025-06-29 10:43:57 (26784): Create VM. (boinc_73fc6fb651b555ff, slot#19)
2025-06-29 10:43:57 (26784): Setting Memory Size for VM. (4096MB)
2025-06-29 10:43:58 (26784): Setting CPU Count for VM. (1)
2025-06-29 10:43:58 (26784): Setting Chipset Options for VM.
2025-06-29 10:43:58 (26784): Setting Graphics Controller Options for VM.
2025-06-29 10:43:58 (26784): Setting Boot Options for VM.
2025-06-29 10:43:59 (26784): Setting Network Configuration for NAT.
2025-06-29 10:43:59 (26784): Enabling VM Network Access.
2025-06-29 10:43:59 (26784): Disabling USB Support for VM.
2025-06-29 10:43:59 (26784): Disabling COM Port Support for VM.
2025-06-29 10:44:00 (26784): Disabling LPT Port Support for VM.
2025-06-29 10:44:00 (26784): Disabling Audio Support for VM.
2025-06-29 10:44:00 (26784): Disabling Clipboard Support for VM.
2025-06-29 10:44:01 (26784): Disabling Drag and Drop Support for VM.
2025-06-29 10:44:01 (26784): Adding storage controller(s) to VM.
2025-06-29 10:44:01 (26784): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-29 10:44:02 (26784): Adding VirtualBox Guest Additions to VM.
2025-06-29 10:44:02 (26784): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-29 10:44:02 (26784): forwarding host port 54360 to guest port 80
2025-06-29 10:44:02 (26784): Enabling remote desktop for VM.
2025-06-29 10:44:03 (26784): Required extension pack not installed, remote desktop not enabled.
2025-06-29 10:44:03 (26784): Enabling shared directory for VM.
2025-06-29 10:44:03 (26784): Starting VM using VBoxManage interface. (boinc_73fc6fb651b555ff, slot#19)
2025-06-29 10:44:08 (26784): Successfully started VM. (PID = '23508')
2025-06-29 10:44:08 (26784): Reporting VM Process ID to BOINC.
2025-06-29 10:44:08 (26784): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-29 10:44:08 (26784): Guest Log: CPUID EDX: 0x178bfbff
2025-06-29 10:44:08 (26784): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-29 10:44:08 (26784): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-29 10:44:08 (26784): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-29 10:44:08 (26784): Detected: Web Application Enabled (http://localhost:54360)
2025-06-29 10:44:08 (26784): Preference change detected
2025-06-29 10:44:08 (26784): Setting CPU throttle for VM. (100%)
2025-06-29 10:44:08 (26784): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 10:44:10 (26784): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-29 10:44:10 (26784): Guest Log: BIOS: Booting from Hard Disk...
2025-06-29 10:44:12 (26784): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-29 10:44:12 (26784): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-29 10:44:12 (26784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-29 10:44:15 (26784): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-29 10:44:15 (26784): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-29 10:44:20 (26784): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000078 main     Log opened 2025-06-29T10:44:18.739852000Z
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000153 main     OS Product: Linux
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000171 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000186 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000200 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000201 main     Process ID: 1249
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000201 main     Package type: LINUX_64BITS_GENERIC
2025-06-29 10:44:20 (26784): Guest Log: 00:00:00.000698 main     5.2.32 r132073 started. Verbose level = 0
2025-06-29 10:44:20 (26784): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-29 10:44:20 (26784): Guest Log: [INFO] Mounting shared directory
2025-06-29 10:44:20 (26784): Guest Log: [INFO] Checking for init_data.xml
2025-06-29 10:44:22 (26784): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-29 10:44:22 (26784): Guest Log: [INFO] Detected branch: prod
2025-06-29 10:44:22 (26784): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-29 10:44:22 (26784): Guest Log: Copying input files
2025-06-29 10:44:23 (26784): Guest Log: Copied input files into RunAtlas.
2025-06-29 10:44:23 (26784): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-06-29 10:44:29 (26784): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-29 10:44:29 (26784): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-29 10:44:29 (26784): Guest Log: 2.6.3.0 1518 0 31552 147711 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-06-29 10:44:30 (26784): Guest Log: copied the webapp to /var/www
2025-06-29 10:44:30 (26784): Guest Log: core_number=1
2025-06-29 10:44:30 (26784): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-29 10:44:30 (26784): Guest Log:  *** Starting ATLAS job. (PandaID=6712842822 taskID=45400023) ***
2025-06-29 10:44:30 (26784): Guest Log: 00:00:10.009596 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 849 936 000ns (GuestNow=1 751 186 669 898 699 000 ns GuestLast=1 751 193 858 748 635 000 ns fSetTimeLastLoop=true )
2025-06-29 12:24:10 (26784): Status Report: Elapsed Time: '6000.000000'
2025-06-29 12:24:10 (26784): Status Report: CPU Time: '5846.187500'
2025-06-29 14:04:13 (26784): Status Report: Elapsed Time: '12000.000000'
2025-06-29 14:04:13 (26784): Status Report: CPU Time: '11820.343750'
2025-06-29 15:44:16 (26784): Status Report: Elapsed Time: '18000.000000'
2025-06-29 15:44:16 (26784): Status Report: CPU Time: '17792.203125'
2025-06-29 17:24:19 (26784): Status Report: Elapsed Time: '24000.000000'
2025-06-29 17:24:19 (26784): Status Report: CPU Time: '23767.781250'
2025-06-29 19:04:21 (26784): Status Report: Elapsed Time: '30000.000000'
2025-06-29 19:04:21 (26784): Status Report: CPU Time: '29742.953125'
2025-06-29 20:16:39 (26784): Guest Log:  *** Job finished ***
2025-06-29 20:16:39 (26784): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:13,455 | INFO     | all workflow threads have been joined
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:13,455 | INFO     | end of generic workflow (traces error code: 0)
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:13,455 | INFO     | traces error code: 0
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:13,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,745 | INFO     | PID=5765 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,745 | INFO     | found 0 job(s) in 20 queues
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,746 | INFO     | [monitor] control thread has ended
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,825 [wrapper] ==== pilot stdout END ====
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,827 [wrapper] ==== wrapper stdout RESUME ====
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,828 [wrapper] pilotpid: 5765
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,829 [wrapper] Pilot exit status: 0
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,851 [wrapper] pandaids: 6712842822
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,863 [wrapper] cleanup supervisor_pilot 14023 5766
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,865 [wrapper] Test setup, not cleaning
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,867 [wrapper] apfmon messages muted
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,869 [wrapper] ==== wrapper stdout END ====
2025-06-29 20:16:39 (26784): Guest Log: 2025-06-29 18:16:25,870 [wrapper] ==== wrapper stderr END ====
2025-06-29 20:16:39 (26784): Guest Log:  *** Error codes and diagnostics ***
2025-06-29 20:16:39 (26784): Guest Log:     "exeErrorCode": 0,
2025-06-29 20:16:39 (26784): Guest Log:     "exeErrorDiag": "",
2025-06-29 20:16:39 (26784): Guest Log:     "pilotErrorCode": 0,
2025-06-29 20:16:39 (26784): Guest Log:     "pilotErrorDiag": "",
2025-06-29 20:16:39 (26784): Guest Log:  *** Listing of results directory ***
2025-06-29 20:16:39 (26784): Guest Log: total 244740
2025-06-29 20:16:39 (26784): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 29 08:16 pilot3.tar.gz
2025-06-29 20:16:39 (26784): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 29 08:26 queuedata.json
2025-06-29 20:16:39 (26784): Guest Log: -rwx------. 1 atlas atlas     36245 Jun 29 08:27 runpilot2-wrapper.sh
2025-06-29 20:16:39 (26784): Guest Log: -rwxr-xr-x. 1 atlas atlas      9353 Jun 29 08:44 init_data.xml
2025-06-29 20:16:39 (26784): Guest Log: -rwxr-xr-x. 1 atlas atlas    542889 Jun 29 08:44 input.tar.gz
2025-06-29 20:16:39 (26784): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jun 29 08:44 start_atlas.sh
2025-06-29 20:16:39 (26784): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 29 08:44 EVNT.45400021._000005.pool.root.1 -> /data/./ATLAS.root_0
2025-06-29 20:16:39 (26784): Guest Log: -rw-r--r--. 1 atlas atlas      2620 Jun 29 08:44 pandaJob.out
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas    970676 Jun 29 08:44 agis_schedconf.cvmfs.json
2025-06-29 20:16:39 (26784): Guest Log: drwx------. 4 atlas atlas      4096 Jun 29 08:44 pilot3
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas 239888250 Jun 29 18:15 HITS.45400023._000107.pool.root.1
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas        95 Jun 29 18:15 pilot_heartbeat.json
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas      1022 Jun 29 18:15 memory_monitor_summary.json
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas   1574086 Jun 29 18:15 agis_ddmendpoints.agis.ALL.json
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas    457387 Jun 29 18:15 log.45400023._000107.job.log.tgz.1
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas      7766 Jun 29 18:15 heartbeat.json
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas       744 Jun 29 18:16 pilotlog.txt
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas   3010936 Jun 29 18:16 log.45400023._000107.job.log.1
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas       357 Jun 29 18:16 output.list
2025-06-29 20:16:39 (26784): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 29 18:16 runtime_log
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas   3491840 Jun 29 18:16 result.tar.gz
2025-06-29 20:16:39 (26784): Guest Log: -rw-r--r--. 1 atlas atlas      8466 Jun 29 18:16 runtime_log.err
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas       658 Jun 29 18:16 99uLDmYY2p7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfSlKDmpQKD8m.diag
2025-06-29 20:16:39 (26784): Guest Log: Looking for outputfile HITS.45400023._000107.pool.root.1
2025-06-29 20:16:39 (26784): Guest Log: HITS file was successfully produced
2025-06-29 20:16:39 (26784): Guest Log: -rw-------. 1 atlas atlas 239888250 Jun 29 18:15 /home/atlas/RunAtlas/HITS.45400023._000107.pool.root.1
2025-06-29 20:16:40 (26784): Guest Log: Successfully finished the ATLAS job!
2025-06-29 20:16:40 (26784): Guest Log: Copying the results back to the shared directory!
2025-06-29 20:16:40 (26784): Guest Log:  *** Contents of shared directory: ***
2025-06-29 20:16:40 (26784): Guest Log: total 526960
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root 295646609 Jun 29 08:43 ATLAS.root_0
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root 239888250 Jun 29  2025 HITS.pool.root.1
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root      9353 Jun 29 08:43 init_data.xml
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root    542889 Jun 29 08:28 input.tar.gz
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root   3491840 Jun 29  2025 result.tar.gz
2025-06-29 20:16:40 (26784): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 29 08:28 start_atlas.sh
2025-06-29 20:16:40 (26784): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-29 20:16:40 (26784): VM Completion File Detected.
2025-06-29 20:16:40 (26784): Powering off VM.
2025-06-29 20:16:41 (26784): Successfully stopped VM.
2025-06-29 20:16:41 (26784): Deregistering VM. (boinc_73fc6fb651b555ff, slot#19)
2025-06-29 20:16:41 (26784): Removing network bandwidth throttle group from VM.
2025-06-29 20:16:41 (26784): Removing VM from VirtualBox.
20:16:46 (26784): called boinc_finish(0)

</stderr_txt>
]]>

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