Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:08:22 (1001031): wrapper (7.7.26015): starting
06:08:22 (1001031): wrapper: running run_atlas (--nthreads 4)
[2025-06-29 06:08:22] Arguments: --nthreads 4
[2025-06-29 06:08:22] Threads: 4
[2025-06-29 06:08:22] Checking for CVMFS
[2025-06-29 06:08:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 06:08:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 06:08:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 06:08:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 06:08:23] 2.13.0.0 3500275 665 49500 147718 3 187 3675300 6144001 13845 130560 0 4021191 99.999 24046 664 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-29 06:08:23] CVMFS is ok
[2025-06-29 06:08:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-29 06:08:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-29 06:08:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-29 06:08:23] Further information can be found at the LHC@home message board.
[2025-06-29 06:08:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 06:08:23] Checking for apptainer binary...
[2025-06-29 06:08:23] apptainer is not installed, using version from CVMFS
[2025-06-29 06:08:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 06:08:23] mz32
[2025-06-29 06:08:23] apptainer works
[2025-06-29 06:08:23] Set ATHENA_PROC_NUMBER=4
[2025-06-29 06:08:23] Set ATHENA_CORE_NUMBER=4
[2025-06-29 06:08:23] Starting ATLAS job with PandaID=6712817964
[2025-06-29 06:08:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 11:43:28]  *** The last 200 lines of the pilot log: ***
[2025-06-29 11:43:28] 2025-06-29 18:42:53,858 | INFO     | monitor loop #1416: job 0:6712817964 is in state 'finished'
[2025-06-29 11:43:28] 2025-06-29 18:42:53,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,185 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-29 11:43:28] 2025-06-29 18:42:56,206 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 1984.2075000000004
[2025-06-29 11:43:28] 2025-06-29 18:42:56,231 | INFO     | using path: /var/lib/boinc-client/slots/30/PanDA_Pilot-6712817964/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,232 | INFO     | extracted standard info from prmon json
[2025-06-29 11:43:28] 2025-06-29 18:42:56,232 | INFO     | extracted standard memory fields from prmon json
[2025-06-29 11:43:28] 2025-06-29 18:42:56,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-29 11:43:28] 2025-06-29 18:42:56,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 11:43:28] 2025-06-29 18:42:56,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 11:43:28] 2025-06-29 18:42:56,238 | INFO     | fitting pss+swap vs Time
[2025-06-29 11:43:28] 2025-06-29 18:42:56,239 | INFO     | sum of square deviations: 10941980042.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,242 | INFO     | sum of deviations: 68129799072.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,242 | INFO     | mean x: 1751212532.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,242 | INFO     | mean y: 2362273.225609756
[2025-06-29 11:43:28] 2025-06-29 18:42:56,242 | INFO     | -- intersect: -10901492194.94481
[2025-06-29 11:43:28] 2025-06-29 18:42:56,242 | INFO     | intersect: -10901492194.94481
[2025-06-29 11:43:28] 2025-06-29 18:42:56,243 | INFO     | chi2: 1.41973550485749
[2025-06-29 11:43:28] 2025-06-29 18:42:56,243 | INFO     | sum of square deviations: 10449170802.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | sum of deviations: 65051385577.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | mean x: 1751212380.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | mean y: 2361320.5386996903
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | -- intersect: -10899823543.430742
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | intersect: -10899823543.430742
[2025-06-29 11:43:28] 2025-06-29 18:42:56,245 | INFO     | chi2: 1.4197280477312932
[2025-06-29 11:43:28] 2025-06-29 18:42:56,246 | INFO     | current chi2=1.4197280477312932 (change=0.0005252475669763773 %)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,246 | INFO     | right removable region: 322
[2025-06-29 11:43:28] 2025-06-29 18:42:56,246 | INFO     | sum of square deviations: 10449170802.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | sum of deviations: 22575600227.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | mean x: 1751212685.0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | mean y: 2376263.1114551085
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | -- intersect: -3781146682.215865
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | intersect: -3781146682.215865
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | chi2: 0.019442632927389084
[2025-06-29 11:43:28] 2025-06-29 18:42:56,248 | INFO     | current chi2=0.019442632927389084 (change=98.6305454177297 %)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,249 | INFO     | sum of square deviations: 9971385099.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | sum of deviations: 20362070992.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | mean x: 1751212837.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | mean y: 2376966.952830189
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | -- intersect: -3573687919.15215
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | intersect: -3573687919.15215
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | chi2: 0.016703432707401208
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | current chi2=0.016703432707401208 (change=14.088627966272663 %)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,251 | INFO     | left removable region: 20
[2025-06-29 11:43:28] 2025-06-29 18:42:56,252 | INFO     | sum of square deviations: 8540720135.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,253 | INFO     | sum of deviations: 20330997958.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | mean x: 1751212959.5
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | mean y: 2375126.0298013245
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | -- intersect: -4166349119.6580453
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | intersect: -4166349119.6580453
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | chi2: 0.011596458983010587
[2025-06-29 11:43:28] 2025-06-29 18:42:56,257 | INFO     | -- intersect: -4166349119.6580453
[2025-06-29 11:43:28] 2025-06-29 18:42:56,258 | INFO     | current memory leak: 2.38 B/s (using 302 data points, chi2=0.01)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,258 | INFO     | could have reported an average CPU frequency of 1994 MHz (15 samples)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,258 | INFO     | ..............................
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . Timing measurements:
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . get job = 0 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . initial setup = 3 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . payload setup = 11 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . stage-in = 0 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . payload execution = 20010 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . stage-out = 3 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | . log creation = 0 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,259 | INFO     | ..............................
[2025-06-29 11:43:28] 2025-06-29 18:42:56,388 | INFO     | 
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | job summary report
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | --------------------------------------------------
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | PanDA job id: 6712817964
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | task id: 45399795
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | errors: (none)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | pilot state: finished 
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | transexitcode: 0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | exeerrorcode: 0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | exeerrordiag: 
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | exitcode: 0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,389 | INFO     | exitmsg: OK
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | cpuconsumptiontime: 78240 s
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | nevents: 400
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | neventsw: 0
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | pid: 1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | pgrp: 1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | corecount: 4
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | event service: False
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | sizes: {0: 2365848, 1: 2366712, 9: 2366974, 12: 2367002, 20026: 2400307, 20029: 2409321, 20030: 2409505, 20036: 2409699}
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | --------------------------------------------------
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | 
[2025-06-29 11:43:28] 2025-06-29 18:42:56,390 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/30
[2025-06-29 11:43:28] 2025-06-29 18:42:56,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | job 6712817964 has completed (purged errors)
[2025-06-29 11:43:28] 2025-06-29 18:42:56,451 | INFO     | overall cleanup function is called
[2025-06-29 11:43:28] 2025-06-29 18:42:57,460 | INFO     | --- collectZombieJob: --- 10, [1014883]
[2025-06-29 11:43:28] 2025-06-29 18:42:57,461 | INFO     | zombie collector waiting for pid 1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:57,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 11:43:28] 2025-06-29 18:42:57,461 | INFO     | collected zombie processes
[2025-06-29 11:43:28] 2025-06-29 18:42:57,461 | INFO     | will attempt to kill all subprocesses of pid=1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:57,893 | INFO     | process IDs to be killed: [1014883] (in reverse order)
[2025-06-29 11:43:28] 2025-06-29 18:42:58,031 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 11:43:28] 2025-06-29 18:42:58,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 11:43:28] 2025-06-29 18:42:58,048 | INFO     | did not find any defunct processes belonging to 1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:58,060 | INFO     | did not find any defunct processes belonging to 1014883
[2025-06-29 11:43:28] 2025-06-29 18:42:58,061 | INFO     | ready for new job
[2025-06-29 11:43:28] 2025-06-29 18:42:58,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 11:43:28] 2025-06-29 18:42:58,063 | INFO     | ***************************************
[2025-06-29 11:43:28] 2025-06-29 18:42:58,064 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 11:43:28] 2025-06-29 18:42:58,064 | INFO     | ***************************************
[2025-06-29 11:43:28] 2025-06-29 18:42:58,064 | INFO     | 
[2025-06-29 11:43:28] 2025-06-29 18:42:58,072 | INFO     | architecture information:
[2025-06-29 11:43:28] 2025-06-29 18:42:58,073 | INFO     | executing command: cat /etc/os-release
[2025-06-29 11:43:28] 2025-06-29 18:42:58,095 | INFO     | cat /etc/os-release:
[2025-06-29 11:43:28] NAME="CentOS Linux"
[2025-06-29 11:43:28] VERSION="7 (Core)"
[2025-06-29 11:43:28] ID="centos"
[2025-06-29 11:43:28] ID_LIKE="rhel fedora"
[2025-06-29 11:43:28] VERSION_ID="7"
[2025-06-29 11:43:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 11:43:28] ANSI_COLOR="0;31"
[2025-06-29 11:43:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 11:43:28] HOME_URL="https://www.centos.org/"
[2025-06-29 11:43:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 11:43:28] 
[2025-06-29 11:43:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 11:43:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 11:43:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 11:43:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 11:43:28] 
[2025-06-29 11:43:28] 2025-06-29 18:42:58,095 | INFO     | ***************************************
[2025-06-29 11:43:28] 2025-06-29 18:42:58,598 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/30
[2025-06-29 11:43:28] 2025-06-29 18:42:58,618 | INFO     | sufficient remaining disk space (270969864192 B)
[2025-06-29 11:43:28] 2025-06-29 18:42:58,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 11:43:28] 2025-06-29 18:42:58,619 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 11:43:28] 2025-06-29 18:42:58,619 | INFO     | update_server=False
[2025-06-29 11:43:28] 2025-06-29 18:42:58,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 11:43:28] 2025-06-29 18:42:58,868 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-29 11:43:28] 2025-06-29 18:42:58,869 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-29 11:43:28] 2025-06-29 18:42:58,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 11:43:28] 2025-06-29 18:42:58,869 | INFO     | will abort loop
[2025-06-29 11:43:28] 2025-06-29 18:42:59,455 | INFO     | all data control threads have been joined
[2025-06-29 11:43:28] 2025-06-29 18:42:59,624 | INFO     | [job] retrieve thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:42:59,640 | INFO     | [payload] validate_post thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:42:59,646 | INFO     | all job control threads have been joined
[2025-06-29 11:43:28] 2025-06-29 18:42:59,710 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:42:59,850 | INFO     | all payload control threads have been joined
[2025-06-29 11:43:28] 2025-06-29 18:42:59,874 | INFO     | [job] job monitor thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:42:59,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 11:43:28] 2025-06-29 18:43:00,121 | INFO     | [data] copytool_in thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,228 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,266 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 11:43:28] 2025-06-29 18:43:00,461 | INFO     | [data] control thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,583 | INFO     | [payload] failed_post thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,653 | INFO     | [job] control thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:00,856 | INFO     | [payload] control thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:01,039 | INFO     | [job] validate thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:01,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 11:43:28] 2025-06-29 18:43:01,889 | INFO     | [data] copytool_out thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:02,383 | INFO     | [job] queue monitor thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:04,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:08,679 | INFO     | job.realtimelogging is not enabled
[2025-06-29 11:43:28] 2025-06-29 18:43:09,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 11:43:28] 2025-06-29 18:43:10,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130551291324224)>', '<ExcThread(monitor, started 130550597662464)>']
[2025-06-29 11:43:28] 2025-06-29 18:43:15,447 | INFO     | all workflow threads have been joined
[2025-06-29 11:43:28] 2025-06-29 18:43:15,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 11:43:28] 2025-06-29 18:43:15,448 | INFO     | traces error code: 0
[2025-06-29 11:43:28] 2025-06-29 18:43:15,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 11:43:28] 2025-06-29 18:43:28,423 | INFO     | PID=1005182 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-29 11:43:28] 2025-06-29 18:43:28,423 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 11:43:28] 2025-06-29 18:43:28,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 11:43:28] 2025-06-29 18:43:28,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 11:43:28] 2025-06-29 18:43:28,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 11:43:28] 2025-06-29 18:43:28,424 | INFO     | [monitor] control thread has ended
[2025-06-29 11:43:28] 2025-06-29 18:43:28,599 [wrapper] ==== pilot stdout END ====
[2025-06-29 11:43:28] 2025-06-29 18:43:28,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 11:43:28] 2025-06-29 18:43:28,611 [wrapper] pilotpid: 1005182
[2025-06-29 11:43:28] 2025-06-29 18:43:28,615 [wrapper] Pilot exit status: 0
[2025-06-29 11:43:28] 2025-06-29 18:43:28,631 [wrapper] pandaids: 6712817964
[2025-06-29 11:43:28] 2025-06-29 18:43:28,737 [wrapper] cleanup supervisor_pilot 1575227 1005183
[2025-06-29 11:43:28] 2025-06-29 18:43:28,747 [wrapper] Test setup, not cleaning
[2025-06-29 11:43:28] 2025-06-29 18:43:28,753 [wrapper] apfmon messages muted
[2025-06-29 11:43:28] 2025-06-29 18:43:28,757 [wrapper] ==== wrapper stdout END ====
[2025-06-29 11:43:28] 2025-06-29 18:43:28,763 [wrapper] ==== wrapper stderr END ====
[2025-06-29 11:43:28]  *** Error codes and diagnostics ***
[2025-06-29 11:43:28]     "exeErrorCode": 0,
[2025-06-29 11:43:28]     "exeErrorDiag": "",
[2025-06-29 11:43:28]     "pilotErrorCode": 0,
[2025-06-29 11:43:28]     "pilotErrorDiag": "",
[2025-06-29 11:43:28]  *** Listing of results directory ***
[2025-06-29 11:43:28] total 571676
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc    530466 Jun 29 01:00 pilot3.tar.gz
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc      5112 Jun 29 01:05 queuedata.json
[2025-06-29 11:43:28] -rwx------ 1 boinc boinc     36245 Jun 29 01:05 runpilot2-wrapper.sh
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc       100 Jun 29 06:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 11:43:28] -rwxr-xr-x 1 boinc boinc      7986 Jun 29 06:08 run_atlas
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc       105 Jun 29 06:08 job.xml
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc 298955905 Jun 29 06:08 EVNT.45399793._000005.pool.root.1
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc     15095 Jun 29 06:08 start_atlas.sh
[2025-06-29 11:43:28] drwxrwx--x 2 boinc boinc      4096 Jun 29 06:08 shared
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc    542888 Jun 29 06:08 input.tar.gz
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc     10263 Jun 29 06:08 init_data.xml
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc         0 Jun 29 06:08 boinc_setup_complete
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc         0 Jun 29 06:08 boinc_lockfile
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc      2622 Jun 29 06:08 pandaJob.out
[2025-06-29 11:43:28] -rw------- 1 boinc boinc    970676 Jun 29 06:08 agis_schedconf.cvmfs.json
[2025-06-29 11:43:28] drwx------ 4 boinc boinc      4096 Jun 29 06:08 pilot3
[2025-06-29 11:43:28] -rw------- 1 boinc boinc 278199145 Jun 29 11:41 HITS.45399795._000111.pool.root.1
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc       531 Jun 29 11:42 boinc_task_state.xml
[2025-06-29 11:43:28] -rw------- 1 boinc boinc        95 Jun 29 11:42 pilot_heartbeat.json
[2025-06-29 11:43:28] -rw------- 1 boinc boinc      1025 Jun 29 11:42 memory_monitor_summary.json
[2025-06-29 11:43:28] -rw------- 1 boinc boinc   1574086 Jun 29 11:42 agis_ddmendpoints.agis.ALL.json
[2025-06-29 11:43:28] -rw------- 1 boinc boinc    388722 Jun 29 11:42 log.45399795._000111.job.log.tgz.1
[2025-06-29 11:43:28] -rw------- 1 boinc boinc      7712 Jun 29 11:42 heartbeat.json
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc        28 Jun 29 11:43 wrapper_checkpoint.txt
[2025-06-29 11:43:28] -rw------- 1 boinc boinc       747 Jun 29 11:43 pilotlog.txt
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc      8192 Jun 29 11:43 boinc_mmap_file
[2025-06-29 11:43:28] -rw------- 1 boinc boinc   1807572 Jun 29 11:43 log.45399795._000111.job.log.1
[2025-06-29 11:43:28] -rw------- 1 boinc boinc       357 Jun 29 11:43 output.list
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc       620 Jun 29 11:43 runtime_log
[2025-06-29 11:43:28] -rw------- 1 boinc boinc   2211840 Jun 29 11:43 result.tar.gz
[2025-06-29 11:43:28] -rw------- 1 boinc boinc       657 Jun 29 11:43 xBEMDmeD2p7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbRlKDm7pdLcn.diag
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc      8757 Jun 29 11:43 runtime_log.err
[2025-06-29 11:43:28] -rw-r--r-- 1 boinc boinc     21258 Jun 29 11:43 stderr.txt
[2025-06-29 11:43:28] HITS file was successfully produced:
[2025-06-29 11:43:28] -rw------- 1 boinc boinc 278199145 Jun 29 11:41 shared/HITS.pool.root.1
[2025-06-29 11:43:28]  *** Contents of shared directory: ***
[2025-06-29 11:43:28] total 566348
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc 298955905 Jun 29 06:08 ATLAS.root_0
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc     15095 Jun 29 06:08 start_atlas.sh
[2025-06-29 11:43:28] -rw-r--r-- 2 boinc boinc    542888 Jun 29 06:08 input.tar.gz
[2025-06-29 11:43:28] -rw------- 1 boinc boinc 278199145 Jun 29 11:41 HITS.pool.root.1
[2025-06-29 11:43:28] -rw------- 1 boinc boinc   2211840 Jun 29 11:43 result.tar.gz
11:43:30 (1001031): run_atlas exited; CPU time 79301.521951
11:43:30 (1001031): called boinc_finish(0)

</stderr_txt>
]]>

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