Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:45 (1609312): wrapper (7.7.26015): starting
17:21:45 (1609312): wrapper: running run_atlas (--nthreads 4)
[2025-06-29 17:21:45] Arguments: --nthreads 4
[2025-06-29 17:21:45] Threads: 4
[2025-06-29 17:21:45] Checking for CVMFS
[2025-06-29 17:21:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 17:21:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 17:21:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 17:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 17:21:45] 2.9.2.0 1421140 670 73292 147723 3 55 32087238 36864001 0 130560 0 490374 99.986 29272 775 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-29 17:21:45] CVMFS is ok
[2025-06-29 17:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-29 17:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-29 17:21:45] Further information can be found at the LHC@home message board.
[2025-06-29 17:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 17:21:45] Checking for apptainer binary...
[2025-06-29 17:21:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-29 17:21:45] Running /usr/bin/apptainer --version
[2025-06-29 17:21:45] apptainer version 1.4.1-1.1
[2025-06-29 17:21:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 17:21:45] magicA244a
[2025-06-29 17:21:45] apptainer works
[2025-06-29 17:21:45] Set ATHENA_PROC_NUMBER=4
[2025-06-29 17:21:45] Set ATHENA_CORE_NUMBER=4
[2025-06-29 17:21:45] Starting ATLAS job with PandaID=6712818043
[2025-06-29 17:21:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 18:41:59]  *** The last 200 lines of the pilot log: ***
[2025-06-29 18:41:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-29 18:41:59]  is_altstaged=None
[2025-06-29 18:41:59]  is_tar=False
[2025-06-29 18:41:59]  lfn=log.45399336._000065.job.log.tgz.1
[2025-06-29 18:41:59]  mtime=0
[2025-06-29 18:41:59]  protocol_id=None
[2025-06-29 18:41:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-29 18:41:59]  replicas=None
[2025-06-29 18:41:59]  scope=mc23_13p6TeV
[2025-06-29 18:41:59]  status=None
[2025-06-29 18:41:59]  status_code=0
[2025-06-29 18:41:59]  storage_token=
[2025-06-29 18:41:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6712818043/log.45399336._000065.job.log.tgz.1
[2025-06-29 18:41:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/4a/log.45399336._000065.job.log.tgz.1
[2025-06-29 18:41:59]  workdir=None
[2025-06-29 18:41:59] ]
[2025-06-29 18:41:59] 2025-06-29 16:41:19,987 | INFO     | transferring file log.45399336._000065.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6712818043/log.45399336._000065.job.log.tgz.1 to /local/data/boinc/
[2025-06-29 18:41:59] 2025-06-29 16:41:19,987 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6712818043/log.45399336._000065.job.log.tgz.1 /local/data/boinc/slots/0/log.45399336._0000
[2025-06-29 18:41:59] 2025-06-29 16:41:20,001 | INFO     | adding to output.list: log.45399336._000065.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/4a/log.45399336._000065.job.log.tg
[2025-06-29 18:41:59] 2025-06-29 16:41:20,001 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-29 18:41:59] 2025-06-29 16:41:20,001 | INFO     | summary of transferred files:
[2025-06-29 18:41:59] 2025-06-29 16:41:20,001 | INFO     |  -- lfn=log.45399336._000065.job.log.tgz.1, status_code=0, status=transferred
[2025-06-29 18:41:59] 2025-06-29 16:41:20,001 | INFO     | stage-out finished correctly
[2025-06-29 18:41:59] 2025-06-29 16:41:21,663 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-29 18:41:59] 2025-06-29 16:41:23,564 | INFO     | job 6712818043 has state=finished
[2025-06-29 18:41:59] 2025-06-29 16:41:23,564 | INFO     | preparing for final server update for job 6712818043 in state='finished'
[2025-06-29 18:41:59] 2025-06-29 16:41:23,565 | INFO     | this job has now completed (state=finished)
[2025-06-29 18:41:59] 2025-06-29 16:41:23,565 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-29 18:41:59] 2025-06-29 16:41:23,565 | INFO     | log transfer has been attempted: DONE
[2025-06-29 18:41:59] 2025-06-29 16:41:23,565 | INFO     | job 6712818043 has finished - writing final server update
[2025-06-29 18:41:59] 2025-06-29 16:41:23,565 | INFO     | total number of processed events: 400 (read)
[2025-06-29 18:41:59] 2025-06-29 16:41:23,566 | INFO     | executing command: lscpu
[2025-06-29 18:41:59] 2025-06-29 16:41:23,583 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-29 18:41:59] 2025-06-29 16:41:24,880 | WARNING  | process 1619615 can no longer be monitored (due to stat problems) - aborting
[2025-06-29 18:41:59] 2025-06-29 16:41:24,880 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6712818043/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 18:41:59] 2025-06-29 16:41:24,927 | INFO     | number of running child processes to parent process 1619615: 1
[2025-06-29 18:41:59] 2025-06-29 16:41:24,927 | INFO     | maximum number of monitored processes: 6
[2025-06-29 18:41:59] 2025-06-29 16:41:26,897 | INFO     | PID=1613014 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-29 18:41:59] 2025-06-29 16:41:27,205 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-29 18:41:59] 2025-06-29 16:41:27,206 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3617.6937499999995
[2025-06-29 18:41:59] 2025-06-29 16:41:27,207 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6712818043/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | INFO     | extracted standard info from prmon json
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | INFO     | extracted standard memory fields from prmon json
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | INFO     | fitting pss+swap vs Time
[2025-06-29 18:41:59] 2025-06-29 16:41:27,208 | INFO     | sum of square deviations: 110960220.0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | sum of deviations: -10258335962.000002
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | mean x: 1751212971.0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | mean y: 2589310.971830986
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | -- intersect: 161903232600.34317
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | intersect: 161903232600.34317
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | chi2: 0.037970239526036745
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | -- intersect: 161903232600.34317
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | current memory leak: -92.45 B/s (using 71 data points, chi2=0.04)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | could have reported an average CPU frequency of 3818 MHz (6 samples)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | ..............................
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . Timing measurements:
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . get job = 0 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . initial setup = 1 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . payload setup = 3 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . stage-in = 0 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . payload execution = 4748 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . stage-out = 0 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | . log creation = 0 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,209 | INFO     | ..............................
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | 
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | job summary report
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | --------------------------------------------------
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | PanDA job id: 6712818043
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | task id: 45399336
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | errors: (none)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | pilot state: finished 
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | transexitcode: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | exeerrorcode: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | exeerrordiag: 
[2025-06-29 18:41:59] 2025-06-29 16:41:27,239 | INFO     | exitcode: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | exitmsg: OK
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | cpuconsumptiontime: 18124 s
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | nevents: 400
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | neventsw: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | pid: 1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | pgrp: 1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | corecount: 4
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | event service: False
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | sizes: {0: 2366682, 2: 2366944, 10: 2366972, 4755: 2393354, 4756: 2402358, 4757: 2402414, 4763: 2402736}
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | --------------------------------------------------
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | 
[2025-06-29 18:41:59] 2025-06-29 16:41:27,240 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | job 6712818043 has completed (purged errors)
[2025-06-29 18:41:59] 2025-06-29 16:41:27,254 | INFO     | overall cleanup function is called
[2025-06-29 18:41:59] 2025-06-29 16:41:28,261 | INFO     | --- collectZombieJob: --- 10, [1619615]
[2025-06-29 18:41:59] 2025-06-29 16:41:28,261 | INFO     | zombie collector waiting for pid 1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:28,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 18:41:59] 2025-06-29 16:41:28,261 | INFO     | collected zombie processes
[2025-06-29 18:41:59] 2025-06-29 16:41:28,261 | INFO     | will attempt to kill all subprocesses of pid=1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:28,303 | INFO     | process IDs to be killed: [1619615] (in reverse order)
[2025-06-29 18:41:59] 2025-06-29 16:41:28,329 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 18:41:59] 2025-06-29 16:41:28,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 18:41:59] 2025-06-29 16:41:28,330 | INFO     | did not find any defunct processes belonging to 1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:28,331 | INFO     | did not find any defunct processes belonging to 1619615
[2025-06-29 18:41:59] 2025-06-29 16:41:28,331 | INFO     | ready for new job
[2025-06-29 18:41:59] 2025-06-29 16:41:28,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 18:41:59] 2025-06-29 16:41:28,332 | INFO     | ***************************************
[2025-06-29 18:41:59] 2025-06-29 16:41:28,332 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 18:41:59] 2025-06-29 16:41:28,332 | INFO     | ***************************************
[2025-06-29 18:41:59] 2025-06-29 16:41:28,332 | INFO     | 
[2025-06-29 18:41:59] 2025-06-29 16:41:28,332 | INFO     | architecture information:
[2025-06-29 18:41:59] 2025-06-29 16:41:28,333 | INFO     | executing command: cat /etc/os-release
[2025-06-29 18:41:59] 2025-06-29 16:41:28,342 | INFO     | cat /etc/os-release:
[2025-06-29 18:41:59] NAME="CentOS Linux"
[2025-06-29 18:41:59] VERSION="7 (Core)"
[2025-06-29 18:41:59] ID="centos"
[2025-06-29 18:41:59] ID_LIKE="rhel fedora"
[2025-06-29 18:41:59] VERSION_ID="7"
[2025-06-29 18:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 18:41:59] ANSI_COLOR="0;31"
[2025-06-29 18:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 18:41:59] HOME_URL="https://www.centos.org/"
[2025-06-29 18:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 18:41:59] 
[2025-06-29 18:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 18:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 18:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 18:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 18:41:59] 
[2025-06-29 18:41:59] 2025-06-29 16:41:28,342 | INFO     | ***************************************
[2025-06-29 18:41:59] 2025-06-29 16:41:28,845 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | INFO     | sufficient remaining disk space (324211310592 B)
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | INFO     | update_server=False
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | INFO     | aborting loop
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 18:41:59] 2025-06-29 16:41:28,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 18:41:59] 2025-06-29 16:41:29,725 | INFO     | all data control threads have been joined
[2025-06-29 18:41:59] 2025-06-29 16:41:29,865 | INFO     | [job] retrieve thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:29,865 | INFO     | [job] job monitor thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:29,865 | INFO     | [job] queue monitor thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,139 | INFO     | all job control threads have been joined
[2025-06-29 18:41:59] 2025-06-29 16:41:30,175 | INFO     | [data] copytool_in thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,193 | INFO     | all payload control threads have been joined
[2025-06-29 18:41:59] 2025-06-29 16:41:30,449 | INFO     | [job] validate thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,515 | INFO     | [payload] failed_post thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,559 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,581 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,653 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,731 | INFO     | [data] control thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:30,865 | INFO     | [data] copytool_out thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:31,145 | INFO     | [job] control thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:31,198 | INFO     | [payload] control thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:31,382 | INFO     | [payload] validate_post thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:32,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 18:41:59] 2025-06-29 16:41:36,214 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 18:41:59] 2025-06-29 16:41:38,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140653811865408)>', '<ExcThread(monitor, started 140653149263616)>']
[2025-06-29 18:41:59] 2025-06-29 16:41:43,032 | INFO     | all workflow threads have been joined
[2025-06-29 18:41:59] 2025-06-29 16:41:43,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 18:41:59] 2025-06-29 16:41:43,032 | INFO     | traces error code: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:43,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | INFO     | PID=1613014 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 18:41:59] 2025-06-29 16:41:59,042 | INFO     | [monitor] control thread has ended
[2025-06-29 18:41:59] 2025-06-29 16:41:59,093 [wrapper] ==== pilot stdout END ====
[2025-06-29 18:41:59] 2025-06-29 16:41:59,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 18:41:59] 2025-06-29 16:41:59,098 [wrapper] pilotpid: 1613014
[2025-06-29 18:41:59] 2025-06-29 16:41:59,100 [wrapper] Pilot exit status: 0
[2025-06-29 18:41:59] 2025-06-29 16:41:59,108 [wrapper] pandaids: 6712818043
[2025-06-29 18:41:59] 2025-06-29 16:41:59,124 [wrapper] cleanup supervisor_pilot 1632002 1613015
[2025-06-29 18:41:59] 2025-06-29 16:41:59,127 [wrapper] Test setup, not cleaning
[2025-06-29 18:41:59] 2025-06-29 16:41:59,129 [wrapper] apfmon messages muted
[2025-06-29 18:41:59] 2025-06-29 16:41:59,132 [wrapper] ==== wrapper stdout END ====
[2025-06-29 18:41:59] 2025-06-29 16:41:59,134 [wrapper] ==== wrapper stderr END ====
[2025-06-29 18:41:59]  *** Error codes and diagnostics ***
[2025-06-29 18:41:59]     "exeErrorCode": 0,
[2025-06-29 18:41:59]     "exeErrorDiag": "",
[2025-06-29 18:41:59]     "pilotErrorCode": 0,
[2025-06-29 18:41:59]     "pilotErrorDiag": "",
[2025-06-29 18:41:59]  *** Listing of results directory ***
[2025-06-29 18:41:59] total 519976
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc    530466 Jun 29 10:00 pilot3.tar.gz
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc      5112 Jun 29 10:05 queuedata.json
[2025-06-29 18:41:59] -rwx------ 1 boinc boinc     36245 Jun 29 10:05 runpilot2-wrapper.sh
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc       100 Jun 29 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 18:41:59] -rwxr-xr-x 1 boinc boinc      7986 Jun 29 17:21 run_atlas
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc       105 Jun 29 17:21 job.xml
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc 289757684 Jun 29 17:21 EVNT.45399334._000003.pool.root.1
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc    542891 Jun 29 17:21 input.tar.gz
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc     15095 Jun 29 17:21 start_atlas.sh
[2025-06-29 18:41:59] drwxrwx--x 2 boinc boinc      4096 Jun 29 17:21 shared
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc         0 Jun 29 17:21 boinc_setup_complete
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc      6515 Jun 29 17:21 init_data.xml
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc         0 Jun 29 17:21 boinc_lockfile
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc      2625 Jun 29 17:21 pandaJob.out
[2025-06-29 18:41:59] -rw------- 1 boinc boinc    970692 Jun 29 17:21 agis_schedconf.cvmfs.json
[2025-06-29 18:41:59] -rw------- 1 boinc boinc   1574086 Jun 29 17:21 agis_ddmendpoints.agis.ALL.json
[2025-06-29 18:41:59] drwx------ 4 boinc boinc      4096 Jun 29 17:21 pilot3
[2025-06-29 18:41:59] -rw------- 1 boinc boinc 237417100 Jun 29 18:40 HITS.45399336._000065.pool.root.1
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc       529 Jun 29 18:41 boinc_task_state.xml
[2025-06-29 18:41:59] -rw------- 1 boinc boinc        95 Jun 29 18:41 pilot_heartbeat.json
[2025-06-29 18:41:59] -rw------- 1 boinc boinc      1018 Jun 29 18:41 memory_monitor_summary.json
[2025-06-29 18:41:59] -rw------- 1 boinc boinc    245359 Jun 29 18:41 log.45399336._000065.job.log.tgz.1
[2025-06-29 18:41:59] -rw------- 1 boinc boinc      7749 Jun 29 18:41 heartbeat.json
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc        27 Jun 29 18:41 wrapper_checkpoint.txt
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc      8192 Jun 29 18:41 boinc_mmap_file
[2025-06-29 18:41:59] -rw------- 1 boinc boinc       747 Jun 29 18:41 pilotlog.txt
[2025-06-29 18:41:59] -rw------- 1 boinc boinc    467830 Jun 29 18:41 log.45399336._000065.job.log.1
[2025-06-29 18:41:59] -rw------- 1 boinc boinc       357 Jun 29 18:41 output.list
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc       620 Jun 29 18:41 runtime_log
[2025-06-29 18:41:59] -rw------- 1 boinc boinc    737280 Jun 29 18:41 result.tar.gz
[2025-06-29 18:41:59] -rw------- 1 boinc boinc       662 Jun 29 18:41 sOQNDmTD2p7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2QlKDm9b5oNn.diag
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc      8754 Jun 29 18:41 runtime_log.err
[2025-06-29 18:41:59] -rw-r--r-- 1 boinc boinc     21577 Jun 29 18:41 stderr.txt
[2025-06-29 18:41:59] HITS file was successfully produced:
[2025-06-29 18:41:59] -rw------- 1 boinc boinc 237417100 Jun 29 18:40 shared/HITS.pool.root.1
[2025-06-29 18:41:59]  *** Contents of shared directory: ***
[2025-06-29 18:41:59] total 516100
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc 289757684 Jun 29 17:21 ATLAS.root_0
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc    542891 Jun 29 17:21 input.tar.gz
[2025-06-29 18:41:59] -rw-r--r-- 2 boinc boinc     15095 Jun 29 17:21 start_atlas.sh
[2025-06-29 18:41:59] -rw------- 1 boinc boinc 237417100 Jun 29 18:40 HITS.pool.root.1
[2025-06-29 18:41:59] -rw------- 1 boinc boinc    737280 Jun 29 18:41 result.tar.gz
18:42:00 (1609312): run_atlas exited; CPU time 18139.023979
18:42:00 (1609312): called boinc_finish(0)

</stderr_txt>
]]>

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