Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:06 (17959): wrapper (7.7.26015): starting
14:09:06 (17959): wrapper: running run_atlas (--nthreads 8)
[2025-06-29 14:09:06] Arguments: --nthreads 8
[2025-06-29 14:09:06] Threads: 8
[2025-06-29 14:09:06] Checking for CVMFS
[2025-06-29 14:09:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 14:09:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 14:09:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 14:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 14:09:07] 2.11.2.0 15803 6568 80068 147717 3 63 24994016 25165825 414 130560 0 7236187 99.949 958357 5969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-29 14:09:07] CVMFS is ok
[2025-06-29 14:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 14:09:07] Checking for apptainer binary...
[2025-06-29 14:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-29 14:09:07] Running /usr/bin/apptainer --version
[2025-06-29 14:09:07] apptainer version 1.3.2-1.el7
[2025-06-29 14:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 14:09:08] cg-vwn408.simple-grid.lan
[2025-06-29 14:09:08] apptainer works
[2025-06-29 14:09:08] Set ATHENA_PROC_NUMBER=8
[2025-06-29 14:09:08] Set ATHENA_CORE_NUMBER=8
[2025-06-29 14:09:08] Starting ATLAS job with PandaID=6712786668
[2025-06-29 14:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 16:41:59]  *** The last 200 lines of the pilot log: ***
[2025-06-29 16:41:59] 2025-06-29 14:41:27,806 | INFO     | intersect: -40991358719.667656
[2025-06-29 16:41:59] 2025-06-29 14:41:27,806 | INFO     | chi2: 1.4683257830199776
[2025-06-29 16:41:59] 2025-06-29 14:41:27,807 | INFO     | sum of square deviations: 925859220.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | sum of deviations: 23226542786.5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | mean x: 1751203351.5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | mean y: 2514494.6319444445
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | -- intersect: -43929001974.44524
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | intersect: -43929001974.44524
[2025-06-29 16:41:59] 2025-06-29 14:41:27,808 | INFO     | chi2: 1.4691300490089203
[2025-06-29 16:41:59] 2025-06-29 14:41:27,809 | INFO     | current chi2=1.4691300490089203 (change=-0.054774355816902084 %)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,809 | INFO     | right removable region: 143
[2025-06-29 16:41:59] 2025-06-29 14:41:27,809 | INFO     | sum of square deviations: 925859220.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,810 | INFO     | sum of deviations: 1375619753.4999998
[2025-06-29 16:41:59] 2025-06-29 14:41:27,810 | INFO     | mean x: 1751203656.5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,810 | INFO     | mean y: 2549733.3541666665
[2025-06-29 16:41:59] 2025-06-29 14:41:27,810 | INFO     | -- intersect: -2599347283.2169147
[2025-06-29 16:41:59] 2025-06-29 14:41:27,810 | INFO     | intersect: -2599347283.2169147
[2025-06-29 16:41:59] 2025-06-29 14:41:27,811 | INFO     | chi2: 0.04386438093774042
[2025-06-29 16:41:59] 2025-06-29 14:41:27,811 | INFO     | current chi2=0.04386438093774042 (change=97.01262611846792 %)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,811 | INFO     | sum of square deviations: 832722590.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,812 | INFO     | sum of deviations: -2346657800.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,812 | INFO     | mean x: 1751203809.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,812 | INFO     | mean y: 2555813.1366906473
[2025-06-29 16:41:59] 2025-06-29 14:41:27,813 | INFO     | -- intersect: 4937543919.775614
[2025-06-29 16:41:59] 2025-06-29 14:41:27,813 | INFO     | intersect: 4937543919.775614
[2025-06-29 16:41:59] 2025-06-29 14:41:27,813 | INFO     | chi2: 0.006425016181705496
[2025-06-29 16:41:59] 2025-06-29 14:41:27,813 | INFO     | current chi2=0.006425016181705496 (change=85.352543352145 %)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,813 | INFO     | sum of square deviations: 746051197.5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,814 | INFO     | sum of deviations: -3095208777.4999995
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | mean x: 1751203961.5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | mean y: 2557121.2014925373
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | -- intersect: 7267932327.341513
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | intersect: 7267932327.341513
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | chi2: 0.004363481983180419
[2025-06-29 16:41:59] 2025-06-29 14:41:27,815 | INFO     | current chi2=0.004363481983180419 (change=32.08605457516296 %)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,816 | INFO     | sum of square deviations: 665612480.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,817 | INFO     | sum of deviations: -3309913619.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,817 | INFO     | mean x: 1751204114.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,817 | INFO     | mean y: 2557524.1550387596
[2025-06-29 16:41:59] 2025-06-29 14:41:27,817 | INFO     | -- intersect: 8710829259.951563
[2025-06-29 16:41:59] 2025-06-29 14:41:27,817 | INFO     | intersect: 8710829259.951563
[2025-06-29 16:41:59] 2025-06-29 14:41:27,818 | INFO     | chi2: 0.003702432500595476
[2025-06-29 16:41:59] 2025-06-29 14:41:27,818 | INFO     | current chi2=0.003702432500595476 (change=15.149586617592096 %)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,818 | INFO     | left removable region: 40
[2025-06-29 16:41:59] 2025-06-29 14:41:27,818 | INFO     | sum of square deviations: 338804492.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,819 | INFO     | sum of deviations: -2196027693.999999
[2025-06-29 16:41:59] 2025-06-29 14:41:27,819 | INFO     | mean x: 1751204541.0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,819 | INFO     | mean y: 2555368.2718446604
[2025-06-29 16:41:59] 2025-06-29 14:41:27,819 | INFO     | -- intersect: 11353330699.475412
[2025-06-29 16:41:59] 2025-06-29 14:41:27,819 | INFO     | intersect: 11353330699.475412
[2025-06-29 16:41:59] 2025-06-29 14:41:27,820 | INFO     | chi2: 0.0032206182703908696
[2025-06-29 16:41:59] 2025-06-29 14:41:27,820 | INFO     | -- intersect: 11353330699.475412
[2025-06-29 16:41:59] 2025-06-29 14:41:27,820 | INFO     | current memory leak: -6.48 B/s (using 103 data points, chi2=0.00)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,820 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | ..............................
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . Timing measurements:
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . get job = 0 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . initial setup = 1 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . payload setup = 8 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . stage-in = 0 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . payload execution = 9093 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . stage-out = 0 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,821 | INFO     | . log creation = 0 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,822 | INFO     | ..............................
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | 
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | job summary report
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | --------------------------------------------------
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | PanDA job id: 6712786668
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | task id: 45399407
[2025-06-29 16:41:59] 2025-06-29 14:41:27,934 | INFO     | errors: (none)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | pilot state: finished 
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | transexitcode: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | exeerrorcode: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | exeerrordiag: 
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | exitcode: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | exitmsg: OK
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | cpuconsumptiontime: 59760 s
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | nevents: 400
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | neventsw: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | pid: 28124
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | pgrp: 28124
[2025-06-29 16:41:59] 2025-06-29 14:41:27,935 | INFO     | corecount: 8
[2025-06-29 16:41:59] 2025-06-29 14:41:27,936 | INFO     | event service: False
[2025-06-29 16:41:59] 2025-06-29 14:41:27,936 | INFO     | sizes: {0: 2366661, 1: 2366661, 5: 2366951, 11: 2367007, 9106: 2394897, 9107: 2403895, 9108: 2404079, 9113: 2404273}
[2025-06-29 16:41:59] 2025-06-29 14:41:27,936 | INFO     | --------------------------------------------------
[2025-06-29 16:41:59] 2025-06-29 14:41:27,936 | INFO     | 
[2025-06-29 16:41:59] 2025-06-29 14:41:27,936 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-29 16:41:59] 2025-06-29 14:41:27,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,956 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,956 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,956 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 16:41:59] 2025-06-29 14:41:27,958 | INFO     | job 6712786668 has completed (purged errors)
[2025-06-29 16:41:59] 2025-06-29 14:41:27,958 | INFO     | overall cleanup function is called
[2025-06-29 16:41:59] 2025-06-29 14:41:28,966 | INFO     | --- collectZombieJob: --- 10, [28124]
[2025-06-29 16:41:59] 2025-06-29 14:41:28,966 | INFO     | zombie collector waiting for pid 28124
[2025-06-29 16:41:59] 2025-06-29 14:41:28,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 16:41:59] 2025-06-29 14:41:28,966 | INFO     | collected zombie processes
[2025-06-29 16:41:59] 2025-06-29 14:41:28,966 | INFO     | will attempt to kill all subprocesses of pid=28124
[2025-06-29 16:41:59] 2025-06-29 14:41:29,020 | INFO     | process IDs to be killed: [28124] (in reverse order)
[2025-06-29 16:41:59] 2025-06-29 14:41:29,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 16:41:59] 2025-06-29 14:41:29,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 16:41:59] 2025-06-29 14:41:29,066 | INFO     | did not find any defunct processes belonging to 28124
[2025-06-29 16:41:59] 2025-06-29 14:41:29,068 | INFO     | did not find any defunct processes belonging to 28124
[2025-06-29 16:41:59] 2025-06-29 14:41:29,068 | INFO     | ready for new job
[2025-06-29 16:41:59] 2025-06-29 14:41:29,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 16:41:59] 2025-06-29 14:41:29,069 | INFO     | ***************************************
[2025-06-29 16:41:59] 2025-06-29 14:41:29,069 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 16:41:59] 2025-06-29 14:41:29,069 | INFO     | ***************************************
[2025-06-29 16:41:59] 2025-06-29 14:41:29,069 | INFO     | 
[2025-06-29 16:41:59] 2025-06-29 14:41:29,070 | INFO     | pilot is running in a VM
[2025-06-29 16:41:59] 2025-06-29 14:41:29,070 | INFO     | architecture information:
[2025-06-29 16:41:59] 2025-06-29 14:41:29,071 | INFO     | executing command: cat /etc/os-release
[2025-06-29 16:41:59] 2025-06-29 14:41:29,086 | INFO     | cat /etc/os-release:
[2025-06-29 16:41:59] NAME="CentOS Linux"
[2025-06-29 16:41:59] VERSION="7 (Core)"
[2025-06-29 16:41:59] ID="centos"
[2025-06-29 16:41:59] ID_LIKE="rhel fedora"
[2025-06-29 16:41:59] VERSION_ID="7"
[2025-06-29 16:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 16:41:59] ANSI_COLOR="0;31"
[2025-06-29 16:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 16:41:59] HOME_URL="https://www.centos.org/"
[2025-06-29 16:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 16:41:59] 
[2025-06-29 16:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 16:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 16:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 16:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 16:41:59] 
[2025-06-29 16:41:59] 2025-06-29 14:41:29,086 | INFO     | ***************************************
[2025-06-29 16:41:59] 2025-06-29 14:41:29,589 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-29 16:41:59] 2025-06-29 14:41:29,606 | INFO     | sufficient remaining disk space (495053701120 B)
[2025-06-29 16:41:59] 2025-06-29 14:41:29,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 16:41:59] 2025-06-29 14:41:29,607 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 16:41:59] 2025-06-29 14:41:29,607 | INFO     | update_server=False
[2025-06-29 16:41:59] 2025-06-29 14:41:29,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 16:41:59] 2025-06-29 14:41:29,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 16:41:59] 2025-06-29 14:41:29,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 16:41:59] 2025-06-29 14:41:29,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 16:41:59] 2025-06-29 14:41:29,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 16:41:59] 2025-06-29 14:41:29,609 | INFO     | aborting loop
[2025-06-29 16:41:59] 2025-06-29 14:41:29,833 | INFO     | all data control threads have been joined
[2025-06-29 16:41:59] 2025-06-29 14:41:30,029 | INFO     | all job control threads have been joined
[2025-06-29 16:41:59] 2025-06-29 14:41:30,537 | INFO     | all payload control threads have been joined
[2025-06-29 16:41:59] 2025-06-29 14:41:30,613 | INFO     | [job] retrieve thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,614 | INFO     | [job] job monitor thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,615 | INFO     | [job] queue monitor thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,624 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,684 | INFO     | [job] validate thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,839 | INFO     | [data] control thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:30,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,034 | INFO     | [job] control thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,090 | INFO     | [payload] validate_post thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,489 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,543 | INFO     | [payload] control thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,613 | INFO     | [data] copytool_out thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,628 | INFO     | [payload] failed_post thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:31,897 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:32,048 | INFO     | [data] copytool_in thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:33,615 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 16:41:59] 2025-06-29 14:41:34,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748830132032)>', '<ExcThread(monitor, started 139748521776896)>']
[2025-06-29 16:41:59] 2025-06-29 14:41:39,931 | INFO     | all workflow threads have been joined
[2025-06-29 16:41:59] 2025-06-29 14:41:39,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 16:41:59] 2025-06-29 14:41:39,932 | INFO     | traces error code: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:39,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 16:41:59] 2025-06-29 14:41:59,210 | INFO     | PID=21618 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | INFO     | .. there are 2 such processes running
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | CRITICAL | thread 'MainThread' is not alive
[2025-06-29 16:41:59] 2025-06-29 14:41:59,211 | INFO     | [monitor] control thread has ended
[2025-06-29 16:41:59] 2025-06-29 14:41:59,332 [wrapper] ==== pilot stdout END ====
[2025-06-29 16:41:59] 2025-06-29 14:41:59,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 16:41:59] 2025-06-29 14:41:59,340 [wrapper] pilotpid: 21618
[2025-06-29 16:41:59] 2025-06-29 14:41:59,345 [wrapper] Pilot exit status: 0
[2025-06-29 16:41:59] 2025-06-29 14:41:59,357 [wrapper] pandaids: 6712786668
[2025-06-29 16:41:59] 2025-06-29 14:41:59,388 [wrapper] cleanup supervisor_pilot 12355 21619
[2025-06-29 16:41:59] 2025-06-29 14:41:59,393 [wrapper] Test setup, not cleaning
[2025-06-29 16:41:59] 2025-06-29 14:41:59,399 [wrapper] apfmon messages muted
[2025-06-29 16:41:59] 2025-06-29 14:41:59,402 [wrapper] ==== wrapper stdout END ====
[2025-06-29 16:41:59] 2025-06-29 14:41:59,405 [wrapper] ==== wrapper stderr END ====
[2025-06-29 16:41:59]  *** Error codes and diagnostics ***
[2025-06-29 16:41:59]     "exeErrorCode": 0,
[2025-06-29 16:41:59]     "exeErrorDiag": "",
[2025-06-29 16:41:59]     "pilotErrorCode": 0,
[2025-06-29 16:41:59]     "pilotErrorDiag": "",
[2025-06-29 16:41:59]  *** Listing of results directory ***
[2025-06-29 16:41:59] total 520024
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc    530466 Jun 29 08:22 pilot3.tar.gz
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc      5112 Jun 29 08:40 queuedata.json
[2025-06-29 16:41:59] -rwx------. 1 boinc boinc     36245 Jun 29 08:40 runpilot2-wrapper.sh
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc       100 Jun 29 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 16:41:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun 29 14:09 run_atlas
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc       105 Jun 29 14:09 job.xml
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc 283689276 Jun 29 14:09 EVNT.45399405._000003.pool.root.1
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc    542878 Jun 29 14:09 input.tar.gz
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc      6391 Jun 29 14:09 init_data.xml
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc     15095 Jun 29 14:09 start_atlas.sh
[2025-06-29 16:41:59] drwxrwx--x. 2 boinc boinc        68 Jun 29 14:09 shared
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc         0 Jun 29 14:09 boinc_lockfile
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc      2607 Jun 29 14:09 pandaJob.out
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc    970684 Jun 29 14:09 agis_schedconf.cvmfs.json
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc   1574086 Jun 29 14:09 agis_ddmendpoints.agis.ALL.json
[2025-06-29 16:41:59] drwx------. 4 boinc boinc      4096 Jun 29 14:09 pilot3
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc 242648199 Jun 29 16:40 HITS.45399407._000071.pool.root.1
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc        95 Jun 29 16:41 pilot_heartbeat.json
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc       530 Jun 29 16:41 boinc_task_state.xml
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc      1017 Jun 29 16:41 memory_monitor_summary.json
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc    350915 Jun 29 16:41 log.45399407._000071.job.log.tgz.1
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc      7761 Jun 29 16:41 heartbeat.json
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc      8192 Jun 29 16:41 boinc_mmap_file
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc        27 Jun 29 16:41 wrapper_checkpoint.txt
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc       890 Jun 29 16:41 pilotlog.txt
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc    814383 Jun 29 16:41 log.45399407._000071.job.log.1
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc       357 Jun 29 16:41 output.list
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc       620 Jun 29 16:41 runtime_log
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc   1187840 Jun 29 16:41 result.tar.gz
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc      8659 Jun 29 16:41 runtime_log.err
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc       652 Jun 29 16:41 NdvLDmgt0p7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3LlKDmefN6Bo.diag
[2025-06-29 16:41:59] -rw-r--r--. 1 boinc boinc     20570 Jun 29 16:41 stderr.txt
[2025-06-29 16:41:59] HITS file was successfully produced:
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc 242648199 Jun 29 16:40 shared/HITS.pool.root.1
[2025-06-29 16:41:59]  *** Contents of shared directory: ***
[2025-06-29 16:41:59] total 515716
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc 283689276 Jun 29 14:09 ATLAS.root_0
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc    542878 Jun 29 14:09 input.tar.gz
[2025-06-29 16:41:59] -rw-r--r--. 2 boinc boinc     15095 Jun 29 14:09 start_atlas.sh
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc 242648199 Jun 29 16:40 HITS.pool.root.1
[2025-06-29 16:41:59] -rw-------. 1 boinc boinc   1187840 Jun 29 16:41 result.tar.gz
16:42:01 (17959): run_atlas exited; CPU time 59815.812981
16:42:01 (17959): called boinc_finish(0)

</stderr_txt>
]]>

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