Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:42 (1556406): wrapper (7.7.26015): starting
14:19:42 (1556406): wrapper: running run_atlas (--nthreads 4)
[2025-06-29 14:19:42] Arguments: --nthreads 4
[2025-06-29 14:19:42] Threads: 4
[2025-06-29 14:19:42] Checking for CVMFS
[2025-06-29 14:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 14:19:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 14:19:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 14:19:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 14:19:42] 2.9.2.0 1421140 488 68288 147718 1 55 32069544 36864000 0 130560 0 351154 99.984 22634 606 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-29 14:19:42] CVMFS is ok
[2025-06-29 14:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-29 14:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-29 14:19:42] Further information can be found at the LHC@home message board.
[2025-06-29 14:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 14:19:42] Checking for apptainer binary...
[2025-06-29 14:19:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-29 14:19:42] Running /usr/bin/apptainer --version
[2025-06-29 14:19:42] apptainer version 1.4.1-1.1
[2025-06-29 14:19:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 14:19:42] magicA244a
[2025-06-29 14:19:42] apptainer works
[2025-06-29 14:19:42] Set ATHENA_PROC_NUMBER=4
[2025-06-29 14:19:42] Set ATHENA_CORE_NUMBER=4
[2025-06-29 14:19:42] Starting ATLAS job with PandaID=6712783876
[2025-06-29 14:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 15:38:11]  *** The last 200 lines of the pilot log: ***
[2025-06-29 15:38:11]  lfn=log.45399988._000002.job.log.tgz.1
[2025-06-29 15:38:11]  mtime=0
[2025-06-29 15:38:11]  protocol_id=None
[2025-06-29 15:38:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-29 15:38:11]  replicas=None
[2025-06-29 15:38:11]  scope=mc23_13p6TeV
[2025-06-29 15:38:11]  status=None
[2025-06-29 15:38:11]  status_code=0
[2025-06-29 15:38:11]  storage_token=
[2025-06-29 15:38:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6712783876/log.45399988._000002.job.log.tgz.1
[2025-06-29 15:38:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/3c/log.45399988._000002.job.log.tgz.1
[2025-06-29 15:38:11]  workdir=None
[2025-06-29 15:38:11] ]
[2025-06-29 15:38:11] 2025-06-29 13:37:32,627 | INFO     | transferring file log.45399988._000002.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6712783876/log.45399988._000002.job.log.tgz.1 to /local/data/boinc/
[2025-06-29 15:38:11] 2025-06-29 13:37:32,627 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6712783876/log.45399988._000002.job.log.tgz.1 /local/data/boinc/slots/0/log.45399988._0000
[2025-06-29 15:38:11] 2025-06-29 13:37:32,640 | INFO     | adding to output.list: log.45399988._000002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/3c/log.45399988._000002.job.log.tg
[2025-06-29 15:38:11] 2025-06-29 13:37:32,641 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-29 15:38:11] 2025-06-29 13:37:32,641 | INFO     | summary of transferred files:
[2025-06-29 15:38:11] 2025-06-29 13:37:32,641 | INFO     |  -- lfn=log.45399988._000002.job.log.tgz.1, status_code=0, status=transferred
[2025-06-29 15:38:11] 2025-06-29 13:37:32,641 | INFO     | stage-out finished correctly
[2025-06-29 15:38:11] 2025-06-29 13:37:33,333 | INFO     | PID=1560116 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-29 15:38:11] 2025-06-29 13:37:35,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-29 15:38:11] 2025-06-29 13:37:36,509 | INFO     | job 6712783876 has state=finished
[2025-06-29 15:38:11] 2025-06-29 13:37:36,509 | INFO     | preparing for final server update for job 6712783876 in state='finished'
[2025-06-29 15:38:11] 2025-06-29 13:37:36,509 | INFO     | this job has now completed (state=finished)
[2025-06-29 15:38:11] 2025-06-29 13:37:36,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-29 15:38:11] 2025-06-29 13:37:36,510 | INFO     | log transfer has been attempted: DONE
[2025-06-29 15:38:11] 2025-06-29 13:37:36,510 | INFO     | job 6712783876 has finished - writing final server update
[2025-06-29 15:38:11] 2025-06-29 13:37:36,510 | INFO     | total number of processed events: 400 (read)
[2025-06-29 15:38:11] 2025-06-29 13:37:36,510 | INFO     | executing command: lscpu
[2025-06-29 15:38:11] 2025-06-29 13:37:36,527 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-29 15:38:11] 2025-06-29 13:37:37,409 | WARNING  | process 1566715 can no longer be monitored (due to stat problems) - aborting
[2025-06-29 15:38:11] 2025-06-29 13:37:37,409 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6712783876/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 15:38:11] 2025-06-29 13:37:37,460 | INFO     | number of running child processes to parent process 1566715: 1
[2025-06-29 15:38:11] 2025-06-29 13:37:37,460 | INFO     | maximum number of monitored processes: 6
[2025-06-29 15:38:11] 2025-06-29 13:37:39,963 | INFO     | monitor loop #360: job 0:6712783876 is in state 'finished'
[2025-06-29 15:38:11] 2025-06-29 13:37:39,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-29 15:38:11] 2025-06-29 13:37:40,128 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3520.7110624999996
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6712783876/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | INFO     | extracted standard info from prmon json
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | INFO     | extracted standard memory fields from prmon json
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 15:38:11] 2025-06-29 13:37:40,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | fitting pss+swap vs Time
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | sum of square deviations: 106336877.5
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | sum of deviations: -9203968469.0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | mean x: 1751202017.5
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | mean y: 2622025.2
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | -- intersect: 151577583890.32706
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | intersect: 151577583890.32706
[2025-06-29 15:38:11] 2025-06-29 13:37:40,130 | INFO     | chi2: 0.04222848148309082
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | -- intersect: 151577583890.32706
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | current memory leak: -86.55 B/s (using 70 data points, chi2=0.04)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | could have reported an average CPU frequency of 3846 MHz (6 samples)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | ..............................
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . Timing measurements:
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . get job = 0 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . initial setup = 1 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . payload setup = 3 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . stage-in = 0 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . payload execution = 4644 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . stage-out = 0 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | . log creation = 0 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,131 | INFO     | ..............................
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | 
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | job summary report
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | --------------------------------------------------
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | PanDA job id: 6712783876
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | task id: 45399988
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | errors: (none)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | pilot state: finished 
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | transexitcode: 0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | exeerrorcode: 0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | exeerrordiag: 
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | exitcode: 0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | exitmsg: OK
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | cpuconsumptiontime: 17658 s
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | nevents: 400
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | neventsw: 0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | pid: 1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:40,161 | INFO     | pgrp: 1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | corecount: 4
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | event service: False
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | sizes: {0: 2366650, 2: 2366912, 10: 2366940, 4651: 2402291, 4654: 2402291, 4659: 2402485}
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | --------------------------------------------------
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | 
[2025-06-29 15:38:11] 2025-06-29 13:37:40,162 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | job 6712783876 has completed (purged errors)
[2025-06-29 15:38:11] 2025-06-29 13:37:40,175 | INFO     | overall cleanup function is called
[2025-06-29 15:38:11] 2025-06-29 13:37:41,180 | INFO     | --- collectZombieJob: --- 10, [1566715]
[2025-06-29 15:38:11] 2025-06-29 13:37:41,180 | INFO     | zombie collector waiting for pid 1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:41,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 15:38:11] 2025-06-29 13:37:41,181 | INFO     | collected zombie processes
[2025-06-29 15:38:11] 2025-06-29 13:37:41,181 | INFO     | will attempt to kill all subprocesses of pid=1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:41,223 | INFO     | process IDs to be killed: [1566715] (in reverse order)
[2025-06-29 15:38:11] 2025-06-29 13:37:41,249 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 15:38:11] 2025-06-29 13:37:41,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 15:38:11] 2025-06-29 13:37:41,250 | INFO     | did not find any defunct processes belonging to 1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:41,251 | INFO     | did not find any defunct processes belonging to 1566715
[2025-06-29 15:38:11] 2025-06-29 13:37:41,251 | INFO     | ready for new job
[2025-06-29 15:38:11] 2025-06-29 13:37:41,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 15:38:11] 2025-06-29 13:37:41,252 | INFO     | ***************************************
[2025-06-29 15:38:11] 2025-06-29 13:37:41,252 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 15:38:11] 2025-06-29 13:37:41,252 | INFO     | ***************************************
[2025-06-29 15:38:11] 2025-06-29 13:37:41,252 | INFO     | 
[2025-06-29 15:38:11] 2025-06-29 13:37:41,253 | INFO     | architecture information:
[2025-06-29 15:38:11] 2025-06-29 13:37:41,253 | INFO     | executing command: cat /etc/os-release
[2025-06-29 15:38:11] 2025-06-29 13:37:41,262 | INFO     | cat /etc/os-release:
[2025-06-29 15:38:11] NAME="CentOS Linux"
[2025-06-29 15:38:11] VERSION="7 (Core)"
[2025-06-29 15:38:11] ID="centos"
[2025-06-29 15:38:11] ID_LIKE="rhel fedora"
[2025-06-29 15:38:11] VERSION_ID="7"
[2025-06-29 15:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 15:38:11] ANSI_COLOR="0;31"
[2025-06-29 15:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 15:38:11] HOME_URL="https://www.centos.org/"
[2025-06-29 15:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 15:38:11] 
[2025-06-29 15:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 15:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 15:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 15:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 15:38:11] 
[2025-06-29 15:38:11] 2025-06-29 13:37:41,262 | INFO     | ***************************************
[2025-06-29 15:38:11] 2025-06-29 13:37:41,765 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-29 15:38:11] 2025-06-29 13:37:41,778 | INFO     | sufficient remaining disk space (323949166592 B)
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | INFO     | update_server=False
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 15:38:11] 2025-06-29 13:37:41,779 | INFO     | aborting loop
[2025-06-29 15:38:11] 2025-06-29 13:37:41,879 | INFO     | all payload control threads have been joined
[2025-06-29 15:38:11] 2025-06-29 13:37:41,884 | INFO     | all data control threads have been joined
[2025-06-29 15:38:11] 2025-06-29 13:37:42,785 | INFO     | [job] queue monitor thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:42,785 | INFO     | [job] retrieve thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:42,785 | INFO     | [job] job monitor thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:42,885 | INFO     | [payload] control thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:42,886 | INFO     | [data] control thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:42,965 | INFO     | [payload] validate_post thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:43,098 | INFO     | all job control threads have been joined
[2025-06-29 15:38:11] 2025-06-29 13:37:43,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 15:38:11] 2025-06-29 13:37:43,400 | INFO     | [payload] failed_post thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:43,530 | INFO     | [data] copytool_in thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:43,820 | INFO     | [job] validate thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:43,837 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:43,987 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:44,033 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:44,104 | INFO     | [job] control thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:45,193 | INFO     | [data] copytool_out thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:45,786 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:52,252 | INFO     | job.realtimelogging is not enabled
[2025-06-29 15:38:11] 2025-06-29 13:37:53,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 15:38:11] 2025-06-29 13:37:53,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694981211968)>', '<ExcThread(monitor, started 139694700463872)>']
[2025-06-29 15:38:11] 2025-06-29 13:37:58,336 | INFO     | all workflow threads have been joined
[2025-06-29 15:38:11] 2025-06-29 13:37:58,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 15:38:11] 2025-06-29 13:37:58,336 | INFO     | traces error code: 0
[2025-06-29 15:38:11] 2025-06-29 13:37:58,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 15:38:11] 2025-06-29 13:38:11,482 | INFO     | PID=1560116 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-29 15:38:11] 2025-06-29 13:38:11,483 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 15:38:11] 2025-06-29 13:38:11,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 15:38:11] 2025-06-29 13:38:11,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 15:38:11] 2025-06-29 13:38:11,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 15:38:11] 2025-06-29 13:38:11,483 | INFO     | [monitor] control thread has ended
[2025-06-29 15:38:11] 2025-06-29 13:38:11,531 [wrapper] ==== pilot stdout END ====
[2025-06-29 15:38:11] 2025-06-29 13:38:11,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 15:38:11] 2025-06-29 13:38:11,537 [wrapper] pilotpid: 1560116
[2025-06-29 15:38:11] 2025-06-29 13:38:11,539 [wrapper] Pilot exit status: 0
[2025-06-29 15:38:11] 2025-06-29 13:38:11,547 [wrapper] pandaids: 6712783876
[2025-06-29 15:38:11] 2025-06-29 13:38:11,564 [wrapper] cleanup supervisor_pilot 1578944 1560117
[2025-06-29 15:38:11] 2025-06-29 13:38:11,566 [wrapper] Test setup, not cleaning
[2025-06-29 15:38:11] 2025-06-29 13:38:11,569 [wrapper] apfmon messages muted
[2025-06-29 15:38:11] 2025-06-29 13:38:11,571 [wrapper] ==== wrapper stdout END ====
[2025-06-29 15:38:11] 2025-06-29 13:38:11,574 [wrapper] ==== wrapper stderr END ====
[2025-06-29 15:38:11]  *** Error codes and diagnostics ***
[2025-06-29 15:38:11]     "exeErrorCode": 0,
[2025-06-29 15:38:11]     "exeErrorDiag": "",
[2025-06-29 15:38:11]     "pilotErrorCode": 0,
[2025-06-29 15:38:11]     "pilotErrorDiag": "",
[2025-06-29 15:38:11]  *** Listing of results directory ***
[2025-06-29 15:38:11] total 525704
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc    530466 Jun 29 08:22 pilot3.tar.gz
[2025-06-29 15:38:11] -rwx------ 1 boinc boinc     36245 Jun 29 08:37 runpilot2-wrapper.sh
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc      5112 Jun 29 08:37 queuedata.json
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc       100 Jun 29 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 15:38:11] -rwxr-xr-x 1 boinc boinc      7986 Jun 29 14:19 run_atlas
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc       105 Jun 29 14:19 job.xml
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc 298703170 Jun 29 14:19 EVNT.45399986._000001.pool.root.1
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc    542874 Jun 29 14:19 input.tar.gz
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc     15095 Jun 29 14:19 start_atlas.sh
[2025-06-29 15:38:11] drwxrwx--x 2 boinc boinc      4096 Jun 29 14:19 shared
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc         0 Jun 29 14:19 boinc_setup_complete
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc      6515 Jun 29 14:19 init_data.xml
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc         0 Jun 29 14:19 boinc_lockfile
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc      2602 Jun 29 14:19 pandaJob.out
[2025-06-29 15:38:11] -rw------- 1 boinc boinc    970676 Jun 29 14:19 agis_schedconf.cvmfs.json
[2025-06-29 15:38:11] -rw------- 1 boinc boinc   1574086 Jun 29 14:19 agis_ddmendpoints.agis.ALL.json
[2025-06-29 15:38:11] drwx------ 4 boinc boinc      4096 Jun 29 14:19 pilot3
[2025-06-29 15:38:11] -rw------- 1 boinc boinc 234391059 Jun 29 15:37 HITS.45399988._000002.pool.root.1
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc       529 Jun 29 15:37 boinc_task_state.xml
[2025-06-29 15:38:11] -rw------- 1 boinc boinc      1027 Jun 29 15:37 memory_monitor_summary.json
[2025-06-29 15:38:11] -rw------- 1 boinc boinc    228447 Jun 29 15:37 log.45399988._000002.job.log.tgz.1
[2025-06-29 15:38:11] -rw------- 1 boinc boinc      7739 Jun 29 15:37 heartbeat.json
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc      8192 Jun 29 15:37 boinc_mmap_file
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc        27 Jun 29 15:37 wrapper_checkpoint.txt
[2025-06-29 15:38:11] -rw------- 1 boinc boinc       747 Jun 29 15:38 pilotlog.txt
[2025-06-29 15:38:11] -rw------- 1 boinc boinc        95 Jun 29 15:38 pilot_heartbeat.json
[2025-06-29 15:38:11] -rw------- 1 boinc boinc    459659 Jun 29 15:38 log.45399988._000002.job.log.1
[2025-06-29 15:38:11] -rw------- 1 boinc boinc       357 Jun 29 15:38 output.list
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc       620 Jun 29 15:38 runtime_log
[2025-06-29 15:38:11] -rw------- 1 boinc boinc    706560 Jun 29 15:38 result.tar.gz
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc      8754 Jun 29 15:38 runtime_log.err
[2025-06-29 15:38:11] -rw------- 1 boinc boinc       662 Jun 29 15:38 rQFMDmlq0p7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaJlKDmgbliam.diag
[2025-06-29 15:38:11] -rw-r--r-- 1 boinc boinc     21745 Jun 29 15:38 stderr.txt
[2025-06-29 15:38:11] HITS file was successfully produced:
[2025-06-29 15:38:11] -rw------- 1 boinc boinc 234391059 Jun 29 15:37 shared/HITS.pool.root.1
[2025-06-29 15:38:11]  *** Contents of shared directory: ***
[2025-06-29 15:38:11] total 521852
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc 298703170 Jun 29 14:19 ATLAS.root_0
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc    542874 Jun 29 14:19 input.tar.gz
[2025-06-29 15:38:11] -rw-r--r-- 2 boinc boinc     15095 Jun 29 14:19 start_atlas.sh
[2025-06-29 15:38:11] -rw------- 1 boinc boinc 234391059 Jun 29 15:37 HITS.pool.root.1
[2025-06-29 15:38:11] -rw------- 1 boinc boinc    706560 Jun 29 15:38 result.tar.gz
15:38:12 (1556406): run_atlas exited; CPU time 17673.569671
15:38:12 (1556406): called boinc_finish(0)

</stderr_txt>
]]>

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