Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
04:09:22 (651829): wrapper (7.7.26015): starting
04:09:22 (651829): wrapper: running run_atlas (--nthreads 4)
[2025-06-29 04:09:22] Arguments: --nthreads 4
[2025-06-29 04:09:22] Threads: 4
[2025-06-29 04:09:22] Checking for CVMFS
[2025-06-29 04:09:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 04:09:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 04:09:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 04:09:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 04:09:23] 2.13.0.0 3500275 546 45512 147716 2 56 3642869 6144000 13845 130560 0 3181047 99.998 21375 650 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-29 04:09:23] CVMFS is ok
[2025-06-29 04:09:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-29 04:09:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-29 04:09:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-29 04:09:23] Further information can be found at the LHC@home message board.
[2025-06-29 04:09:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 04:09:23] Checking for apptainer binary...
[2025-06-29 04:09:23] apptainer is not installed, using version from CVMFS
[2025-06-29 04:09:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 04:09:23] mz32
[2025-06-29 04:09:23] apptainer works
[2025-06-29 04:09:23] Set ATHENA_PROC_NUMBER=4
[2025-06-29 04:09:23] Set ATHENA_CORE_NUMBER=4
[2025-06-29 04:09:23] Starting ATLAS job with PandaID=6712783952
[2025-06-29 04:09:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 08:48:41]  *** The last 200 lines of the pilot log: ***
[2025-06-29 08:48:41] 2025-06-29 15:48:08,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 08:48:41] 2025-06-29 15:48:08,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 08:48:41] 2025-06-29 15:48:08,218 | INFO     | fitting pss+swap vs Time
[2025-06-29 08:48:41] 2025-06-29 15:48:08,218 | INFO     | sum of square deviations: 6378584712.5
[2025-06-29 08:48:41] 2025-06-29 15:48:08,221 | INFO     | sum of deviations: 29519114662.5
[2025-06-29 08:48:41] 2025-06-29 15:48:08,221 | INFO     | mean x: 1751203745.5
[2025-06-29 08:48:41] 2025-06-29 15:48:08,221 | INFO     | mean y: 2335634.609489051
[2025-06-29 08:48:41] 2025-06-29 15:48:08,221 | INFO     | -- intersect: -8101967512.687462
[2025-06-29 08:48:41] 2025-06-29 15:48:08,221 | INFO     | intersect: -8101967512.687462
[2025-06-29 08:48:41] 2025-06-29 15:48:08,222 | INFO     | chi2: 1.9887120320534635
[2025-06-29 08:48:41] 2025-06-29 15:48:08,222 | INFO     | sum of square deviations: 6035722470.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,224 | INFO     | sum of deviations: 44559126401.99996
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | mean x: 1751203593.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | mean y: 2342220.063197026
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | -- intersect: -12926035889.429884
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | intersect: -12926035889.429884
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | chi2: 1.3272627407496753
[2025-06-29 08:48:41] 2025-06-29 15:48:08,225 | INFO     | current chi2=1.3272627407496753 (change=33.260184513531726 %)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,226 | INFO     | sum of square deviations: 5705372090.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,228 | INFO     | sum of deviations: 43579243934.99998
[2025-06-29 08:48:41] 2025-06-29 15:48:08,228 | INFO     | mean x: 1751203440.5
[2025-06-29 08:48:41] 2025-06-29 15:48:08,228 | INFO     | mean y: 2341767.8257575757
[2025-06-29 08:48:41] 2025-06-29 15:48:08,229 | INFO     | -- intersect: -13373844869.873575
[2025-06-29 08:48:41] 2025-06-29 15:48:08,229 | INFO     | intersect: -13373844869.873575
[2025-06-29 08:48:41] 2025-06-29 15:48:08,229 | INFO     | chi2: 1.3274979753948155
[2025-06-29 08:48:41] 2025-06-29 15:48:08,229 | INFO     | current chi2=1.3274979753948155 (change=-0.01772329154718266 %)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,229 | INFO     | right removable region: 263
[2025-06-29 08:48:41] 2025-06-29 15:48:08,230 | INFO     | sum of square deviations: 6035722470.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,232 | INFO     | sum of deviations: -1930022249.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,232 | INFO     | mean x: 1751203898.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,232 | INFO     | mean y: 2349460.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,232 | INFO     | -- intersect: 562325917.2468035
[2025-06-29 08:48:41] 2025-06-29 15:48:08,232 | INFO     | intersect: 562325917.2468035
[2025-06-29 08:48:41] 2025-06-29 15:48:08,233 | INFO     | chi2: 0.7061516647538861
[2025-06-29 08:48:41] 2025-06-29 15:48:08,233 | INFO     | current chi2=0.7061516647538861 (change=64.49201023716125 %)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,233 | INFO     | sum of square deviations: 5705372090.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | sum of deviations: -6487367262.999998
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | mean x: 1751204050.5
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | mean y: 2351575.507575758
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | -- intersect: 1993580832.5719814
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | intersect: 1993580832.5719814
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | chi2: 0.674865525008981
[2025-06-29 08:48:41] 2025-06-29 15:48:08,236 | INFO     | current chi2=0.674865525008981 (change=4.430512778838981 %)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,237 | INFO     | left removable region: 20
[2025-06-29 08:48:41] 2025-06-29 15:48:08,237 | INFO     | sum of square deviations: 4449281562.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,239 | INFO     | sum of deviations: 5781144093.999996
[2025-06-29 08:48:41] 2025-06-29 15:48:08,239 | INFO     | mean x: 1751204020.0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,239 | INFO     | mean y: 2359899.893004115
[2025-06-29 08:48:41] 2025-06-29 15:48:08,239 | INFO     | -- intersect: -2273055273.6662126
[2025-06-29 08:48:41] 2025-06-29 15:48:08,239 | INFO     | intersect: -2273055273.6662126
[2025-06-29 08:48:41] 2025-06-29 15:48:08,240 | INFO     | chi2: 0.0012606403216251089
[2025-06-29 08:48:41] 2025-06-29 15:48:08,240 | INFO     | -- intersect: -2273055273.6662126
[2025-06-29 08:48:41] 2025-06-29 15:48:08,240 | INFO     | current memory leak: 1.30 B/s (using 243 data points, chi2=0.00)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,240 | INFO     | could have reported an average CPU frequency of 1994 MHz (13 samples)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | ..............................
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . Timing measurements:
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . get job = 0 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . initial setup = 3 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . payload setup = 12 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . stage-in = 0 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . payload execution = 16663 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . stage-out = 2 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | . log creation = 0 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,241 | INFO     | ..............................
[2025-06-29 08:48:41] 2025-06-29 15:48:08,346 | INFO     | 
[2025-06-29 08:48:41] 2025-06-29 15:48:08,347 | INFO     | job summary report
[2025-06-29 08:48:41] 2025-06-29 15:48:08,347 | INFO     | --------------------------------------------------
[2025-06-29 08:48:41] 2025-06-29 15:48:08,347 | INFO     | PanDA job id: 6712783952
[2025-06-29 08:48:41] 2025-06-29 15:48:08,347 | INFO     | task id: 45399988
[2025-06-29 08:48:41] 2025-06-29 15:48:08,347 | INFO     | errors: (none)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | pilot state: finished 
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | transexitcode: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | exeerrorcode: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | exeerrordiag: 
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | exitcode: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | exitmsg: OK
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | cpuconsumptiontime: 64597 s
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | nevents: 400
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | neventsw: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | pid: 663415
[2025-06-29 08:48:41] 2025-06-29 15:48:08,348 | INFO     | pgrp: 663415
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | corecount: 4
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | event service: False
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | sizes: {0: 2366492, 1: 2366691, 8: 2366953, 11: 2366981, 16675: 2399277, 16679: 2408475, 16688: 2408613}
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | --------------------------------------------------
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | 
[2025-06-29 08:48:41] 2025-06-29 15:48:08,349 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/17
[2025-06-29 08:48:41] 2025-06-29 15:48:08,386 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,386 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | job 6712783952 has completed (purged errors)
[2025-06-29 08:48:41] 2025-06-29 15:48:08,388 | INFO     | overall cleanup function is called
[2025-06-29 08:48:41] 2025-06-29 15:48:09,397 | INFO     | --- collectZombieJob: --- 10, [663415]
[2025-06-29 08:48:41] 2025-06-29 15:48:09,398 | INFO     | zombie collector waiting for pid 663415
[2025-06-29 08:48:41] 2025-06-29 15:48:09,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 08:48:41] 2025-06-29 15:48:09,398 | INFO     | collected zombie processes
[2025-06-29 08:48:41] 2025-06-29 15:48:09,398 | INFO     | will attempt to kill all subprocesses of pid=663415
[2025-06-29 08:48:41] 2025-06-29 15:48:10,008 | INFO     | process IDs to be killed: [663415] (in reverse order)
[2025-06-29 08:48:41] 2025-06-29 15:48:10,249 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 08:48:41] 2025-06-29 15:48:10,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 08:48:41] 2025-06-29 15:48:10,266 | INFO     | did not find any defunct processes belonging to 663415
[2025-06-29 08:48:41] 2025-06-29 15:48:10,282 | INFO     | did not find any defunct processes belonging to 663415
[2025-06-29 08:48:41] 2025-06-29 15:48:10,283 | INFO     | ready for new job
[2025-06-29 08:48:41] 2025-06-29 15:48:10,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 08:48:41] 2025-06-29 15:48:10,286 | INFO     | ***************************************
[2025-06-29 08:48:41] 2025-06-29 15:48:10,286 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 08:48:41] 2025-06-29 15:48:10,286 | INFO     | ***************************************
[2025-06-29 08:48:41] 2025-06-29 15:48:10,286 | INFO     | 
[2025-06-29 08:48:41] 2025-06-29 15:48:10,296 | INFO     | architecture information:
[2025-06-29 08:48:41] 2025-06-29 15:48:10,297 | INFO     | executing command: cat /etc/os-release
[2025-06-29 08:48:41] 2025-06-29 15:48:10,323 | INFO     | cat /etc/os-release:
[2025-06-29 08:48:41] NAME="CentOS Linux"
[2025-06-29 08:48:41] VERSION="7 (Core)"
[2025-06-29 08:48:41] ID="centos"
[2025-06-29 08:48:41] ID_LIKE="rhel fedora"
[2025-06-29 08:48:41] VERSION_ID="7"
[2025-06-29 08:48:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 08:48:41] ANSI_COLOR="0;31"
[2025-06-29 08:48:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 08:48:41] HOME_URL="https://www.centos.org/"
[2025-06-29 08:48:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 08:48:41] 
[2025-06-29 08:48:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 08:48:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 08:48:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 08:48:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 08:48:41] 
[2025-06-29 08:48:41] 2025-06-29 15:48:10,324 | INFO     | ***************************************
[2025-06-29 08:48:41] 2025-06-29 15:48:10,827 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/17
[2025-06-29 08:48:41] 2025-06-29 15:48:10,879 | INFO     | sufficient remaining disk space (260366663680 B)
[2025-06-29 08:48:41] 2025-06-29 15:48:10,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 08:48:41] 2025-06-29 15:48:10,880 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 08:48:41] 2025-06-29 15:48:10,880 | INFO     | update_server=False
[2025-06-29 08:48:41] 2025-06-29 15:48:10,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 08:48:41] 2025-06-29 15:48:10,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 08:48:41] 2025-06-29 15:48:10,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 08:48:41] 2025-06-29 15:48:10,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 08:48:41] 2025-06-29 15:48:10,881 | INFO     | aborting loop
[2025-06-29 08:48:41] 2025-06-29 15:48:11,668 | INFO     | all data control threads have been joined
[2025-06-29 08:48:41] 2025-06-29 15:48:11,870 | INFO     | all payload control threads have been joined
[2025-06-29 08:48:41] 2025-06-29 15:48:11,885 | INFO     | [job] retrieve thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:11,887 | INFO     | [job] job monitor thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:11,951 | INFO     | [data] copytool_in thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:11,964 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,190 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,480 | INFO     | [payload] validate_post thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,573 | INFO     | all job control threads have been joined
[2025-06-29 08:48:41] 2025-06-29 15:48:12,674 | INFO     | [data] control thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,838 | INFO     | [payload] failed_post thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,852 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,876 | INFO     | [payload] control thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:12,890 | INFO     | [data] copytool_out thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:13,328 | INFO     | [job] validate thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:13,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 08:48:41] 2025-06-29 15:48:13,579 | INFO     | [job] control thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:14,363 | INFO     | [job] queue monitor thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:14,888 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:21,548 | INFO     | job.realtimelogging is not enabled
[2025-06-29 08:48:41] 2025-06-29 15:48:22,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 08:48:41] 2025-06-29 15:48:24,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130142653622080)>', '<ExcThread(monitor, started 130142097614592)>']
[2025-06-29 08:48:41] 2025-06-29 15:48:29,357 | INFO     | all workflow threads have been joined
[2025-06-29 08:48:41] 2025-06-29 15:48:29,358 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 08:48:41] 2025-06-29 15:48:29,358 | INFO     | traces error code: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:29,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 08:48:41] 2025-06-29 15:48:40,844 | INFO     | PID=655985 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-29 08:48:41] 2025-06-29 15:48:40,844 | INFO     | .. there are 11 such processes running
[2025-06-29 08:48:41] 2025-06-29 15:48:40,845 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 08:48:41] 2025-06-29 15:48:40,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 08:48:41] 2025-06-29 15:48:40,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 08:48:41] 2025-06-29 15:48:40,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 08:48:41] 2025-06-29 15:48:40,846 | CRITICAL | thread 'MainThread' is not alive
[2025-06-29 08:48:41] 2025-06-29 15:48:40,846 | INFO     | [monitor] control thread has ended
[2025-06-29 08:48:41] 2025-06-29 15:48:40,978 [wrapper] ==== pilot stdout END ====
[2025-06-29 08:48:41] 2025-06-29 15:48:40,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 08:48:41] 2025-06-29 15:48:40,993 [wrapper] pilotpid: 655985
[2025-06-29 08:48:41] 2025-06-29 15:48:41,000 [wrapper] Pilot exit status: 0
[2025-06-29 08:48:41] 2025-06-29 15:48:41,013 [wrapper] pandaids: 6712783952
[2025-06-29 08:48:41] 2025-06-29 15:48:41,092 [wrapper] cleanup supervisor_pilot 1375903 655986
[2025-06-29 08:48:41] 2025-06-29 15:48:41,095 [wrapper] Test setup, not cleaning
[2025-06-29 08:48:41] 2025-06-29 15:48:41,103 [wrapper] apfmon messages muted
[2025-06-29 08:48:41] 2025-06-29 15:48:41,106 [wrapper] ==== wrapper stdout END ====
[2025-06-29 08:48:41] 2025-06-29 15:48:41,110 [wrapper] ==== wrapper stderr END ====
[2025-06-29 08:48:41]  *** Error codes and diagnostics ***
[2025-06-29 08:48:41]     "exeErrorCode": 0,
[2025-06-29 08:48:41]     "exeErrorDiag": "",
[2025-06-29 08:48:41]     "pilotErrorCode": 0,
[2025-06-29 08:48:41]     "pilotErrorDiag": "",
[2025-06-29 08:48:41]  *** Listing of results directory ***
[2025-06-29 08:48:41] total 535312
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc    530466 Jun 28 23:22 pilot3.tar.gz
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc      5112 Jun 28 23:36 queuedata.json
[2025-06-29 08:48:41] -rwx------ 1 boinc boinc     36245 Jun 28 23:37 runpilot2-wrapper.sh
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc       100 Jun 29 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 08:48:41] -rwxr-xr-x 1 boinc boinc      7986 Jun 29 04:09 run_atlas
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc       105 Jun 29 04:09 job.xml
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc 300751387 Jun 29 04:09 EVNT.45399986._000004.pool.root.1
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc     15095 Jun 29 04:09 start_atlas.sh
[2025-06-29 08:48:41] drwxrwx--x 2 boinc boinc      4096 Jun 29 04:09 shared
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc    542891 Jun 29 04:09 input.tar.gz
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc     10263 Jun 29 04:09 init_data.xml
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc         0 Jun 29 04:09 boinc_setup_complete
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc         0 Jun 29 04:09 boinc_lockfile
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc      2606 Jun 29 04:09 pandaJob.out
[2025-06-29 08:48:41] -rw------- 1 boinc boinc    970684 Jun 29 04:09 agis_schedconf.cvmfs.json
[2025-06-29 08:48:41] drwx------ 4 boinc boinc      4096 Jun 29 04:09 pilot3
[2025-06-29 08:48:41] -rw------- 1 boinc boinc 239806264 Jun 29 08:47 HITS.45399988._000078.pool.root.1
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc       530 Jun 29 08:47 boinc_task_state.xml
[2025-06-29 08:48:41] -rw------- 1 boinc boinc      1025 Jun 29 08:47 memory_monitor_summary.json
[2025-06-29 08:48:41] -rw------- 1 boinc boinc   1574086 Jun 29 08:47 agis_ddmendpoints.agis.ALL.json
[2025-06-29 08:48:41] -rw------- 1 boinc boinc    348586 Jun 29 08:47 log.45399988._000078.job.log.tgz.1
[2025-06-29 08:48:41] -rw------- 1 boinc boinc      7711 Jun 29 08:48 heartbeat.json
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc      8192 Jun 29 08:48 boinc_mmap_file
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc        28 Jun 29 08:48 wrapper_checkpoint.txt
[2025-06-29 08:48:41] -rw------- 1 boinc boinc        95 Jun 29 08:48 pilot_heartbeat.json
[2025-06-29 08:48:41] -rw------- 1 boinc boinc       892 Jun 29 08:48 pilotlog.txt
[2025-06-29 08:48:41] -rw------- 1 boinc boinc   1523147 Jun 29 08:48 log.45399988._000078.job.log.1
[2025-06-29 08:48:41] -rw------- 1 boinc boinc       357 Jun 29 08:48 output.list
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc       620 Jun 29 08:48 runtime_log
[2025-06-29 08:48:41] -rw------- 1 boinc boinc   1894400 Jun 29 08:48 result.tar.gz
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc      8757 Jun 29 08:48 runtime_log.err
[2025-06-29 08:48:41] -rw------- 1 boinc boinc       657 Jun 29 08:48 c3XNDmaq0p7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzA4KDmz7n8Vo.diag
[2025-06-29 08:48:41] -rw-r--r-- 1 boinc boinc     20961 Jun 29 08:48 stderr.txt
[2025-06-29 08:48:41] HITS file was successfully produced:
[2025-06-29 08:48:41] -rw------- 1 boinc boinc 239806264 Jun 29 08:47 shared/HITS.pool.root.1
[2025-06-29 08:48:41]  *** Contents of shared directory: ***
[2025-06-29 08:48:41] total 530300
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc 300751387 Jun 29 04:09 ATLAS.root_0
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc     15095 Jun 29 04:09 start_atlas.sh
[2025-06-29 08:48:41] -rw-r--r-- 2 boinc boinc    542891 Jun 29 04:09 input.tar.gz
[2025-06-29 08:48:41] -rw------- 1 boinc boinc 239806264 Jun 29 08:47 HITS.pool.root.1
[2025-06-29 08:48:41] -rw------- 1 boinc boinc   1894400 Jun 29 08:48 result.tar.gz
08:48:43 (651829): run_atlas exited; CPU time 65598.513451
08:48:43 (651829): called boinc_finish(0)

</stderr_txt>
]]>

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