Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:36:22 (624854): wrapper (7.7.26015): starting
11:36:22 (624854): wrapper: running run_atlas (--nthreads 4)
[2025-06-29 11:36:23] Arguments: --nthreads 4
[2025-06-29 11:36:23] Threads: 4
[2025-06-29 11:36:23] Checking for CVMFS
[2025-06-29 11:36:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-29 11:36:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-29 11:36:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-29 11:36:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-29 11:36:23] 2.9.2.0 540713 296 61128 147713 1 56 33774898 36864001 0 130560 0 216904 99.986 13369 302 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-29 11:36:23] CVMFS is ok
[2025-06-29 11:36:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-29 11:36:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-29 11:36:23] Further information can be found at the LHC@home message board.
[2025-06-29 11:36:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-29 11:36:23] Checking for apptainer binary...
[2025-06-29 11:36:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-29 11:36:23] Running /usr/bin/apptainer --version
[2025-06-29 11:36:23] apptainer version 1.4.1-1.1
[2025-06-29 11:36:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-29 11:36:23] thA319a
[2025-06-29 11:36:23] apptainer works
[2025-06-29 11:36:23] Set ATHENA_PROC_NUMBER=4
[2025-06-29 11:36:23] Set ATHENA_CORE_NUMBER=4
[2025-06-29 11:36:23] Starting ATLAS job with PandaID=6712715736
[2025-06-29 11:36:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-29 13:15:16]  *** The last 200 lines of the pilot log: ***
[2025-06-29 13:15:16]  mtime=0
[2025-06-29 13:15:16]  protocol_id=None
[2025-06-29 13:15:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-29 13:15:16]  replicas=None
[2025-06-29 13:15:16]  scope=mc23_13p6TeV
[2025-06-29 13:15:16]  status=None
[2025-06-29 13:15:16]  status_code=0
[2025-06-29 13:15:16]  storage_token=
[2025-06-29 13:15:16]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6712715736/log.45399354._000091.job.log.tgz.1
[2025-06-29 13:15:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/70/log.45399354._000091.job.log.tgz.1
[2025-06-29 13:15:16]  workdir=None
[2025-06-29 13:15:16] ]
[2025-06-29 13:15:16] 2025-06-29 11:14:36,623 | INFO     | transferring file log.45399354._000091.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6712715736/log.45399354._000091.job.log.tgz.1 to /local/data/boinc/
[2025-06-29 13:15:16] 2025-06-29 11:14:36,623 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6712715736/log.45399354._000091.job.log.tgz.1 /local/data/boinc/slots/0/log.45399354._0000
[2025-06-29 13:15:16] 2025-06-29 11:14:36,641 | INFO     | adding to output.list: log.45399354._000091.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/70/log.45399354._000091.job.log.tg
[2025-06-29 13:15:16] 2025-06-29 11:14:36,641 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-29 13:15:16] 2025-06-29 11:14:36,641 | INFO     | summary of transferred files:
[2025-06-29 13:15:16] 2025-06-29 11:14:36,641 | INFO     |  -- lfn=log.45399354._000091.job.log.tgz.1, status_code=0, status=transferred
[2025-06-29 13:15:16] 2025-06-29 11:14:36,641 | INFO     | stage-out finished correctly
[2025-06-29 13:15:16] 2025-06-29 11:14:37,066 | INFO     | monitor loop #451: job 0:6712715736 is in state 'finished'
[2025-06-29 13:15:16] 2025-06-29 11:14:37,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 13:15:16] 2025-06-29 11:14:38,510 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-29 13:15:16] 2025-06-29 11:14:39,571 | INFO     | monitor loop #452: job 0:6712715736 is in state 'finished'
[2025-06-29 13:15:16] 2025-06-29 11:14:39,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 13:15:16] 2025-06-29 11:14:41,116 | INFO     | job 6712715736 has state=finished
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | preparing for final server update for job 6712715736 in state='finished'
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | this job has now completed (state=finished)
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | log transfer has been attempted: DONE
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | job 6712715736 has finished - writing final server update
[2025-06-29 13:15:16] 2025-06-29 11:14:41,117 | INFO     | total number of processed events: 400 (read)
[2025-06-29 13:15:16] 2025-06-29 11:14:41,118 | INFO     | executing command: lscpu
[2025-06-29 13:15:16] 2025-06-29 11:14:41,140 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-29 13:15:16] 2025-06-29 11:14:42,074 | INFO     | monitor loop #453: job 0:6712715736 is in state 'finished'
[2025-06-29 13:15:16] 2025-06-29 11:14:42,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,577 | INFO     | monitor loop #454: job 0:6712715736 is in state 'finished'
[2025-06-29 13:15:16] 2025-06-29 11:14:44,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,610 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-29 13:15:16] 2025-06-29 11:14:44,611 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3554.0711874999993
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6712715736/memory_monitor_summary.json (trf name=prmon)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | INFO     | extracted standard info from prmon json
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | INFO     | extracted standard memory fields from prmon json
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-29 13:15:16] 2025-06-29 11:14:44,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-29 13:15:16] 2025-06-29 11:14:44,614 | INFO     | fitting pss+swap vs Time
[2025-06-29 13:15:16] 2025-06-29 11:14:44,614 | INFO     | sum of square deviations: 226022842.5
[2025-06-29 13:15:16] 2025-06-29 11:14:44,614 | INFO     | sum of deviations: -13384027781.5
[2025-06-29 13:15:16] 2025-06-29 11:14:44,614 | INFO     | mean x: 1751192833.5
[2025-06-29 13:15:16] 2025-06-29 11:14:44,614 | INFO     | mean y: 2511205.5888888887
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | -- intersect: 103700054671.0362
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | intersect: 103700054671.0362
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | chi2: 0.11133012890549895
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | -- intersect: 103700054671.0362
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | current memory leak: -59.22 B/s (using 90 data points, chi2=0.11)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | could have reported an average CPU frequency of 3780 MHz (7 samples)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | ..............................
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . Timing measurements:
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . get job = 0 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . initial setup = 1 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . payload setup = 5 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . stage-in = 0 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . payload execution = 5862 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . stage-out = 0 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | . log creation = 0 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,615 | INFO     | ..............................
[2025-06-29 13:15:16] 2025-06-29 11:14:44,657 | INFO     | 
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | job summary report
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | --------------------------------------------------
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | PanDA job id: 6712715736
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | task id: 45399354
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | errors: (none)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | pilot state: finished 
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | transexitcode: 0
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | exeerrorcode: 0
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | exeerrordiag: 
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | exitcode: 0
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | exitmsg: OK
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | cpuconsumptiontime: 22452 s
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | nevents: 400
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | neventsw: 0
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | pid: 635233
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | pgrp: 635233
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | corecount: 4
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | event service: False
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | sizes: {0: 2366449, 1: 2366704, 4: 2366966, 11: 2366994, 5870: 2393864, 5871: 2402868, 5873: 2403052, 5879: 2403246}
[2025-06-29 13:15:16] 2025-06-29 11:14:44,658 | INFO     | --------------------------------------------------
[2025-06-29 13:15:16] 2025-06-29 11:14:44,659 | INFO     | 
[2025-06-29 13:15:16] 2025-06-29 11:14:44,659 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | job 6712715736 has completed (purged errors)
[2025-06-29 13:15:16] 2025-06-29 11:14:44,678 | INFO     | overall cleanup function is called
[2025-06-29 13:15:16] 2025-06-29 11:14:45,685 | INFO     | --- collectZombieJob: --- 10, [635233]
[2025-06-29 13:15:16] 2025-06-29 11:14:45,685 | INFO     | zombie collector waiting for pid 635233
[2025-06-29 13:15:16] 2025-06-29 11:14:45,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-29 13:15:16] 2025-06-29 11:14:45,685 | INFO     | collected zombie processes
[2025-06-29 13:15:16] 2025-06-29 11:14:45,685 | INFO     | will attempt to kill all subprocesses of pid=635233
[2025-06-29 13:15:16] 2025-06-29 11:14:45,736 | INFO     | process IDs to be killed: [635233] (in reverse order)
[2025-06-29 13:15:16] 2025-06-29 11:14:45,769 | WARNING  | found no corresponding commands to process id(s)
[2025-06-29 13:15:16] 2025-06-29 11:14:45,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-29 13:15:16] 2025-06-29 11:14:45,772 | INFO     | did not find any defunct processes belonging to 635233
[2025-06-29 13:15:16] 2025-06-29 11:14:45,773 | INFO     | did not find any defunct processes belonging to 635233
[2025-06-29 13:15:16] 2025-06-29 11:14:45,773 | INFO     | ready for new job
[2025-06-29 13:15:16] 2025-06-29 11:14:45,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-29 13:15:16] 2025-06-29 11:14:45,774 | INFO     | ***************************************
[2025-06-29 13:15:16] 2025-06-29 11:14:45,774 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-29 13:15:16] 2025-06-29 11:14:45,774 | INFO     | ***************************************
[2025-06-29 13:15:16] 2025-06-29 11:14:45,774 | INFO     | 
[2025-06-29 13:15:16] 2025-06-29 11:14:45,775 | INFO     | architecture information:
[2025-06-29 13:15:16] 2025-06-29 11:14:45,775 | INFO     | executing command: cat /etc/os-release
[2025-06-29 13:15:16] 2025-06-29 11:14:45,788 | INFO     | cat /etc/os-release:
[2025-06-29 13:15:16] NAME="CentOS Linux"
[2025-06-29 13:15:16] VERSION="7 (Core)"
[2025-06-29 13:15:16] ID="centos"
[2025-06-29 13:15:16] ID_LIKE="rhel fedora"
[2025-06-29 13:15:16] VERSION_ID="7"
[2025-06-29 13:15:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-29 13:15:16] ANSI_COLOR="0;31"
[2025-06-29 13:15:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-29 13:15:16] HOME_URL="https://www.centos.org/"
[2025-06-29 13:15:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-29 13:15:16] 
[2025-06-29 13:15:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-29 13:15:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-29 13:15:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-29 13:15:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-29 13:15:16] 
[2025-06-29 13:15:16] 2025-06-29 11:14:45,789 | INFO     | ***************************************
[2025-06-29 13:15:16] 2025-06-29 11:14:46,292 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | INFO     | sufficient remaining disk space (322762178560 B)
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | INFO     | current server update state: UPDATING_FINAL
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | INFO     | update_server=False
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-29 13:15:16] 2025-06-29 11:14:46,310 | INFO     | aborting loop
[2025-06-29 13:15:16] 2025-06-29 11:14:46,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-29 13:15:16] 2025-06-29 11:14:46,357 | INFO     | all data control threads have been joined
[2025-06-29 13:15:16] 2025-06-29 11:14:47,091 | INFO     | all payload control threads have been joined
[2025-06-29 13:15:16] 2025-06-29 11:14:47,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-29 13:15:16] 2025-06-29 11:14:47,316 | INFO     | [job] retrieve thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:47,316 | INFO     | [job] job monitor thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:47,317 | INFO     | [job] queue monitor thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:47,363 | INFO     | [data] control thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:47,415 | INFO     | [payload] execute_payloads thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:47,706 | INFO     | all job control threads have been joined
[2025-06-29 13:15:16] 2025-06-29 11:14:47,777 | INFO     | [data] copytool_in thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,097 | INFO     | [payload] control thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,175 | INFO     | [payload] validate_post thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,190 | INFO     | [payload] failed_post thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,652 | INFO     | [job] create_data_payload thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,686 | INFO     | [job] validate thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,712 | INFO     | [job] control thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:48,758 | INFO     | [payload] validate_pre thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:49,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-29 13:15:16] 2025-06-29 11:14:49,204 | INFO     | [data] copytool_out thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:53,070 | INFO     | [data] queue_monitor thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:57,034 | INFO     | job.realtimelogging is not enabled
[2025-06-29 13:15:16] 2025-06-29 11:14:58,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-29 13:15:16] 2025-06-29 11:14:59,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226516649792)>', '<ExcThread(monitor, started 140225573545728)>']
[2025-06-29 13:15:16] 2025-06-29 11:15:04,117 | INFO     | all workflow threads have been joined
[2025-06-29 13:15:16] 2025-06-29 11:15:04,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-29 13:15:16] 2025-06-29 11:15:04,117 | INFO     | traces error code: 0
[2025-06-29 13:15:16] 2025-06-29 11:15:04,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-29 13:15:16] 2025-06-29 11:15:16,632 | INFO     | PID=628572 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-29 13:15:16] 2025-06-29 11:15:16,633 | INFO     | found 0 job(s) in 20 queues
[2025-06-29 13:15:16] 2025-06-29 11:15:16,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-29 13:15:16] 2025-06-29 11:15:16,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-29 13:15:16] 2025-06-29 11:15:16,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-29 13:15:16] 2025-06-29 11:15:16,633 | INFO     | [monitor] control thread has ended
[2025-06-29 13:15:16] 2025-06-29 11:15:16,709 [wrapper] ==== pilot stdout END ====
[2025-06-29 13:15:16] 2025-06-29 11:15:16,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-29 13:15:16] 2025-06-29 11:15:16,716 [wrapper] pilotpid: 628572
[2025-06-29 13:15:16] 2025-06-29 11:15:16,720 [wrapper] Pilot exit status: 0
[2025-06-29 13:15:16] 2025-06-29 11:15:16,731 [wrapper] pandaids: 6712715736
[2025-06-29 13:15:16] 2025-06-29 11:15:16,755 [wrapper] cleanup supervisor_pilot  648272 628573
[2025-06-29 13:15:16] 2025-06-29 11:15:16,759 [wrapper] Test setup, not cleaning
[2025-06-29 13:15:16] 2025-06-29 11:15:16,763 [wrapper] apfmon messages muted
[2025-06-29 13:15:16] 2025-06-29 11:15:16,767 [wrapper] ==== wrapper stdout END ====
[2025-06-29 13:15:16] 2025-06-29 11:15:16,771 [wrapper] ==== wrapper stderr END ====
[2025-06-29 13:15:16]  *** Error codes and diagnostics ***
[2025-06-29 13:15:16]     "exeErrorCode": 0,
[2025-06-29 13:15:16]     "exeErrorDiag": "",
[2025-06-29 13:15:16]     "pilotErrorCode": 0,
[2025-06-29 13:15:16]     "pilotErrorDiag": "",
[2025-06-29 13:15:16]  *** Listing of results directory ***
[2025-06-29 13:15:16] total 525088
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc    530466 Jun 29 05:23 pilot3.tar.gz
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc      5112 Jun 29 05:50 queuedata.json
[2025-06-29 13:15:16] -rwx------ 1 boinc boinc     36245 Jun 29 05:50 runpilot2-wrapper.sh
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc       100 Jun 29 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-29 13:15:16] -rwxr-xr-x 1 boinc boinc      7986 Jun 29 11:36 run_atlas
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc       105 Jun 29 11:36 job.xml
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc 294261315 Jun 29 11:36 EVNT.45399351._000004.pool.root.1
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc    542888 Jun 29 11:36 input.tar.gz
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc     15095 Jun 29 11:36 start_atlas.sh
[2025-06-29 13:15:16] drwxrwx--x 2 boinc boinc      4096 Jun 29 11:36 shared
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc         0 Jun 29 11:36 boinc_setup_complete
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc      6444 Jun 29 11:36 init_data.xml
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc         0 Jun 29 11:36 boinc_lockfile
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc      2619 Jun 29 11:36 pandaJob.out
[2025-06-29 13:15:16] -rw------- 1 boinc boinc    970684 Jun 29 11:36 agis_schedconf.cvmfs.json
[2025-06-29 13:15:16] -rw------- 1 boinc boinc   1574086 Jun 29 11:36 agis_ddmendpoints.agis.ALL.json
[2025-06-29 13:15:16] drwx------ 4 boinc boinc      4096 Jun 29 11:36 pilot3
[2025-06-29 13:15:16] -rw------- 1 boinc boinc 237936587 Jun 29 13:14 HITS.45399354._000091.pool.root.1
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc       529 Jun 29 13:14 boinc_task_state.xml
[2025-06-29 13:15:16] -rw------- 1 boinc boinc      1031 Jun 29 13:14 memory_monitor_summary.json
[2025-06-29 13:15:16] -rw------- 1 boinc boinc    259520 Jun 29 13:14 log.45399354._000091.job.log.tgz.1
[2025-06-29 13:15:16] -rw------- 1 boinc boinc      7749 Jun 29 13:14 heartbeat.json
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc      8192 Jun 29 13:14 boinc_mmap_file
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc        27 Jun 29 13:15 wrapper_checkpoint.txt
[2025-06-29 13:15:16] -rw------- 1 boinc boinc       746 Jun 29 13:15 pilotlog.txt
[2025-06-29 13:15:16] -rw------- 1 boinc boinc        95 Jun 29 13:15 pilot_heartbeat.json
[2025-06-29 13:15:16] -rw------- 1 boinc boinc    563896 Jun 29 13:15 log.45399354._000091.job.log.1
[2025-06-29 13:15:16] -rw------- 1 boinc boinc       357 Jun 29 13:15 output.list
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc       620 Jun 29 13:15 runtime_log
[2025-06-29 13:15:16] -rw------- 1 boinc boinc    839680 Jun 29 13:15 result.tar.gz
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc      8739 Jun 29 13:15 runtime_log.err
[2025-06-29 13:15:16] -rw------- 1 boinc boinc       660 Jun 29 13:15 cWRKDm5Eyp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmak3KDm9lm8Hn.diag
[2025-06-29 13:15:16] -rw-r--r-- 1 boinc boinc     21726 Jun 29 13:15 stderr.txt
[2025-06-29 13:15:16] HITS file was successfully produced:
[2025-06-29 13:15:16] -rw------- 1 boinc boinc 237936587 Jun 29 13:14 shared/HITS.pool.root.1
[2025-06-29 13:15:16]  *** Contents of shared directory: ***
[2025-06-29 13:15:16] total 521104
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc 294261315 Jun 29 11:36 ATLAS.root_0
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc    542888 Jun 29 11:36 input.tar.gz
[2025-06-29 13:15:16] -rw-r--r-- 2 boinc boinc     15095 Jun 29 11:36 start_atlas.sh
[2025-06-29 13:15:16] -rw------- 1 boinc boinc 237936587 Jun 29 13:14 HITS.pool.root.1
[2025-06-29 13:15:16] -rw------- 1 boinc boinc    839680 Jun 29 13:15 result.tar.gz
13:15:18 (624854): run_atlas exited; CPU time 22476.038450
13:15:18 (624854): called boinc_finish(0)

</stderr_txt>
]]>

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