Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-29 13:14:37 (25604): Detected: vboxwrapper 26206
2025-06-29 13:14:37 (25604): Detected: BOINC client v8.0.2
2025-06-29 13:14:38 (25604): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-06-29 13:14:38 (25604): Successfully copied 'init_data.xml' to the shared directory.
2025-06-29 13:14:38 (25604): Create VM. (boinc_bec09186ae05741b, slot#3)
2025-06-29 13:14:39 (25604): Setting Memory Size for VM. (6600MB)
2025-06-29 13:14:39 (25604): Setting CPU Count for VM. (4)
2025-06-29 13:14:39 (25604): Setting Chipset Options for VM.
2025-06-29 13:14:40 (25604): Setting Graphics Controller Options for VM.
2025-06-29 13:14:40 (25604): Setting Boot Options for VM.
2025-06-29 13:14:40 (25604): Setting Network Configuration for NAT.
2025-06-29 13:14:40 (25604): Enabling VM Network Access.
2025-06-29 13:14:41 (25604): Disabling USB Support for VM.
2025-06-29 13:14:41 (25604): Disabling COM Port Support for VM.
2025-06-29 13:14:41 (25604): Disabling LPT Port Support for VM.
2025-06-29 13:14:41 (25604): Disabling Audio Support for VM.
2025-06-29 13:14:42 (25604): Disabling Clipboard Support for VM.
2025-06-29 13:14:42 (25604): Disabling Drag and Drop Support for VM.
2025-06-29 13:14:42 (25604): Adding storage controller(s) to VM.
2025-06-29 13:14:42 (25604): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-29 13:14:43 (25604): Adding VirtualBox Guest Additions to VM.
2025-06-29 13:14:43 (25604): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-29 13:14:43 (25604): forwarding host port 56831 to guest port 80
2025-06-29 13:14:44 (25604): Enabling remote desktop for VM.
2025-06-29 13:14:44 (25604): Enabling shared directory for VM.
2025-06-29 13:14:45 (25604): Starting VM using VBoxManage interface. (boinc_bec09186ae05741b, slot#3)
2025-06-29 13:14:52 (25604): Successfully started VM. (PID = '25864')
2025-06-29 13:14:52 (25604): Reporting VM Process ID to BOINC.
2025-06-29 13:14:52 (25604): Guest Log: BIOS: VirtualBox 7.0.14
2025-06-29 13:14:52 (25604): Guest Log: CPUID EDX: 0x178bfbff
2025-06-29 13:14:52 (25604): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-29 13:14:52 (25604): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-29 13:14:52 (25604): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-29 13:14:52 (25604): Detected: Web Application Enabled (http://localhost:56831)
2025-06-29 13:14:52 (25604): Detected: Remote Desktop Enabled (localhost:56852)
2025-06-29 13:14:52 (25604): Preference change detected
2025-06-29 13:14:52 (25604): Setting CPU throttle for VM. (100%)
2025-06-29 13:14:52 (25604): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 13:14:54 (25604): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-29 13:14:54 (25604): Guest Log: BIOS: Booting from Hard Disk...
2025-06-29 13:14:57 (25604): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-29 13:14:57 (25604): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-29 13:14:57 (25604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-29 13:15:02 (25604): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-29 13:15:02 (25604): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-29 13:15:08 (25604): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000208 main     Log opened 2025-06-29T13:15:05.873870000Z
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000310 main     OS Product: Linux
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000362 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000387 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000388 main     Process ID: 1369
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.000388 main     Package type: LINUX_64BITS_GENERIC
2025-06-29 13:15:08 (25604): Guest Log: 00:00:00.001070 main     5.2.32 r132073 started. Verbose level = 0
2025-06-29 13:15:08 (25604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-29 13:15:08 (25604): Guest Log: [INFO] Mounting shared directory
2025-06-29 13:15:08 (25604): Guest Log: [INFO] Checking for init_data.xml
2025-06-29 13:15:11 (25604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-29 13:15:11 (25604): Guest Log: [INFO] Detected branch: prod
2025-06-29 13:15:12 (25604): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-29 13:15:12 (25604): Guest Log: Copying input files
2025-06-29 13:15:13 (25604): Guest Log: Copied input files into RunAtlas.
2025-06-29 13:15:13 (25604): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-06-29 13:15:18 (25604): Guest Log: 00:00:10.004557 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 924 042 000ns (GuestNow=1 751 199 317 953 038 000 ns GuestLast=1 751 202 905 877 080 000 ns fSetTimeLastLoop=true )
2025-06-29 13:15:21 (25604): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-29 13:15:21 (25604): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-29 13:15:21 (25604): Guest Log: 2.6.3.0 1645 0 29616 147717 4 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-06-29 13:15:23 (25604): Guest Log: copied the webapp to /var/www
2025-06-29 13:15:23 (25604): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-29 13:15:23 (25604): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-29 13:15:23 (25604): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-29 13:15:23 (25604): Guest Log:  *** Starting ATLAS job. (PandaID=6712671322 taskID=45400040) ***
2025-06-29 14:54:56 (25604): Status Report: Elapsed Time: '6000.000000'
2025-06-29 14:54:56 (25604): Status Report: CPU Time: '22088.640625'
2025-06-29 16:35:01 (25604): Status Report: Elapsed Time: '12000.000000'
2025-06-29 16:35:01 (25604): Status Report: CPU Time: '46079.515625'
2025-06-29 17:38:59 (25604): Guest Log:  *** Job finished ***
2025-06-29 17:38:59 (25604): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:41,136 | INFO     | end of generic workflow (traces error code: 0)
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:41,137 | INFO     | traces error code: 0
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:41,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,145 | INFO     | PID=5962 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | INFO     | found 0 job(s) in 20 queues
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | CRITICAL | thread 'MainThread' is not alive
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,146 | INFO     | [monitor] control thread has ended
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,234 [wrapper] ==== pilot stdout END ====
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,239 [wrapper] ==== wrapper stdout RESUME ====
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,244 [wrapper] pilotpid: 5962
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,249 [wrapper] Pilot exit status: 0
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,328 [wrapper] pandaids: 6712671322
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,357 [wrapper] cleanup supervisor_pilot 16506 5963
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,361 [wrapper] Test setup, not cleaning
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,367 [wrapper] apfmon messages muted
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,371 [wrapper] ==== wrapper stdout END ====
2025-06-29 17:38:59 (25604): Guest Log: 2025-06-29 16:38:59,376 [wrapper] ==== wrapper stderr END ====
2025-06-29 17:38:59 (25604): Guest Log:  *** Error codes and diagnostics ***
2025-06-29 17:38:59 (25604): Guest Log:     "exeErrorCode": 0,
2025-06-29 17:38:59 (25604): Guest Log:     "exeErrorDiag": "",
2025-06-29 17:38:59 (25604): Guest Log:     "pilotErrorCode": 0,
2025-06-29 17:38:59 (25604): Guest Log:     "pilotErrorDiag": "",
2025-06-29 17:38:59 (25604): Guest Log:  *** Listing of results directory ***
2025-06-29 17:38:59 (25604): Guest Log: total 248404
2025-06-29 17:38:59 (25604): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 29 02:27 pilot3.tar.gz
2025-06-29 17:38:59 (25604): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 29 02:33 queuedata.json
2025-06-29 17:38:59 (25604): Guest Log: -rwx------. 1 atlas atlas     36245 Jun 29 02:33 runpilot2-wrapper.sh
2025-06-29 17:38:59 (25604): Guest Log: -rwxr-xr-x. 1 atlas atlas      9291 Jun 29 12:15 init_data.xml
2025-06-29 17:38:59 (25604): Guest Log: -rwxr-xr-x. 1 atlas atlas    542891 Jun 29 12:15 input.tar.gz
2025-06-29 17:38:59 (25604): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jun 29 12:15 start_atlas.sh
2025-06-29 17:38:59 (25604): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 29 12:15 EVNT.45400038._000004.pool.root.1 -> /data/./ATLAS.root_0
2025-06-29 17:38:59 (25604): Guest Log: -rw-r--r--. 1 atlas atlas      2612 Jun 29 12:15 pandaJob.out
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas    970684 Jun 29 12:16 agis_schedconf.cvmfs.json
2025-06-29 17:38:59 (25604): Guest Log: drwx------. 4 atlas atlas      4096 Jun 29 12:16 pilot3
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas 247242992 Jun 29 16:37 HITS.45400040._000095.pool.root.1
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas      1033 Jun 29 16:38 memory_monitor_summary.json
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas   1574086 Jun 29 16:38 agis_ddmendpoints.agis.ALL.json
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas    346527 Jun 29 16:38 log.45400040._000095.job.log.tgz.1
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas      7815 Jun 29 16:38 heartbeat.json
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas        95 Jun 29 16:38 pilot_heartbeat.json
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas       814 Jun 29 16:38 pilotlog.txt
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas   1320868 Jun 29 16:38 log.45400040._000095.job.log.1
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas       357 Jun 29 16:38 output.list
2025-06-29 17:38:59 (25604): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 29 16:38 runtime_log
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas   1689600 Jun 29 16:38 result.tar.gz
2025-06-29 17:38:59 (25604): Guest Log: -rw-r--r--. 1 atlas atlas      8588 Jun 29 16:38 runtime_log.err
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas       655 Jun 29 16:38 23kKDmo2wp7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmykKDmiqhqwn.diag
2025-06-29 17:38:59 (25604): Guest Log: Looking for outputfile HITS.45400040._000095.pool.root.1
2025-06-29 17:38:59 (25604): Guest Log: HITS file was successfully produced
2025-06-29 17:38:59 (25604): Guest Log: -rw-------. 1 atlas atlas 247242992 Jun 29 16:37 /home/atlas/RunAtlas/HITS.45400040._000095.pool.root.1
2025-06-29 17:39:01 (25604): Guest Log: Successfully finished the ATLAS job!
2025-06-29 17:39:01 (25604): Guest Log: Copying the results back to the shared directory!
2025-06-29 17:39:01 (25604): Guest Log:  *** Contents of shared directory: ***
2025-06-29 17:39:01 (25604): Guest Log: total 535132
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root 298462111 Jun 29 12:14 ATLAS.root_0
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root 247242992 Jun 29 16:39 HITS.pool.root.1
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root      9291 Jun 29 12:14 init_data.xml
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root    542891 Jun 29 02:39 input.tar.gz
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root   1689600 Jun 29 16:39 result.tar.gz
2025-06-29 17:39:01 (25604): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 29 02:39 start_atlas.sh
2025-06-29 17:39:01 (25604): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-29 17:39:01 (25604): VM Completion File Detected.
2025-06-29 17:39:01 (25604): Powering off VM.
2025-06-29 17:39:03 (25604): Successfully stopped VM.
2025-06-29 17:39:03 (25604): Deregistering VM. (boinc_bec09186ae05741b, slot#3)
2025-06-29 17:39:03 (25604): Removing network bandwidth throttle group from VM.
2025-06-29 17:39:03 (25604): Removing VM from VirtualBox.
17:39:08 (25604): called boinc_finish(0)

</stderr_txt>
]]>

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