Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-29 05:23:19 (13568): Detected: vboxwrapper 26206
2025-06-29 05:23:19 (13568): Detected: BOINC client v8.0.2
2025-06-29 05:23:19 (13568): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-06-29 05:23:19 (13568): Successfully copied 'init_data.xml' to the shared directory.
2025-06-29 05:23:20 (13568): Create VM. (boinc_72f28b69ecd2e44d, slot#9)
2025-06-29 05:23:20 (13568): Setting Memory Size for VM. (4700MB)
2025-06-29 05:23:21 (13568): Setting CPU Count for VM. (7)
2025-06-29 05:23:21 (13568): Setting Chipset Options for VM.
2025-06-29 05:23:21 (13568): Setting Graphics Controller Options for VM.
2025-06-29 05:23:21 (13568): Setting Boot Options for VM.
2025-06-29 05:23:22 (13568): Setting Network Configuration for NAT.
2025-06-29 05:23:22 (13568): Enabling VM Network Access.
2025-06-29 05:23:22 (13568): Disabling USB Support for VM.
2025-06-29 05:23:22 (13568): Disabling COM Port Support for VM.
2025-06-29 05:23:23 (13568): Disabling LPT Port Support for VM.
2025-06-29 05:23:23 (13568): Disabling Audio Support for VM.
2025-06-29 05:23:23 (13568): Disabling Clipboard Support for VM.
2025-06-29 05:23:23 (13568): Disabling Drag and Drop Support for VM.
2025-06-29 05:23:24 (13568): Adding storage controller(s) to VM.
2025-06-29 05:23:24 (13568): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-29 05:23:24 (13568): Adding VirtualBox Guest Additions to VM.
2025-06-29 05:23:25 (13568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-29 05:23:25 (13568): forwarding host port 51065 to guest port 80
2025-06-29 05:23:25 (13568): Enabling remote desktop for VM.
2025-06-29 05:23:25 (13568): Required extension pack not installed, remote desktop not enabled.
2025-06-29 05:23:25 (13568): Enabling shared directory for VM.
2025-06-29 05:23:26 (13568): Starting VM using VBoxManage interface. (boinc_72f28b69ecd2e44d, slot#9)
2025-06-29 05:23:30 (13568): Successfully started VM. (PID = '3716')
2025-06-29 05:23:30 (13568): Reporting VM Process ID to BOINC.
2025-06-29 05:23:30 (13568): Guest Log: BIOS: VirtualBox 6.1.50
2025-06-29 05:23:30 (13568): Guest Log: CPUID EDX: 0x178bfbff
2025-06-29 05:23:30 (13568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-29 05:23:30 (13568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-29 05:23:30 (13568): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-29 05:23:30 (13568): Detected: Web Application Enabled (http://localhost:51065)
2025-06-29 05:23:30 (13568): Preference change detected
2025-06-29 05:23:30 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:23:30 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:23:32 (13568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-29 05:23:32 (13568): Guest Log: BIOS: Booting from Hard Disk...
2025-06-29 05:23:35 (13568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-29 05:23:35 (13568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-29 05:23:35 (13568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-29 05:23:42 (13568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-29 05:23:42 (13568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-29 05:23:47 (13568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000143 main     Log opened 2025-06-29T05:23:45.447705000Z
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000224 main     OS Product: Linux
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000248 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000268 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000295 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000295 main     Process ID: 1351
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000296 main     Package type: LINUX_64BITS_GENERIC
2025-06-29 05:23:47 (13568): Guest Log: 00:00:00.000753 main     5.2.32 r132073 started. Verbose level = 0
2025-06-29 05:23:47 (13568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-29 05:23:47 (13568): Guest Log: [INFO] Mounting shared directory
2025-06-29 05:23:47 (13568): Guest Log: [INFO] Checking for init_data.xml
2025-06-29 05:23:49 (13568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-29 05:23:49 (13568): Guest Log: [INFO] Detected branch: prod
2025-06-29 05:23:49 (13568): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-29 05:23:49 (13568): Guest Log: Copying input files
2025-06-29 05:23:50 (13568): Guest Log: Copied input files into RunAtlas.
2025-06-29 05:23:50 (13568): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-29 05:23:50 (13568): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-29 05:23:50 (13568): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-29 05:23:50 (13568): Guest Log: Further information can be found at the LHC@home message board.
2025-06-29 05:23:57 (13568): Guest Log: 00:00:10.002809 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 381 614 000ns (GuestNow=1 751 167 437 067 855 000 ns GuestLast=1 751 174 625 449 469 000 ns fSetTimeLastLoop=true )
2025-06-29 05:23:58 (13568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-29 05:23:58 (13568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-29 05:23:58 (13568): Guest Log: 2.6.3.0 1627 0 30344 147704 4 1 3120515 4096000 0 65024 0 0 n/a 1291 1998 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-29 05:23:59 (13568): Guest Log: copied the webapp to /var/www
2025-06-29 05:23:59 (13568): Guest Log: ATHENA_PROC_NUMBER=7
2025-06-29 05:23:59 (13568): Guest Log: ATHENA_CORE_NUMBER=7
2025-06-29 05:23:59 (13568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-29 05:23:59 (13568): Guest Log:  *** Starting ATLAS job. (PandaID=6712484258 taskID=45368797) ***
2025-06-29 05:24:14 (13568): Preference change detected
2025-06-29 05:24:14 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:24:14 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:25:15 (13568): Preference change detected
2025-06-29 05:25:15 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:25:15 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:25:22 (13568): Preference change detected
2025-06-29 05:25:22 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:25:22 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:26:24 (13568): Preference change detected
2025-06-29 05:26:24 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:26:24 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:27:26 (13568): Preference change detected
2025-06-29 05:27:26 (13568): Setting CPU throttle for VM. (100%)
2025-06-29 05:27:26 (13568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-29 05:28:13 (13568): Guest Log:  *** Job finished ***
2025-06-29 05:28:13 (13568): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:27:54,658 | INFO     | all workflow threads have been joined
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:27:54,658 | INFO     | end of generic workflow (traces error code: 0)
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:27:54,658 | INFO     | traces error code: 0
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:27:54,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,452 | INFO     | PID=5985 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,453 | INFO     | found 0 job(s) in 20 queues
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,453 | INFO     | [monitor] control thread has ended
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,518 [wrapper] ==== pilot stdout END ====
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,522 [wrapper] ==== wrapper stdout RESUME ====
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,525 [wrapper] pilotpid: 5985
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,529 [wrapper] Pilot exit status: 0
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,575 [wrapper] pandaids: 6712484258
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,601 [wrapper] cleanup supervisor_pilot  5991 5986
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,605 [wrapper] Test setup, not cleaning
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,608 [wrapper] apfmon messages muted
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,612 [wrapper] ==== wrapper stdout END ====
2025-06-29 05:28:13 (13568): Guest Log: 2025-06-29 03:28:12,616 [wrapper] ==== wrapper stderr END ====
2025-06-29 05:28:13 (13568): Guest Log:  *** Error codes and diagnostics ***
2025-06-29 05:28:13 (13568): Guest Log:     "exeErrorCode": 0,
2025-06-29 05:28:13 (13568): Guest Log:     "exeErrorDiag": "",
2025-06-29 05:28:13 (13568): Guest Log:     "pilotErrorCode": 1305,
2025-06-29 05:28:13 (13568): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-06-29 05:28:13 (13568): Guest Log:  *** Listing of results directory ***
2025-06-29 05:28:13 (13568): Guest Log: total 3832
2025-06-29 05:28:13 (13568): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jun 29 00:51 pilot3.tar.gz
2025-06-29 05:28:13 (13568): Guest Log: -rwx------. 1 atlas atlas   36245 Jun 29 01:21 runpilot2-wrapper.sh
2025-06-29 05:28:13 (13568): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jun 29 01:21 queuedata.json
2025-06-29 05:28:13 (13568): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jun 29 03:23 start_atlas.sh
2025-06-29 05:28:13 (13568): Guest Log: -rwxr-xr-x. 1 atlas atlas  543072 Jun 29 03:23 input.tar.gz
2025-06-29 05:28:13 (13568): Guest Log: -rwxr-xr-x. 1 atlas atlas    8976 Jun 29 03:23 init_data.xml
2025-06-29 05:28:13 (13568): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 29 03:23 EVNT.45368794._000011.pool.root.1 -> /data/./ATLAS.root_0
2025-06-29 05:28:13 (13568): Guest Log: -rw-r--r--. 1 atlas atlas    2909 Jun 29 03:23 pandaJob.out
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas  970684 Jun 29 03:25 agis_schedconf.cvmfs.json
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas 1574086 Jun 29 03:25 agis_ddmendpoints.agis.ALL.json
2025-06-29 05:28:13 (13568): Guest Log: drwx------. 4 atlas atlas    4096 Jun 29 03:25 pilot3
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas     876 Jun 29 03:25 memory_monitor_summary.json
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas    7917 Jun 29 03:25 log.45368797._001122.job.log.tgz.1
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas    2573 Jun 29 03:27 heartbeat.json
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas      95 Jun 29 03:28 pilot_heartbeat.json
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas     744 Jun 29 03:28 pilotlog.txt
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas   73199 Jun 29 03:28 log.45368797._001122.job.log.1
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas     186 Jun 29 03:28 output.list
2025-06-29 05:28:13 (13568): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jun 29 03:28 runtime_log
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas   92160 Jun 29 03:28 result.tar.gz
2025-06-29 05:28:13 (13568): Guest Log: -rw-r--r--. 1 atlas atlas    8437 Jun 29 03:28 runtime_log.err
2025-06-29 05:28:13 (13568): Guest Log: -rw-------. 1 atlas atlas     639 Jun 29 03:28 HH3NDmAvvp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQ72KDmNpSNPo.diag
2025-06-29 05:28:13 (13568): Guest Log: Looking for outputfile HITS.45368797._001122.pool.root.1
2025-06-29 05:28:13 (13568): Guest Log: No HITS file was produced
2025-06-29 05:28:13 (13568): Guest Log: Successfully finished the ATLAS job!
2025-06-29 05:28:13 (13568): Guest Log: Copying the results back to the shared directory!
2025-06-29 05:28:14 (13568): Guest Log:  *** Contents of shared directory: ***
2025-06-29 05:28:14 (13568): Guest Log: total 319828
2025-06-29 05:28:14 (13568): Guest Log: -rwxrwxrwx. 1 root root 326834444 Jun 29 03:23 ATLAS.root_0
2025-06-29 05:28:14 (13568): Guest Log: -rwxrwxrwx. 1 root root      8976 Jun 29 03:23 init_data.xml
2025-06-29 05:28:14 (13568): Guest Log: -rwxrwxrwx. 1 root root    543072 Jun 29 01:27 input.tar.gz
2025-06-29 05:28:14 (13568): Guest Log: -rwxrwxrwx. 1 root root     92160 Jun 29 03:28 result.tar.gz
2025-06-29 05:28:14 (13568): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 29 01:27 start_atlas.sh
2025-06-29 05:28:14 (13568): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-29 05:28:14 (13568): VM Completion File Detected.
2025-06-29 05:28:14 (13568): Powering off VM.
2025-06-29 05:28:15 (13568): Successfully stopped VM.
2025-06-29 05:28:15 (13568): Deregistering VM. (boinc_72f28b69ecd2e44d, slot#9)
2025-06-29 05:28:15 (13568): Removing network bandwidth throttle group from VM.
2025-06-29 05:28:15 (13568): Removing VM from VirtualBox.
05:28:20 (13568): called boinc_finish(0)

</stderr_txt>
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