Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:30 (3832160): wrapper (7.7.26015): starting
19:46:30 (3832160): wrapper: running run_atlas (--nthreads 8)
[2025-06-28 19:46:30] Arguments: --nthreads 8
[2025-06-28 19:46:30] Threads: 8
[2025-06-28 19:46:30] Checking for CVMFS
[2025-06-28 19:46:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 19:46:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 19:46:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 19:46:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 19:46:35] 2.12.6.0 5673 66741 554632 147647 -1872 865 16760220 32935936 16467 16776704 1 151030786 99.606 162482726 10117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-28 19:46:35] CVMFS is ok
[2025-06-28 19:46:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-28 19:46:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-28 19:46:35] Further information can be found at the LHC@home message board.
[2025-06-28 19:46:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 19:46:35] Checking for apptainer binary...
[2025-06-28 19:46:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 19:46:35] Running /usr/bin/apptainer --version
[2025-06-28 19:46:35] apptainer version 1.4.1-1.el9
[2025-06-28 19:46:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 19:46:37] c6-12-25-3.aglt2.org
[2025-06-28 19:46:37] apptainer works
[2025-06-28 19:46:37] Set ATHENA_PROC_NUMBER=8
[2025-06-28 19:46:37] Set ATHENA_CORE_NUMBER=8
[2025-06-28 19:46:37] Starting ATLAS job with PandaID=6712447934
[2025-06-28 19:46:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-28 19:54:38]  *** The last 200 lines of the pilot log: ***
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . initial setup = 7 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload setup = 37 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . stage-in = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload execution = 52 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . stage-out = 4 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . log creation = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | ..............................
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 19:54:38] 2025-06-28 23:53:58,395 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/pilotlog.txt
[2025-06-28 19:54:38] 2025-06-28 23:53:58,619 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-28 19:54:38] - Log from pilotlog.txt -
[2025-06-28 19:54:38] 2025-06-28 23:53:58,051 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,059 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9994583333333
[2025-06-28 19:54:38] 2025-06-28 23:53:58,348 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,350 | INFO     | extracted standard info from prmon json
[2025-06-28 19:54:38] 2025-06-28 23:53:58,369 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 19:54:38] 2025-06-28 23:53:58,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 19:54:38] 2025-06-28 23:53:58,371 | WARNING  | wrong length of table data, x=[1751154664.0], y=[1434.0] (must be same and length>=4)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,372 | INFO     | could have reported an average CPU frequency of 999 MHz (4 samples)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,372 | INFO     | ..............................
[2025-06-28 19:54:38] 2025-06-28 23:53:58,392 | INFO     | . Timing measurements:
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . get job = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . initial setup = 7 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload setup = 37 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . stage-in = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload execution = 52 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . stage-out = 4 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . log creation = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | ..............................
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 19:54:38] 2025-06-28 23:53:58,395 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/pilotlog.txt
[2025-06-28 19:54:38] 2025-06-28 23:53:58,619 | WARNING  | 
[2025-06-28 19:54:38] [begin log extracts]
[2025-06-28 19:54:38] - Log from pilotlog.txt -
[2025-06-28 19:54:38] 2025-06-28 23:53:58,051 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,059 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9994583333333
[2025-06-28 19:54:38] 2025-06-28 23:53:58,348 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,350 | INFO     | extracted standard info from prmon json
[2025-06-28 19:54:38] 2025-06-28 23:53:58,369 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 19:54:38] 2025-06-28 23:53:58,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 19:54:38] 2025-06-28 23:53:58,371 | WARNING  | wrong length of table data, x=[1751154664.0], y=[1434.0] (must be same and length>=4)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,372 | INFO     | could have reported an average CPU frequency of 999 MHz (4 samples)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,372 | INFO     | ..............................
[2025-06-28 19:54:38] 2025-06-28 23:53:58,392 | INFO     | . Timing measurements:
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . get job = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . initial setup = 7 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload setup = 37 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . stage-in = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,393 | INFO     | . payload execution = 52 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . stage-out = 4 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | . log creation = 0 s
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | ..............................
[2025-06-28 19:54:38] 2025-06-28 23:53:58,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 19:54:38] 2025-06-28 23:53:58,395 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/pilotlog.txt
[2025-06-28 19:54:38] [end log extracts]
[2025-06-28 19:54:38] 2025-06-28 23:53:58,620 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-06-28 19:54:38] 2025-06-28 23:53:58,638 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-06-28 19:54:38] 2025-06-28 23:53:59,779 | INFO     | 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,779 | INFO     | job summary report
[2025-06-28 19:54:38] 2025-06-28 23:53:59,779 | INFO     | --------------------------------------------------
[2025-06-28 19:54:38] 2025-06-28 23:53:59,780 | INFO     | PanDA job id: 6712447934
[2025-06-28 19:54:38] 2025-06-28 23:53:59,780 | INFO     | task id: 45368797
[2025-06-28 19:54:38] 2025-06-28 23:53:59,780 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-06-28 19:54:38] 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,780 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | pilot error code: 1187
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | pilot error diag: metadata does not exist: /tmp/boinchome/slots/0/PanDA_Pilot-6712447934/metadata.xml
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | pilot state: failed 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | transexitcode: 127
[2025-06-28 19:54:38] 2025-06-28 23:53:59,781 | INFO     | exeerrorcode: 0
[2025-06-28 19:54:38] 2025-06-28 23:53:59,782 | INFO     | exeerrordiag: 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,782 | INFO     | exitcode: 0
[2025-06-28 19:54:38] 2025-06-28 23:53:59,782 | INFO     | exitmsg: 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,782 | INFO     | cpuconsumptiontime: 33 s
[2025-06-28 19:54:38] 2025-06-28 23:53:59,789 | INFO     | nevents: 0
[2025-06-28 19:54:38] 2025-06-28 23:53:59,789 | INFO     | neventsw: 0
[2025-06-28 19:54:38] 2025-06-28 23:53:59,790 | INFO     | pid: 3862522
[2025-06-28 19:54:38] 2025-06-28 23:53:59,790 | INFO     | pgrp: 3862522
[2025-06-28 19:54:38] 2025-06-28 23:53:59,790 | INFO     | corecount: 8
[2025-06-28 19:54:38] 2025-06-28 23:53:59,790 | INFO     | event service: False
[2025-06-28 19:54:38] 2025-06-28 23:53:59,790 | INFO     | sizes: {0: 2366382, 1: 2367067, 2: 2367067, 3: 2367095, 4: 2367095, 5: 2367478, 17: 2367478, 28: 2367506, 39: 2367534, 42: 2367824, 51: 2367880, 96: 2372636, 97: 2
[2025-06-28 19:54:38] 2025-06-28 23:53:59,791 | INFO     | --------------------------------------------------
[2025-06-28 19:54:38] 2025-06-28 23:53:59,791 | INFO     | 
[2025-06-28 19:54:38] 2025-06-28 23:53:59,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-28 19:54:38] 2025-06-28 23:53:59,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-28 19:54:38] 2025-06-28 23:53:59,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-28 19:54:38] 2025-06-28 23:53:59,980 | INFO     | job 6712447934 has completed (purged errors)
[2025-06-28 19:54:38] 2025-06-28 23:53:59,980 | INFO     | overall cleanup function is called
[2025-06-28 19:54:38] 2025-06-28 23:54:00,993 | INFO     | --- collectZombieJob: --- 10, [3862522]
[2025-06-28 19:54:38] 2025-06-28 23:54:00,993 | INFO     | zombie collector waiting for pid 3862522
[2025-06-28 19:54:38] 2025-06-28 23:54:00,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-28 19:54:38] 2025-06-28 23:54:00,994 | INFO     | collected zombie processes
[2025-06-28 19:54:38] 2025-06-28 23:54:00,994 | INFO     | will attempt to kill all subprocesses of pid=3862522
[2025-06-28 19:54:38] 2025-06-28 23:54:02,483 | INFO     | PID=3842153 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-28 19:54:38] 2025-06-28 23:54:02,484 | INFO     | .. there are 15 such processes running
[2025-06-28 19:54:38] 2025-06-28 23:54:03,373 | INFO     | process IDs to be killed: [3862522] (in reverse order)
[2025-06-28 19:54:38] 2025-06-28 23:54:03,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-28 19:54:38] 2025-06-28 23:54:03,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-28 19:54:38] 2025-06-28 23:54:03,979 | INFO     | did not find any defunct processes belonging to 3862522
[2025-06-28 19:54:38] 2025-06-28 23:54:04,166 | INFO     | did not find any defunct processes belonging to 3862522
[2025-06-28 19:54:38] 2025-06-28 23:54:04,167 | INFO     | ready for new job
[2025-06-28 19:54:38] 2025-06-28 23:54:04,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-28 19:54:38] 2025-06-28 23:54:04,191 | INFO     | ***************************************
[2025-06-28 19:54:38] 2025-06-28 23:54:04,192 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-28 19:54:38] 2025-06-28 23:54:04,192 | INFO     | ***************************************
[2025-06-28 19:54:38] 2025-06-28 23:54:04,192 | INFO     | 
[2025-06-28 19:54:38] 2025-06-28 23:54:04,292 | INFO     | architecture information:
[2025-06-28 19:54:38] 2025-06-28 23:54:04,313 | INFO     | executing command: cat /etc/os-release
[2025-06-28 19:54:38] 2025-06-28 23:54:04,648 | INFO     | cat /etc/os-release:
[2025-06-28 19:54:38] NAME="CentOS Linux"
[2025-06-28 19:54:38] VERSION="7 (Core)"
[2025-06-28 19:54:38] ID="centos"
[2025-06-28 19:54:38] ID_LIKE="rhel fedora"
[2025-06-28 19:54:38] VERSION_ID="7"
[2025-06-28 19:54:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-28 19:54:38] ANSI_COLOR="0;31"
[2025-06-28 19:54:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-28 19:54:38] HOME_URL="https://www.centos.org/"
[2025-06-28 19:54:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-28 19:54:38] 
[2025-06-28 19:54:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-28 19:54:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-28 19:54:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-28 19:54:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-28 19:54:38] 
[2025-06-28 19:54:38] 2025-06-28 23:54:04,649 | INFO     | ***************************************
[2025-06-28 19:54:38] 2025-06-28 23:54:05,153 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-28 19:54:38] 2025-06-28 23:54:05,364 | INFO     | sufficient remaining disk space (95247400960 B)
[2025-06-28 19:54:38] 2025-06-28 23:54:05,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-28 19:54:38] 2025-06-28 23:54:05,366 | INFO     | current server update state: UPDATING_FINAL
[2025-06-28 19:54:38] 2025-06-28 23:54:05,366 | INFO     | update_server=False
[2025-06-28 19:54:38] 2025-06-28 23:54:05,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-28 19:54:38] 2025-06-28 23:54:05,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-28 19:54:38] 2025-06-28 23:54:05,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-28 19:54:38] 2025-06-28 23:54:05,513 | INFO     | all data control threads have been joined
[2025-06-28 19:54:38] 2025-06-28 23:54:05,645 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-28 19:54:38] 2025-06-28 23:54:05,646 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-28 19:54:38] 2025-06-28 23:54:05,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-28 19:54:38] 2025-06-28 23:54:05,646 | INFO     | will abort loop
[2025-06-28 19:54:38] 2025-06-28 23:54:05,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-28 19:54:38] 2025-06-28 23:54:06,390 | INFO     | [job] retrieve thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:06,396 | INFO     | [job] queue monitor thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:06,520 | INFO     | [data] control thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:06,559 | INFO     | [payload] validate_pre thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:06,652 | INFO     | [job] job monitor thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:06,742 | INFO     | all payload control threads have been joined
[2025-06-28 19:54:38] 2025-06-28 23:54:07,038 | INFO     | all job control threads have been joined
[2025-06-28 19:54:38] 2025-06-28 23:54:07,057 | INFO     | [job] validate thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,082 | INFO     | [job] create_data_payload thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,622 | INFO     | [data] copytool_in thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,629 | INFO     | [payload] execute_payloads thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,748 | INFO     | [payload] control thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,845 | INFO     | [payload] failed_post thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,939 | INFO     | [data] copytool_out thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:07,945 | INFO     | [payload] validate_post thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:08,045 | INFO     | [job] control thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:09,399 | INFO     | [data] queue_monitor thread has finished
[2025-06-28 19:54:38] 2025-06-28 23:54:10,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577381652288)>', '<ExcThread(monitor, started 140576762623744)>']
[2025-06-28 19:54:38] 2025-06-28 23:54:16,003 | INFO     | all workflow threads have been joined
[2025-06-28 19:54:38] 2025-06-28 23:54:16,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-28 19:54:38] 2025-06-28 23:54:16,004 | INFO     | traces error code: 0
[2025-06-28 19:54:38] 2025-06-28 23:54:16,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-28 19:54:38] 2025-06-28 23:54:36,277 | INFO     | PID=3842153 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-28 19:54:38] 2025-06-28 23:54:36,278 | INFO     | .. there are 15 such processes running
[2025-06-28 19:54:38] 2025-06-28 23:54:36,280 | INFO     | found 0 job(s) in 20 queues
[2025-06-28 19:54:38] 2025-06-28 23:54:36,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-28 19:54:38] 2025-06-28 23:54:36,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-28 19:54:38] 2025-06-28 23:54:36,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-28 19:54:38] 2025-06-28 23:54:36,282 | CRITICAL | thread 'MainThread' is not alive
[2025-06-28 19:54:38] 2025-06-28 23:54:36,282 | INFO     | [monitor] control thread has ended
[2025-06-28 19:54:38] 2025-06-28 23:54:37,041 [wrapper] ==== pilot stdout END ====
[2025-06-28 19:54:38] 2025-06-28 23:54:37,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-28 19:54:38] 2025-06-28 23:54:37,053 [wrapper] pilotpid: 3842153
[2025-06-28 19:54:38] 2025-06-28 23:54:37,059 [wrapper] Pilot exit status: 0
[2025-06-28 19:54:38] 2025-06-28 23:54:37,150 [wrapper] pandaids: 6712447934
[2025-06-28 19:54:38] 2025-06-28 23:54:37,728 [wrapper] cleanup supervisor_pilot 3842165 3842154
[2025-06-28 19:54:38] 2025-06-28 23:54:37,747 [wrapper] Test setup, not cleaning
[2025-06-28 19:54:38] 2025-06-28 23:54:37,792 [wrapper] apfmon messages muted
[2025-06-28 19:54:38] 2025-06-28 23:54:37,812 [wrapper] ==== wrapper stdout END ====
[2025-06-28 19:54:38] 2025-06-28 23:54:37,860 [wrapper] ==== wrapper stderr END ====
[2025-06-28 19:54:38]  *** Error codes and diagnostics ***
[2025-06-28 19:54:38]     "exeErrorCode": 0,
[2025-06-28 19:54:38]     "exeErrorDiag": "",
[2025-06-28 19:54:38]     "pilotErrorCode": 1305,
[2025-06-28 19:54:38]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-06-28 19:54:38]  *** Listing of results directory ***
[2025-06-28 19:54:38] total 330076
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas      5112 Jun 28 19:23 queuedata.json
[2025-06-28 19:54:38] -rwx------. 1 boincer umatlas     36245 Jun 28 19:26 runpilot2-wrapper.sh
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas    530466 Jun 28 19:26 pilot3.tar.gz
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas       100 Jun 28 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-28 19:54:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 28 19:46 run_atlas
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas       105 Jun 28 19:46 job.xml
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas 333967065 Jun 28 19:46 EVNT.45368794._000015.pool.root.1
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas      6851 Jun 28 19:46 init_data.xml
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas     15095 Jun 28 19:46 start_atlas.sh
[2025-06-28 19:54:38] drwxrwx--x. 2 boincer umatlas      4096 Jun 28 19:46 shared
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas    543074 Jun 28 19:46 input.tar.gz
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas         0 Jun 28 19:46 boinc_lockfile
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas      2910 Jun 28 19:46 pandaJob.out
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas    967042 Jun 28 19:48 agis_schedconf.cvmfs.json
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas   1574086 Jun 28 19:48 agis_ddmendpoints.agis.ALL.json
[2025-06-28 19:54:38] drwx------. 4 boincer umatlas      4096 Jun 28 19:48 pilot3
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas       973 Jun 28 19:51 memory_monitor_summary.json
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas      9204 Jun 28 19:51 log.45368797._001106.job.log.tgz.1
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas      2677 Jun 28 19:53 heartbeat.json
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas      8192 Jun 28 19:54 boinc_mmap_file
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas        23 Jun 28 19:54 wrapper_checkpoint.txt
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas       523 Jun 28 19:54 boinc_task_state.xml
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas        95 Jun 28 19:54 pilot_heartbeat.json
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas       893 Jun 28 19:54 pilotlog.txt
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas     86041 Jun 28 19:54 log.45368797._001106.job.log.1
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas       186 Jun 28 19:54 output.list
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas       620 Jun 28 19:54 runtime_log
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas    112640 Jun 28 19:54 result.tar.gz
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas      8517 Jun 28 19:54 runtime_log.err
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas       640 Jun 28 19:54 oONMDm16tp7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJhkKDmvlcVtn.diag
[2025-06-28 19:54:38] -rw-r--r--. 1 boincer umatlas     21816 Jun 28 19:54 stderr.txt
[2025-06-28 19:54:38] No HITS result produced
[2025-06-28 19:54:38]  *** Contents of shared directory: ***
[2025-06-28 19:54:38] total 326804
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas 333967065 Jun 28 19:46 ATLAS.root_0
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas     15095 Jun 28 19:46 start_atlas.sh
[2025-06-28 19:54:38] -rw-r--r--. 2 boincer umatlas    543074 Jun 28 19:46 input.tar.gz
[2025-06-28 19:54:38] -rw-------. 1 boincer umatlas    112640 Jun 28 19:54 result.tar.gz
19:54:40 (3832160): run_atlas exited; CPU time 64.638189
19:54:40 (3832160): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN