Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:15:59 (15180): wrapper (7.7.26015): starting
12:15:59 (15180): wrapper: running run_atlas (--nthreads 8)
[2025-06-28 12:15:59] Arguments: --nthreads 8
[2025-06-28 12:15:59] Threads: 8
[2025-06-28 12:15:59] Checking for CVMFS
[2025-06-28 12:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 12:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 12:15:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 12:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 12:15:59] 2.11.2.0 6410 67598 124368 147676 2 63 24672117 25165824 414 130560 0 34152231 99.794 41583577 3553 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-28 12:15:59] CVMFS is ok
[2025-06-28 12:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 12:15:59] Checking for apptainer binary...
[2025-06-28 12:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 12:15:59] Running /usr/bin/apptainer --version
[2025-06-28 12:15:59] apptainer version 1.3.2-1.el7
[2025-06-28 12:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 12:16:00] cg-vwn284.simple-grid.lan
[2025-06-28 12:16:00] apptainer works
[2025-06-28 12:16:00] Set ATHENA_PROC_NUMBER=8
[2025-06-28 12:16:00] Set ATHENA_CORE_NUMBER=8
[2025-06-28 12:16:00] Starting ATLAS job with PandaID=6711891485
[2025-06-28 12:16:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-28 13:45:50]  *** The last 200 lines of the pilot log: ***
[2025-06-28 13:45:50]  mtime=0
[2025-06-28 13:45:50]  protocol_id=None
[2025-06-28 13:45:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-28 13:45:50]  replicas=None
[2025-06-28 13:45:50]  scope=mc23_13p6TeV
[2025-06-28 13:45:50]  status=None
[2025-06-28 13:45:50]  status_code=0
[2025-06-28 13:45:50]  storage_token=
[2025-06-28 13:45:50]  surl=/var/lib/boinc/slots/12/PanDA_Pilot-6711891485/log.45388968._000091.job.log.tgz.1
[2025-06-28 13:45:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/4a/log.45388968._000091.job.log.tgz.1
[2025-06-28 13:45:50]  workdir=None
[2025-06-28 13:45:50] ]
[2025-06-28 13:45:50] 2025-06-28 11:45:10,541 | INFO     | transferring file log.45388968._000091.job.log.tgz.1 from /var/lib/boinc/slots/12/PanDA_Pilot-6711891485/log.45388968._000091.job.log.tgz.1 to /var/lib/boinc/slots
[2025-06-28 13:45:50] 2025-06-28 11:45:10,541 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-6711891485/log.45388968._000091.job.log.tgz.1 /var/lib/boinc/slots/12/log.45388968._000091.j
[2025-06-28 13:45:50] 2025-06-28 11:45:10,554 | INFO     | adding to output.list: log.45388968._000091.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/4a/log.45388968._000091.job.log.tg
[2025-06-28 13:45:50] 2025-06-28 11:45:10,555 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-28 13:45:50] 2025-06-28 11:45:10,555 | INFO     | summary of transferred files:
[2025-06-28 13:45:50] 2025-06-28 11:45:10,555 | INFO     |  -- lfn=log.45388968._000091.job.log.tgz.1, status_code=0, status=transferred
[2025-06-28 13:45:50] 2025-06-28 11:45:10,555 | INFO     | stage-out finished correctly
[2025-06-28 13:45:50] 2025-06-28 11:45:11,919 | INFO     | monitor loop #374: job 0:6711891485 is in state 'finished'
[2025-06-28 13:45:50] 2025-06-28 11:45:11,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-28 13:45:50] 2025-06-28 11:45:12,090 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-28 13:45:50] 2025-06-28 11:45:14,423 | INFO     | monitor loop #375: job 0:6711891485 is in state 'finished'
[2025-06-28 13:45:50] 2025-06-28 11:45:14,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-28 13:45:50] 2025-06-28 11:45:14,820 | INFO     | job 6711891485 has state=finished
[2025-06-28 13:45:50] 2025-06-28 11:45:14,820 | INFO     | preparing for final server update for job 6711891485 in state='finished'
[2025-06-28 13:45:50] 2025-06-28 11:45:14,821 | INFO     | this job has now completed (state=finished)
[2025-06-28 13:45:50] 2025-06-28 11:45:14,821 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-28 13:45:50] 2025-06-28 11:45:14,821 | INFO     | log transfer has been attempted: DONE
[2025-06-28 13:45:50] 2025-06-28 11:45:14,821 | INFO     | job 6711891485 has finished - writing final server update
[2025-06-28 13:45:50] 2025-06-28 11:45:14,822 | INFO     | total number of processed events: 400 (read)
[2025-06-28 13:45:50] 2025-06-28 11:45:14,822 | INFO     | executing command: lscpu
[2025-06-28 13:45:50] 2025-06-28 11:45:14,837 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-28 13:45:50] 2025-06-28 11:45:16,925 | INFO     | monitor loop #376: job 0:6711891485 is in state 'finished'
[2025-06-28 13:45:50] 2025-06-28 11:45:16,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,080 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-28 13:45:50] 2025-06-28 11:45:18,081 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-06-28 13:45:50] 2025-06-28 11:45:18,082 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6711891485/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,082 | INFO     | extracted standard info from prmon json
[2025-06-28 13:45:50] 2025-06-28 11:45:18,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 13:45:50] 2025-06-28 11:45:18,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 13:45:50] 2025-06-28 11:45:18,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-28 13:45:50] 2025-06-28 11:45:18,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-28 13:45:50] 2025-06-28 11:45:18,084 | INFO     | fitting pss+swap vs Time
[2025-06-28 13:45:50] 2025-06-28 11:45:18,084 | INFO     | sum of square deviations: 164765880.0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | sum of deviations: -8775031902.0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | mean x: 1751108537.0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | mean y: 2603703.4938271604
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | -- intersect: 93262405284.01248
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | intersect: 93262405284.01248
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | chi2: 0.07347779738135979
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | -- intersect: 93262405284.01248
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | current memory leak: -53.26 B/s (using 81 data points, chi2=0.07)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | could have reported an average CPU frequency of 1999 MHz (6 samples)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,085 | INFO     | ..............................
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . Timing measurements:
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . get job = 0 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . initial setup = 1 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . payload setup = 5 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . stage-in = 0 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . payload execution = 5319 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . stage-out = 0 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | . log creation = 0 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,086 | INFO     | ..............................
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | 
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | job summary report
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | --------------------------------------------------
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | PanDA job id: 6711891485
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | task id: 45388968
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | errors: (none)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | pilot state: finished 
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | transexitcode: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | exeerrorcode: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | exeerrordiag: 
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | exitcode: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | exitmsg: OK
[2025-06-28 13:45:50] 2025-06-28 11:45:18,151 | INFO     | cpuconsumptiontime: 35151 s
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | nevents: 400
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | neventsw: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | pid: 25344
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | pgrp: 25344
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | corecount: 8
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | event service: False
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | sizes: {0: 2366670, 3: 2366932, 11: 2366960, 5328: 2393455, 5329: 2402455, 5331: 2402511, 5337: 2402833}
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | --------------------------------------------------
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | 
[2025-06-28 13:45:50] 2025-06-28 11:45:18,152 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-28 13:45:50] 2025-06-28 11:45:18,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-28 13:45:50] 2025-06-28 11:45:18,167 | INFO     | job 6711891485 has completed (purged errors)
[2025-06-28 13:45:50] 2025-06-28 11:45:18,167 | INFO     | overall cleanup function is called
[2025-06-28 13:45:50] 2025-06-28 11:45:19,173 | INFO     | --- collectZombieJob: --- 10, [25344]
[2025-06-28 13:45:50] 2025-06-28 11:45:19,174 | INFO     | zombie collector waiting for pid 25344
[2025-06-28 13:45:50] 2025-06-28 11:45:19,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-28 13:45:50] 2025-06-28 11:45:19,174 | INFO     | collected zombie processes
[2025-06-28 13:45:50] 2025-06-28 11:45:19,174 | INFO     | will attempt to kill all subprocesses of pid=25344
[2025-06-28 13:45:50] 2025-06-28 11:45:19,210 | INFO     | process IDs to be killed: [25344] (in reverse order)
[2025-06-28 13:45:50] 2025-06-28 11:45:19,238 | WARNING  | found no corresponding commands to process id(s)
[2025-06-28 13:45:50] 2025-06-28 11:45:19,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-28 13:45:50] 2025-06-28 11:45:19,240 | INFO     | did not find any defunct processes belonging to 25344
[2025-06-28 13:45:50] 2025-06-28 11:45:19,241 | INFO     | did not find any defunct processes belonging to 25344
[2025-06-28 13:45:50] 2025-06-28 11:45:19,241 | INFO     | ready for new job
[2025-06-28 13:45:50] 2025-06-28 11:45:19,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-28 13:45:50] 2025-06-28 11:45:19,242 | INFO     | ***************************************
[2025-06-28 13:45:50] 2025-06-28 11:45:19,242 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-28 13:45:50] 2025-06-28 11:45:19,242 | INFO     | ***************************************
[2025-06-28 13:45:50] 2025-06-28 11:45:19,242 | INFO     | 
[2025-06-28 13:45:50] 2025-06-28 11:45:19,243 | INFO     | pilot is running in a VM
[2025-06-28 13:45:50] 2025-06-28 11:45:19,243 | INFO     | architecture information:
[2025-06-28 13:45:50] 2025-06-28 11:45:19,243 | INFO     | executing command: cat /etc/os-release
[2025-06-28 13:45:50] 2025-06-28 11:45:19,251 | INFO     | cat /etc/os-release:
[2025-06-28 13:45:50] NAME="CentOS Linux"
[2025-06-28 13:45:50] VERSION="7 (Core)"
[2025-06-28 13:45:50] ID="centos"
[2025-06-28 13:45:50] ID_LIKE="rhel fedora"
[2025-06-28 13:45:50] VERSION_ID="7"
[2025-06-28 13:45:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-28 13:45:50] ANSI_COLOR="0;31"
[2025-06-28 13:45:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-28 13:45:50] HOME_URL="https://www.centos.org/"
[2025-06-28 13:45:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-28 13:45:50] 
[2025-06-28 13:45:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-28 13:45:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-28 13:45:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-28 13:45:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-28 13:45:50] 
[2025-06-28 13:45:50] 2025-06-28 11:45:19,252 | INFO     | ***************************************
[2025-06-28 13:45:50] 2025-06-28 11:45:19,754 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | INFO     | sufficient remaining disk space (494876491776 B)
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | INFO     | current server update state: UPDATING_FINAL
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | INFO     | update_server=False
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-28 13:45:50] 2025-06-28 11:45:19,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-28 13:45:50] 2025-06-28 11:45:20,056 | INFO     | all job control threads have been joined
[2025-06-28 13:45:50] 2025-06-28 11:45:20,060 | INFO     | all data control threads have been joined
[2025-06-28 13:45:50] 2025-06-28 11:45:20,263 | INFO     | all payload control threads have been joined
[2025-06-28 13:45:50] 2025-06-28 11:45:20,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-28 13:45:50] 2025-06-28 11:45:20,433 | INFO     | aborting loop
[2025-06-28 13:45:50] 2025-06-28 11:45:20,770 | INFO     | [job] retrieve thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:20,771 | INFO     | [job] queue monitor thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,008 | INFO     | [job] validate thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,062 | INFO     | [job] control thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,065 | INFO     | [data] control thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-28 13:45:50] 2025-06-28 11:45:21,269 | INFO     | [payload] control thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,422 | INFO     | [payload] execute_payloads thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,439 | INFO     | [job] job monitor thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,510 | INFO     | [payload] failed_post thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,641 | INFO     | [job] create_data_payload thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,727 | INFO     | [payload] validate_pre thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:21,977 | INFO     | [data] copytool_in thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:22,201 | INFO     | [payload] validate_post thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:22,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-28 13:45:50] 2025-06-28 11:45:23,144 | INFO     | [data] copytool_out thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:26,676 | INFO     | [data] queue_monitor thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:29,926 | INFO     | job.realtimelogging is not enabled
[2025-06-28 13:45:50] 2025-06-28 11:45:30,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-28 13:45:50] 2025-06-28 11:45:32,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773230577472)>', '<ExcThread(monitor, started 139772630644480)>']
[2025-06-28 13:45:50] 2025-06-28 11:45:37,145 | INFO     | all workflow threads have been joined
[2025-06-28 13:45:50] 2025-06-28 11:45:37,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-28 13:45:50] 2025-06-28 11:45:37,146 | INFO     | traces error code: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:37,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | INFO     | PID=18847 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | INFO     | .. there are 2 such processes running
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | INFO     | found 0 job(s) in 20 queues
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-28 13:45:50] 2025-06-28 11:45:50,133 | INFO     | [monitor] control thread has ended
[2025-06-28 13:45:50] 2025-06-28 11:45:50,209 [wrapper] ==== pilot stdout END ====
[2025-06-28 13:45:50] 2025-06-28 11:45:50,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-28 13:45:50] 2025-06-28 11:45:50,213 [wrapper] pilotpid: 18847
[2025-06-28 13:45:50] 2025-06-28 11:45:50,215 [wrapper] Pilot exit status: 0
[2025-06-28 13:45:50] 2025-06-28 11:45:50,224 [wrapper] pandaids: 6711891485
[2025-06-28 13:45:50] 2025-06-28 11:45:50,246 [wrapper] cleanup supervisor_pilot  4832 18848
[2025-06-28 13:45:50] 2025-06-28 11:45:50,248 [wrapper] Test setup, not cleaning
[2025-06-28 13:45:50] 2025-06-28 11:45:50,252 [wrapper] apfmon messages muted
[2025-06-28 13:45:50] 2025-06-28 11:45:50,254 [wrapper] ==== wrapper stdout END ====
[2025-06-28 13:45:50] 2025-06-28 11:45:50,257 [wrapper] ==== wrapper stderr END ====
[2025-06-28 13:45:50]  *** Error codes and diagnostics ***
[2025-06-28 13:45:50]     "exeErrorCode": 0,
[2025-06-28 13:45:50]     "exeErrorDiag": "",
[2025-06-28 13:45:50]     "pilotErrorCode": 0,
[2025-06-28 13:45:50]     "pilotErrorDiag": "",
[2025-06-28 13:45:50]  *** Listing of results directory ***
[2025-06-28 13:45:50] total 516580
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc    530466 Jun 28 10:22 pilot3.tar.gz
[2025-06-28 13:45:50] -rwx------. 1 boinc boinc     36245 Jun 28 10:42 runpilot2-wrapper.sh
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc      5112 Jun 28 10:42 queuedata.json
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc       100 Jun 28 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-28 13:45:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun 28 12:15 run_atlas
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc       105 Jun 28 12:15 job.xml
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc      6391 Jun 28 12:15 init_data.xml
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc 289727102 Jun 28 12:15 EVNT.45388966._000004.pool.root.1
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc     15095 Jun 28 12:15 start_atlas.sh
[2025-06-28 13:45:50] drwxrwx--x. 2 boinc boinc        68 Jun 28 12:15 shared
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc    542885 Jun 28 12:15 input.tar.gz
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc         0 Jun 28 12:15 boinc_lockfile
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc      2615 Jun 28 12:16 pandaJob.out
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc    970684 Jun 28 12:16 agis_schedconf.cvmfs.json
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc   1574086 Jun 28 12:16 agis_ddmendpoints.agis.ALL.json
[2025-06-28 13:45:50] drwx------. 4 boinc boinc      4096 Jun 28 12:16 pilot3
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc 233787795 Jun 28 13:44 HITS.45388968._000091.pool.root.1
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc       529 Jun 28 13:44 boinc_task_state.xml
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc        95 Jun 28 13:44 pilot_heartbeat.json
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc      1017 Jun 28 13:45 memory_monitor_summary.json
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc    312058 Jun 28 13:45 log.45388968._000091.job.log.tgz.1
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc      7767 Jun 28 13:45 heartbeat.json
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc      8192 Jun 28 13:45 boinc_mmap_file
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc        27 Jun 28 13:45 wrapper_checkpoint.txt
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc       820 Jun 28 13:45 pilotlog.txt
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc    501118 Jun 28 13:45 log.45388968._000091.job.log.1
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc       357 Jun 28 13:45 output.list
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc       620 Jun 28 13:45 runtime_log
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc    829440 Jun 28 13:45 result.tar.gz
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc      8673 Jun 28 13:45 runtime_log.err
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc       651 Jun 28 13:45 FkoMDmaJgp7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiXkKDmhpzTHo.diag
[2025-06-28 13:45:50] -rw-r--r--. 1 boinc boinc     21337 Jun 28 13:45 stderr.txt
[2025-06-28 13:45:50] HITS file was successfully produced:
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc 233787795 Jun 28 13:44 shared/HITS.pool.root.1
[2025-06-28 13:45:50]  *** Contents of shared directory: ***
[2025-06-28 13:45:50] total 512612
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc 289727102 Jun 28 12:15 ATLAS.root_0
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc     15095 Jun 28 12:15 start_atlas.sh
[2025-06-28 13:45:50] -rw-r--r--. 2 boinc boinc    542885 Jun 28 12:15 input.tar.gz
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc 233787795 Jun 28 13:44 HITS.pool.root.1
[2025-06-28 13:45:50] -rw-------. 1 boinc boinc    829440 Jun 28 13:45 result.tar.gz
13:45:52 (15180): run_atlas exited; CPU time 35172.447806
13:45:52 (15180): called boinc_finish(0)

</stderr_txt>
]]>

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