Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:42:28 (18951): wrapper (7.7.26015): starting
04:42:28 (18951): wrapper: running run_atlas (--nthreads 12)
[2025-06-28 04:42:28] Arguments: --nthreads 12
[2025-06-28 04:42:28] Threads: 12
[2025-06-28 04:42:28] Checking for CVMFS
[2025-06-28 04:42:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 04:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 04:42:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 04:42:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 04:42:29] 2.11.2.0 2924 69970 96272 147674 2 57 12795872 20275200 1 130560 0 24921225 99.964 8879370 10113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-28 04:42:29] CVMFS is ok
[2025-06-28 04:42:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-28 04:42:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-28 04:42:29] Further information can be found at the LHC@home message board.
[2025-06-28 04:42:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 04:42:29] Checking for apptainer binary...
[2025-06-28 04:42:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 04:42:29] Running /usr/bin/apptainer --version
[2025-06-28 04:42:29] apptainer version 1.3.2-1.el7
[2025-06-28 04:42:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 04:42:30] c-205-28.aglt2.org
[2025-06-28 04:42:30] apptainer works
[2025-06-28 04:42:30] Set ATHENA_PROC_NUMBER=12
[2025-06-28 04:42:30] Set ATHENA_CORE_NUMBER=12
[2025-06-28 04:42:30] Starting ATLAS job with PandaID=6711891482
[2025-06-28 04:42:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-28 06:14:38]  *** The last 200 lines of the pilot log: ***
[2025-06-28 06:14:38]  status_code=0
[2025-06-28 06:14:38]  storage_token=
[2025-06-28 06:14:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6711891482/log.45388968._000088.job.log.tgz.1
[2025-06-28 06:14:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/40/log.45388968._000088.job.log.tgz.1
[2025-06-28 06:14:38]  workdir=None
[2025-06-28 06:14:38] ]
[2025-06-28 06:14:38] 2025-06-28 10:14:00,775 | INFO     | transferring file log.45388968._000088.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/log.45388968._000088.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-28 06:14:38] 2025-06-28 10:14:00,776 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/log.45388968._000088.job.log.tgz.1 /tmp/boinchome/slots/0/log.45388968._000088.job
[2025-06-28 06:14:38] 2025-06-28 10:14:00,800 | INFO     | adding to output.list: log.45388968._000088.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/40/log.45388968._000088.job.log.tg
[2025-06-28 06:14:38] 2025-06-28 10:14:00,801 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-28 06:14:38] 2025-06-28 10:14:00,802 | INFO     | summary of transferred files:
[2025-06-28 06:14:38] 2025-06-28 10:14:00,802 | INFO     |  -- lfn=log.45388968._000088.job.log.tgz.1, status_code=0, status=transferred
[2025-06-28 06:14:38] 2025-06-28 10:14:00,802 | INFO     | stage-out finished correctly
[2025-06-28 06:14:38] 2025-06-28 10:14:00,982 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-28 06:14:38] 2025-06-28 10:14:01,062 | INFO     | job 6711891482 has state=finished
[2025-06-28 06:14:38] 2025-06-28 10:14:01,063 | INFO     | preparing for final server update for job 6711891482 in state='finished'
[2025-06-28 06:14:38] 2025-06-28 10:14:01,063 | INFO     | this job has now completed (state=finished)
[2025-06-28 06:14:38] 2025-06-28 10:14:01,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-28 06:14:38] 2025-06-28 10:14:01,064 | INFO     | log transfer has been attempted: DONE
[2025-06-28 06:14:38] 2025-06-28 10:14:01,064 | INFO     | job 6711891482 has finished - writing final server update
[2025-06-28 06:14:38] 2025-06-28 10:14:01,064 | INFO     | total number of processed events: 400 (read)
[2025-06-28 06:14:38] 2025-06-28 10:14:01,065 | INFO     | executing command: lscpu
[2025-06-28 06:14:38] 2025-06-28 10:14:01,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-28 06:14:38] 2025-06-28 10:14:03,366 | WARNING  | process 29465 can no longer be monitored (due to stat problems) - aborting
[2025-06-28 06:14:38] 2025-06-28 10:14:03,366 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 06:14:38] 2025-06-28 10:14:03,367 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 06:14:38] 2025-06-28 10:14:03,368 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4196951 B
[2025-06-28 06:14:38] 2025-06-28 10:14:03,368 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16253 B
[2025-06-28 06:14:38] 2025-06-28 10:14:03,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,283 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-28 06:14:38] 2025-06-28 10:14:06,290 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-06-28 06:14:38] 2025-06-28 10:14:06,294 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,295 | INFO     | extracted standard info from prmon json
[2025-06-28 06:14:38] 2025-06-28 10:14:06,295 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 06:14:38] 2025-06-28 10:14:06,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 06:14:38] 2025-06-28 10:14:06,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-28 06:14:38] 2025-06-28 10:14:06,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-28 06:14:38] 2025-06-28 10:14:06,298 | INFO     | fitting pss+swap vs Time
[2025-06-28 06:14:38] 2025-06-28 10:14:06,298 | INFO     | sum of square deviations: 177275882.0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,299 | INFO     | sum of deviations: -12326191432.0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,299 | INFO     | mean x: 1751103001.0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,299 | INFO     | mean y: 2827011.301204819
[2025-06-28 06:14:38] 2025-06-28 10:14:06,299 | INFO     | -- intersect: 121758987883.06429
[2025-06-28 06:14:38] 2025-06-28 10:14:06,300 | INFO     | intersect: 121758987883.06429
[2025-06-28 06:14:38] 2025-06-28 10:14:06,300 | INFO     | chi2: 0.06608713010633362
[2025-06-28 06:14:38] 2025-06-28 10:14:06,300 | INFO     | -- intersect: 121758987883.06429
[2025-06-28 06:14:38] 2025-06-28 10:14:06,300 | INFO     | current memory leak: -69.53 B/s (using 83 data points, chi2=0.07)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,301 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,301 | INFO     | ..............................
[2025-06-28 06:14:38] 2025-06-28 10:14:06,301 | INFO     | . Timing measurements:
[2025-06-28 06:14:38] 2025-06-28 10:14:06,301 | INFO     | . get job = 0 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,301 | INFO     | . initial setup = 2 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | . payload setup = 9 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | . stage-in = 0 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | . payload execution = 5446 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | . stage-out = 0 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | . log creation = 0 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,302 | INFO     | ..............................
[2025-06-28 06:14:38] 2025-06-28 10:14:06,303 | INFO     | sufficient remaining disk space (29203890176 B)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,304 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,386 | INFO     | 
[2025-06-28 06:14:38] 2025-06-28 10:14:06,387 | INFO     | job summary report
[2025-06-28 06:14:38] 2025-06-28 10:14:06,387 | INFO     | --------------------------------------------------
[2025-06-28 06:14:38] 2025-06-28 10:14:06,388 | INFO     | PanDA job id: 6711891482
[2025-06-28 06:14:38] 2025-06-28 10:14:06,388 | INFO     | task id: 45388968
[2025-06-28 06:14:38] 2025-06-28 10:14:06,388 | INFO     | errors: (none)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-28 06:14:38] 2025-06-28 10:14:06,389 | INFO     | pilot state: finished 
[2025-06-28 06:14:38] 2025-06-28 10:14:06,389 | INFO     | transexitcode: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,389 | INFO     | exeerrorcode: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,389 | INFO     | exeerrordiag: 
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | exitcode: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | exitmsg: OK
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | cpuconsumptiontime: 60359 s
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | nevents: 400
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | neventsw: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,390 | INFO     | pid: 29465
[2025-06-28 06:14:38] 2025-06-28 10:14:06,391 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6711891482: 4502015 B (within 2537553920 B limit)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,391 | INFO     | pgrp: 29465
[2025-06-28 06:14:38] 2025-06-28 10:14:06,391 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6711891482/HITS.45388968._000088.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,391 | INFO     | corecount: 12
[2025-06-28 06:14:38] 2025-06-28 10:14:06,392 | INFO     | total size of present files: 0 B (workdir size: 4502015 B)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,392 | INFO     | event service: False
[2025-06-28 06:14:38] 2025-06-28 10:14:06,392 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6711891482/HITS.45388968._000088.pool.root.1 since it does not exist
[2025-06-28 06:14:38] 2025-06-28 10:14:06,392 | INFO     | sizes: {0: 2366669, 5: 2366931, 11: 2366987, 5460: 2393538, 5461: 2402592, 5466: 2402730}
[2025-06-28 06:14:38] 2025-06-28 10:14:06,393 | INFO     | --------------------------------------------------
[2025-06-28 06:14:38] 2025-06-28 10:14:06,393 | INFO     | 
[2025-06-28 06:14:38] 2025-06-28 10:14:06,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-28 06:14:38] 2025-06-28 10:14:06,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-28 06:14:38] 2025-06-28 10:14:06,421 | INFO     | job 6711891482 has completed (purged errors)
[2025-06-28 06:14:38] 2025-06-28 10:14:06,422 | INFO     | overall cleanup function is called
[2025-06-28 06:14:38] 2025-06-28 10:14:06,497 | INFO     | number of running child processes to parent process 29465: 1
[2025-06-28 06:14:38] 2025-06-28 10:14:06,497 | INFO     | maximum number of monitored processes: 6
[2025-06-28 06:14:38] 2025-06-28 10:14:06,497 | INFO     | aborting job monitoring since job object (job id=6711891482) has expired
[2025-06-28 06:14:38] 2025-06-28 10:14:07,430 | INFO     | --- collectZombieJob: --- 10, [29465]
[2025-06-28 06:14:38] 2025-06-28 10:14:07,431 | INFO     | zombie collector waiting for pid 29465
[2025-06-28 06:14:38] 2025-06-28 10:14:07,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-28 06:14:38] 2025-06-28 10:14:07,431 | INFO     | collected zombie processes
[2025-06-28 06:14:38] 2025-06-28 10:14:07,431 | INFO     | will attempt to kill all subprocesses of pid=29465
[2025-06-28 06:14:38] 2025-06-28 10:14:07,523 | INFO     | process IDs to be killed: [29465] (in reverse order)
[2025-06-28 06:14:38] 2025-06-28 10:14:07,573 | WARNING  | found no corresponding commands to process id(s)
[2025-06-28 06:14:38] 2025-06-28 10:14:07,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-28 06:14:38] 2025-06-28 10:14:07,577 | INFO     | did not find any defunct processes belonging to 29465
[2025-06-28 06:14:38] 2025-06-28 10:14:07,580 | INFO     | did not find any defunct processes belonging to 29465
[2025-06-28 06:14:38] 2025-06-28 10:14:07,580 | INFO     | ready for new job
[2025-06-28 06:14:38] 2025-06-28 10:14:07,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-28 06:14:38] 2025-06-28 10:14:07,581 | INFO     | ***************************************
[2025-06-28 06:14:38] 2025-06-28 10:14:07,581 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-28 06:14:38] 2025-06-28 10:14:07,582 | INFO     | ***************************************
[2025-06-28 06:14:38] 2025-06-28 10:14:07,582 | INFO     | 
[2025-06-28 06:14:38] 2025-06-28 10:14:07,582 | INFO     | architecture information:
[2025-06-28 06:14:38] 2025-06-28 10:14:07,583 | INFO     | executing command: cat /etc/os-release
[2025-06-28 06:14:38] 2025-06-28 10:14:07,598 | INFO     | cat /etc/os-release:
[2025-06-28 06:14:38] NAME="CentOS Linux"
[2025-06-28 06:14:38] VERSION="7 (Core)"
[2025-06-28 06:14:38] ID="centos"
[2025-06-28 06:14:38] ID_LIKE="rhel fedora"
[2025-06-28 06:14:38] VERSION_ID="7"
[2025-06-28 06:14:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-28 06:14:38] ANSI_COLOR="0;31"
[2025-06-28 06:14:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-28 06:14:38] HOME_URL="https://www.centos.org/"
[2025-06-28 06:14:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-28 06:14:38] 
[2025-06-28 06:14:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-28 06:14:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-28 06:14:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-28 06:14:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-28 06:14:38] 
[2025-06-28 06:14:38] 2025-06-28 10:14:07,598 | INFO     | ***************************************
[2025-06-28 06:14:38] 2025-06-28 10:14:08,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-28 06:14:38] 2025-06-28 10:14:08,119 | INFO     | sufficient remaining disk space (29209133056 B)
[2025-06-28 06:14:38] 2025-06-28 10:14:08,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-28 06:14:38] 2025-06-28 10:14:08,119 | INFO     | current server update state: UPDATING_FINAL
[2025-06-28 06:14:38] 2025-06-28 10:14:08,120 | INFO     | update_server=False
[2025-06-28 06:14:38] 2025-06-28 10:14:08,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-28 06:14:38] 2025-06-28 10:14:08,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-28 06:14:38] 2025-06-28 10:14:08,120 | INFO     | aborting loop
[2025-06-28 06:14:38] 2025-06-28 10:14:08,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-28 06:14:38] 2025-06-28 10:14:08,212 | INFO     | all data control threads have been joined
[2025-06-28 06:14:38] 2025-06-28 10:14:08,391 | INFO     | all payload control threads have been joined
[2025-06-28 06:14:38] 2025-06-28 10:14:08,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-28 06:14:38] 2025-06-28 10:14:09,125 | INFO     | [job] retrieve thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,126 | INFO     | [job] job monitor thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,127 | INFO     | [job] queue monitor thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,218 | INFO     | [data] control thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,227 | INFO     | [data] copytool_in thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,397 | INFO     | [payload] control thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,524 | INFO     | [payload] execute_payloads thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,763 | INFO     | all job control threads have been joined
[2025-06-28 06:14:38] 2025-06-28 10:14:09,953 | INFO     | [payload] failed_post thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:09,994 | INFO     | [job] validate thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,249 | INFO     | [payload] validate_pre thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,249 | INFO     | [job] create_data_payload thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,616 | INFO     | [payload] validate_post thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,768 | INFO     | [job] control thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:10,906 | INFO     | [data] copytool_out thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:11,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-28 06:14:38] 2025-06-28 10:14:15,573 | INFO     | [data] queue_monitor thread has finished
[2025-06-28 06:14:38] 2025-06-28 10:14:15,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486135392064)>', '<ExcThread(monitor, started 140485427459840)>']
[2025-06-28 06:14:38] 2025-06-28 10:14:20,800 | INFO     | all workflow threads have been joined
[2025-06-28 06:14:38] 2025-06-28 10:14:20,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-28 06:14:38] 2025-06-28 10:14:20,800 | INFO     | traces error code: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:20,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-28 06:14:38] 2025-06-28 10:14:38,077 | INFO     | PID=22989 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-28 06:14:38] 2025-06-28 10:14:38,077 | INFO     | found 0 job(s) in 20 queues
[2025-06-28 06:14:38] 2025-06-28 10:14:38,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-28 06:14:38] 2025-06-28 10:14:38,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-28 06:14:38] 2025-06-28 10:14:38,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-28 06:14:38] 2025-06-28 10:14:38,078 | INFO     | [monitor] control thread has ended
[2025-06-28 06:14:38] 2025-06-28 10:14:38,163 [wrapper] ==== pilot stdout END ====
[2025-06-28 06:14:38] 2025-06-28 10:14:38,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-28 06:14:38] 2025-06-28 10:14:38,170 [wrapper] pilotpid: 22989
[2025-06-28 06:14:38] 2025-06-28 10:14:38,174 [wrapper] Pilot exit status: 0
[2025-06-28 06:14:38] 2025-06-28 10:14:38,190 [wrapper] pandaids: 6711891482
[2025-06-28 06:14:38] 2025-06-28 10:14:38,227 [wrapper] cleanup supervisor_pilot 28152 22990
[2025-06-28 06:14:38] 2025-06-28 10:14:38,231 [wrapper] Test setup, not cleaning
[2025-06-28 06:14:38] 2025-06-28 10:14:38,235 [wrapper] apfmon messages muted
[2025-06-28 06:14:38] 2025-06-28 10:14:38,239 [wrapper] ==== wrapper stdout END ====
[2025-06-28 06:14:38] 2025-06-28 10:14:38,243 [wrapper] ==== wrapper stderr END ====
[2025-06-28 06:14:38]  *** Error codes and diagnostics ***
[2025-06-28 06:14:38]     "exeErrorCode": 0,
[2025-06-28 06:14:38]     "exeErrorDiag": "",
[2025-06-28 06:14:38]     "pilotErrorCode": 0,
[2025-06-28 06:14:38]     "pilotErrorDiag": "",
[2025-06-28 06:14:38]  *** Listing of results directory ***
[2025-06-28 06:14:38] total 516964
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas    530466 Jun 28 04:22 pilot3.tar.gz
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas      5112 Jun 28 04:41 queuedata.json
[2025-06-28 06:14:38] -rwx------ 1 boincer umatlas     36245 Jun 28 04:41 runpilot2-wrapper.sh
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas       100 Jun 28 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-28 06:14:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun 28 04:42 run_atlas
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas       105 Jun 28 04:42 job.xml
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas 289727102 Jun 28 04:42 EVNT.45388966._000004.pool.root.1
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas     15095 Jun 28 04:42 start_atlas.sh
[2025-06-28 06:14:38] drwxrwx--x 2 boincer umatlas      4096 Jun 28 04:42 shared
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas    542892 Jun 28 04:42 input.tar.gz
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas         0 Jun 28 04:42 boinc_lockfile
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas      2615 Jun 28 04:42 pandaJob.out
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas    970692 Jun 28 04:42 agis_schedconf.cvmfs.json
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas   1574086 Jun 28 04:42 agis_ddmendpoints.agis.ALL.json
[2025-06-28 06:14:38] drwx------ 4 boincer umatlas      4096 Jun 28 04:42 pilot3
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas      5867 Jun 28 06:09 init_data.xml
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas 234031413 Jun 28 06:13 HITS.45388968._000088.pool.root.1
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas        95 Jun 28 06:13 pilot_heartbeat.json
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas      1048 Jun 28 06:13 memory_monitor_summary.json
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas       529 Jun 28 06:13 boinc_task_state.xml
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas    370997 Jun 28 06:14 log.45388968._000088.job.log.tgz.1
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas      7840 Jun 28 06:14 heartbeat.json
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas        27 Jun 28 06:14 wrapper_checkpoint.txt
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas      8192 Jun 28 06:14 boinc_mmap_file
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas       745 Jun 28 06:14 pilotlog.txt
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas    515045 Jun 28 06:14 log.45388968._000088.job.log.1
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas       357 Jun 28 06:14 output.list
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas       620 Jun 28 06:14 runtime_log
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas    901120 Jun 28 06:14 result.tar.gz
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas      8662 Jun 28 06:14 runtime_log.err
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas       659 Jun 28 06:14 EyCODmiIgp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAo2KDmPtz8Tn.diag
[2025-06-28 06:14:38] -rw-r--r-- 1 boincer umatlas     22389 Jun 28 06:14 stderr.txt
[2025-06-28 06:14:38] HITS file was successfully produced:
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas 234031413 Jun 28 06:13 shared/HITS.pool.root.1
[2025-06-28 06:14:38]  *** Contents of shared directory: ***
[2025-06-28 06:14:38] total 512920
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas 289727102 Jun 28 04:42 ATLAS.root_0
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas     15095 Jun 28 04:42 start_atlas.sh
[2025-06-28 06:14:38] -rw-r--r-- 2 boincer umatlas    542892 Jun 28 04:42 input.tar.gz
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas 234031413 Jun 28 06:13 HITS.pool.root.1
[2025-06-28 06:14:38] -rw------- 1 boincer umatlas    901120 Jun 28 06:14 result.tar.gz
06:14:39 (18951): run_atlas exited; CPU time 60323.911311
06:14:39 (18951): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN