Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:58:08 (2849240): wrapper (7.7.26015): starting
02:58:08 (2849240): wrapper: running run_atlas (--nthreads 10)
[2025-06-28 02:58:08] Arguments: --nthreads 10
[2025-06-28 02:58:08] Threads: 10
[2025-06-28 02:58:08] Checking for CVMFS
[2025-06-28 02:58:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 02:58:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 02:58:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 02:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 02:58:09] 2.12.6.0 1583849 173752 331168 147672 1 85 32894336 32935936 2703 130560 2 470795357 99.695 498630945 22497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-28 02:58:09] CVMFS is ok
[2025-06-28 02:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-28 02:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-28 02:58:09] Further information can be found at the LHC@home message board.
[2025-06-28 02:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 02:58:09] Checking for apptainer binary...
[2025-06-28 02:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 02:58:09] Running /usr/bin/apptainer --version
[2025-06-28 02:58:09] apptainer version 1.4.1-1.el9
[2025-06-28 02:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 02:58:09] c-6-7.aglt2.org
[2025-06-28 02:58:09] apptainer works
[2025-06-28 02:58:09] Set ATHENA_PROC_NUMBER=10
[2025-06-28 02:58:09] Set ATHENA_CORE_NUMBER=10
[2025-06-28 02:58:09] Starting ATLAS job with PandaID=6710382228
[2025-06-28 02:58:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:04:46 (2873141): wrapper (7.7.26015): starting
03:04:46 (2873141): wrapper: running run_atlas (--nthreads 10)
[2025-06-28 03:04:47] Arguments: --nthreads 10
[2025-06-28 03:04:47] Threads: 10
[2025-06-28 03:04:47] This job has been restarted, cleaning up previous attempt
[2025-06-28 03:04:47] Checking for CVMFS
[2025-06-28 03:04:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 03:04:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 03:04:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 03:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 03:04:47] 2.12.6.0 1583849 173758 331084 147672 2 85 32898799 32935936 1830 130560 2 470841826 99.695 498630946 22497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-28 03:04:47] CVMFS is ok
[2025-06-28 03:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-28 03:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-28 03:04:47] Further information can be found at the LHC@home message board.
[2025-06-28 03:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 03:04:47] Checking for apptainer binary...
[2025-06-28 03:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 03:04:47] Running /usr/bin/apptainer --version
[2025-06-28 03:04:47] apptainer version 1.4.1-1.el9
[2025-06-28 03:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 03:04:47] c-6-7.aglt2.org
[2025-06-28 03:04:47] apptainer works
[2025-06-28 03:04:47] Set ATHENA_PROC_NUMBER=10
[2025-06-28 03:04:47] Set ATHENA_CORE_NUMBER=10
[2025-06-28 03:04:47] Starting ATLAS job with PandaID=6710382228
[2025-06-28 03:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-28 03:07:48]  *** The last 200 lines of the pilot log: ***
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | WARNING  | wrong length of table data, x=[1751094311.0], y=[0.0] (must be same and length>=4)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | could have reported an average CPU frequency of 3264 MHz (4 samples)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . Timing measurements:
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . get job = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . initial setup = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload setup = 2 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-in = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload execution = 3 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-out = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . log creation = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/pilotlog.txt
[2025-06-28 03:07:48] 2025-06-28 07:07:17,236 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-28 03:07:48] - Log from pilotlog.txt -
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | extracted standard info from prmon json
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | WARNING  | found no stored workdir sizes
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | INFO     | will not add max space = 0 B to job metrics
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | WARNING  | wrong length of table data, x=[1751094311.0], y=[0.0] (must be same and length>=4)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | could have reported an average CPU frequency of 3264 MHz (4 samples)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . Timing measurements:
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . get job = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . initial setup = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload setup = 2 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-in = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload execution = 3 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-out = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . log creation = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/pilotlog.txt
[2025-06-28 03:07:48] 2025-06-28 07:07:17,236 | WARNING  | 
[2025-06-28 03:07:48] [begin log extracts]
[2025-06-28 03:07:48] - Log from pilotlog.txt -
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | extracted standard info from prmon json
[2025-06-28 03:07:48] 2025-06-28 07:07:17,225 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | WARNING  | found no stored workdir sizes
[2025-06-28 03:07:48] 2025-06-28 07:07:17,226 | INFO     | will not add max space = 0 B to job metrics
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | WARNING  | wrong length of table data, x=[1751094311.0], y=[0.0] (must be same and length>=4)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | could have reported an average CPU frequency of 3264 MHz (4 samples)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . Timing measurements:
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . get job = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . initial setup = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload setup = 2 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-in = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . payload execution = 3 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . stage-out = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | . log creation = 0 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,227 | INFO     | ..............................
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-28 03:07:48] 2025-06-28 07:07:17,228 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/pilotlog.txt
[2025-06-28 03:07:48] [end log extracts]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,236 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,237 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,295 | INFO     | 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,295 | INFO     | job summary report
[2025-06-28 03:07:48] 2025-06-28 07:07:17,295 | INFO     | --------------------------------------------------
[2025-06-28 03:07:48] 2025-06-28 07:07:17,295 | INFO     | PanDA job id: 6710382228
[2025-06-28 03:07:48] 2025-06-28 07:07:17,295 | INFO     | task id: 45368797
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-06-28 03:07:48] 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | pilot error code: 1187
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | pilot error diag: metadata does not exist: /tmp/boinchome/slots/0/PanDA_Pilot-6710382228/metadata.xml
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | pilot state: failed 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | transexitcode: 127
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | exeerrorcode: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | exeerrordiag: 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | exitcode: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | exitmsg: 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | cpuconsumptiontime: 7 s
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | nevents: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | neventsw: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | pid: 2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | pgrp: 2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:17,296 | INFO     | corecount: 10
[2025-06-28 03:07:48] 2025-06-28 07:07:17,297 | INFO     | event service: False
[2025-06-28 03:07:48] 2025-06-28 07:07:17,297 | INFO     | sizes: {0: 2366989, 1: 2367188, 3: 2367450, 11: 2376304, 8: 2371799, 9: 2371827, 10: 2376276, 131: 2376272}
[2025-06-28 03:07:48] 2025-06-28 07:07:17,297 | INFO     | --------------------------------------------------
[2025-06-28 03:07:48] 2025-06-28 07:07:17,297 | INFO     | 
[2025-06-28 03:07:48] 2025-06-28 07:07:17,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | job 6710382228 has completed (purged errors)
[2025-06-28 03:07:48] 2025-06-28 07:07:17,309 | INFO     | overall cleanup function is called
[2025-06-28 03:07:48] 2025-06-28 07:07:18,315 | INFO     | --- collectZombieJob: --- 10, [2882588]
[2025-06-28 03:07:48] 2025-06-28 07:07:18,315 | INFO     | zombie collector waiting for pid 2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:18,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-28 03:07:48] 2025-06-28 07:07:18,315 | INFO     | collected zombie processes
[2025-06-28 03:07:48] 2025-06-28 07:07:18,315 | INFO     | will attempt to kill all subprocesses of pid=2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:18,468 | INFO     | process IDs to be killed: [2882588] (in reverse order)
[2025-06-28 03:07:48] 2025-06-28 07:07:18,511 | WARNING  | found no corresponding commands to process id(s)
[2025-06-28 03:07:48] 2025-06-28 07:07:18,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-28 03:07:48] 2025-06-28 07:07:18,516 | INFO     | did not find any defunct processes belonging to 2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:18,520 | INFO     | did not find any defunct processes belonging to 2882588
[2025-06-28 03:07:48] 2025-06-28 07:07:18,520 | INFO     | ready for new job
[2025-06-28 03:07:48] 2025-06-28 07:07:18,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-28 03:07:48] 2025-06-28 07:07:18,522 | INFO     | ***************************************
[2025-06-28 03:07:48] 2025-06-28 07:07:18,522 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-28 03:07:48] 2025-06-28 07:07:18,522 | INFO     | ***************************************
[2025-06-28 03:07:48] 2025-06-28 07:07:18,522 | INFO     | 
[2025-06-28 03:07:48] 2025-06-28 07:07:18,535 | INFO     | architecture information:
[2025-06-28 03:07:48] 2025-06-28 07:07:18,535 | INFO     | executing command: cat /etc/os-release
[2025-06-28 03:07:48] 2025-06-28 07:07:18,544 | INFO     | cat /etc/os-release:
[2025-06-28 03:07:48] NAME="CentOS Linux"
[2025-06-28 03:07:48] VERSION="7 (Core)"
[2025-06-28 03:07:48] ID="centos"
[2025-06-28 03:07:48] ID_LIKE="rhel fedora"
[2025-06-28 03:07:48] VERSION_ID="7"
[2025-06-28 03:07:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-28 03:07:48] ANSI_COLOR="0;31"
[2025-06-28 03:07:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-28 03:07:48] HOME_URL="https://www.centos.org/"
[2025-06-28 03:07:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-28 03:07:48] 
[2025-06-28 03:07:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-28 03:07:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-28 03:07:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-28 03:07:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-28 03:07:48] 
[2025-06-28 03:07:48] 2025-06-28 07:07:18,544 | INFO     | ***************************************
[2025-06-28 03:07:48] 2025-06-28 07:07:19,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-28 03:07:48] 2025-06-28 07:07:19,056 | INFO     | sufficient remaining disk space (76538707968 B)
[2025-06-28 03:07:48] 2025-06-28 07:07:19,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-28 03:07:48] 2025-06-28 07:07:19,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-28 03:07:48] 2025-06-28 07:07:19,057 | INFO     | update_server=False
[2025-06-28 03:07:48] 2025-06-28 07:07:19,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-28 03:07:48] 2025-06-28 07:07:19,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-28 03:07:48] 2025-06-28 07:07:19,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-28 03:07:48] 2025-06-28 07:07:19,462 | INFO     | all payload control threads have been joined
[2025-06-28 03:07:48] 2025-06-28 07:07:19,865 | INFO     | all data control threads have been joined
[2025-06-28 03:07:48] 2025-06-28 07:07:19,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-28 03:07:48] 2025-06-28 07:07:19,964 | INFO     | aborting loop
[2025-06-28 03:07:48] 2025-06-28 07:07:20,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-28 03:07:48] 2025-06-28 07:07:20,062 | INFO     | [job] queue monitor thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,062 | INFO     | [job] retrieve thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,381 | INFO     | [payload] validate_post thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,393 | INFO     | all job control threads have been joined
[2025-06-28 03:07:48] 2025-06-28 07:07:20,442 | INFO     | [payload] execute_payloads thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,463 | INFO     | [payload] control thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,539 | INFO     | [data] copytool_in thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,836 | INFO     | [job] validate thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,870 | INFO     | [data] control thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,919 | INFO     | [payload] failed_post thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,969 | INFO     | [job] job monitor thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:20,987 | INFO     | [job] create_data_payload thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:21,071 | INFO     | [payload] validate_pre thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:21,279 | INFO     | [data] copytool_out thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:21,396 | INFO     | [job] control thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:24,035 | INFO     | [data] queue_monitor thread has finished
[2025-06-28 03:07:48] 2025-06-28 07:07:24,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756430489408)>', '<ExcThread(monitor, started 139755819890432)>']
[2025-06-28 03:07:48] 2025-06-28 07:07:29,637 | INFO     | all workflow threads have been joined
[2025-06-28 03:07:48] 2025-06-28 07:07:29,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-28 03:07:48] 2025-06-28 07:07:29,638 | INFO     | traces error code: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:29,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-28 03:07:48] 2025-06-28 07:07:48,618 | INFO     | PID=2876809 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-28 03:07:48] 2025-06-28 07:07:48,618 | INFO     | .. there are 6 such processes running
[2025-06-28 03:07:48] 2025-06-28 07:07:48,618 | INFO     | found 0 job(s) in 20 queues
[2025-06-28 03:07:48] 2025-06-28 07:07:48,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-28 03:07:48] 2025-06-28 07:07:48,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-28 03:07:48] 2025-06-28 07:07:48,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-28 03:07:48] 2025-06-28 07:07:48,619 | INFO     | [monitor] control thread has ended
[2025-06-28 03:07:48] 2025-06-28 07:07:48,699 [wrapper] ==== pilot stdout END ====
[2025-06-28 03:07:48] 2025-06-28 07:07:48,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-28 03:07:48] 2025-06-28 07:07:48,703 [wrapper] pilotpid: 2876809
[2025-06-28 03:07:48] 2025-06-28 07:07:48,704 [wrapper] Pilot exit status: 0
[2025-06-28 03:07:48] 2025-06-28 07:07:48,710 [wrapper] pandaids: 6710382228 6710382228
[2025-06-28 03:07:48] 2025-06-28 07:07:48,738 [wrapper] cleanup supervisor_pilot 2876815 2876810
[2025-06-28 03:07:48] 2025-06-28 07:07:48,739 [wrapper] Test setup, not cleaning
[2025-06-28 03:07:48] 2025-06-28 07:07:48,741 [wrapper] apfmon messages muted
[2025-06-28 03:07:48] 2025-06-28 07:07:48,743 [wrapper] ==== wrapper stdout END ====
[2025-06-28 03:07:48] 2025-06-28 07:07:48,744 [wrapper] ==== wrapper stderr END ====
[2025-06-28 03:07:48]  *** Error codes and diagnostics ***
[2025-06-28 03:07:48]     "exeErrorCode": 0,
[2025-06-28 03:07:48]     "exeErrorDiag": "",
[2025-06-28 03:07:48]     "pilotErrorCode": 1305,
[2025-06-28 03:07:48]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-06-28 03:07:48]  *** Listing of results directory ***
[2025-06-28 03:07:48] total 650608
[2025-06-28 03:07:48] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas    530466 Jun 27 11:46 pilot3.tar.gz
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas      5112 Jun 27 11:47 queuedata.json
[2025-06-28 03:07:48] -rwx------. 1 boincer umatlas     36245 Jun 27 11:48 runpilot2-wrapper.sh
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas       100 Jun 28 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-28 03:07:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 28 02:58 run_atlas
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas       105 Jun 28 02:58 job.xml
[2025-06-28 03:07:48] -rw-r--r--. 3 boincer umatlas 331113626 Jun 28 02:58 EVNT.45368794._000014.pool.root.1
[2025-06-28 03:07:48] -rw-r--r--. 3 boincer umatlas 331113626 Jun 28 02:58 ATLAS.root_0
[2025-06-28 03:07:48] -rw-r--r--. 2 boincer umatlas     15095 Jun 28 02:58 start_atlas.sh
[2025-06-28 03:07:48] drwxrwx--x. 2 boincer umatlas      4096 Jun 28 02:58 shared
[2025-06-28 03:07:48] -rw-r--r--. 2 boincer umatlas    543076 Jun 28 02:58 input.tar.gz
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas         0 Jun 28 02:58 boinc_lockfile
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas   1574086 Jun 28 02:58 agis_ddmendpoints.agis.ALL.json
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas      2910 Jun 28 03:04 pandaJob.out
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas      6653 Jun 28 03:04 init_data.xml
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas    970692 Jun 28 03:04 agis_schedconf.cvmfs.json
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas       905 Jun 28 03:05 memory_monitor_summary.json
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas      8159 Jun 28 03:05 log.45368797._000615.job.log.tgz.1
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas        96 Jun 28 03:06 pilot_heartbeat.json
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas      2599 Jun 28 03:07 heartbeat.json
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas      8192 Jun 28 03:07 boinc_mmap_file
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas        22 Jun 28 03:07 wrapper_checkpoint.txt
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas       522 Jun 28 03:07 boinc_task_state.xml
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas       822 Jun 28 03:07 pilotlog.txt
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas     74837 Jun 28 03:07 log.45368797._000615.job.log.1
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas       186 Jun 28 03:07 output.list
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas       620 Jun 28 03:07 runtime_log
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas     92160 Jun 28 03:07 result.tar.gz
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas      8579 Jun 28 03:07 runtime_log.err
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas       757 Jun 28 03:07 EAoLDmnUQp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZi1KDm6S7GIo.diag
[2025-06-28 03:07:48] -rw-r--r--. 1 boincer umatlas     23621 Jun 28 03:07 stderr.txt
[2025-06-28 03:07:48] No HITS result produced
[2025-06-28 03:07:48]  *** Contents of shared directory: ***
[2025-06-28 03:07:48] total 323996
[2025-06-28 03:07:48] -rw-r--r--. 3 boincer umatlas 331113626 Jun 28 02:58 ATLAS.root_0
[2025-06-28 03:07:48] -rw-r--r--. 2 boincer umatlas     15095 Jun 28 02:58 start_atlas.sh
[2025-06-28 03:07:48] -rw-r--r--. 2 boincer umatlas    543076 Jun 28 02:58 input.tar.gz
[2025-06-28 03:07:48] -rw-------. 1 boincer umatlas     92160 Jun 28 03:07 result.tar.gz
03:07:50 (2873141): run_atlas exited; CPU time 13.143346
03:07:50 (2873141): called boinc_finish(0)

</stderr_txt>
]]>

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