Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:39:11 (15324): wrapper (7.7.26015): starting
06:39:11 (15324): wrapper: running run_atlas (--nthreads 8)
[2025-06-28 06:39:11] Arguments: --nthreads 8
[2025-06-28 06:39:11] Threads: 8
[2025-06-28 06:39:11] Checking for CVMFS
[2025-06-28 06:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-28 06:39:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-28 06:39:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-28 06:39:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-28 06:39:12] 2.11.2.0 3237 67287 125612 147668 1 14 14867661 25165824 364 130560 0 33654787 99.781 40283239 3289 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-28 06:39:12] CVMFS is ok
[2025-06-28 06:39:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-28 06:39:12] Checking for apptainer binary...
[2025-06-28 06:39:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-28 06:39:12] Running /usr/bin/apptainer --version
[2025-06-28 06:39:12] apptainer version 1.3.2-1.el7
[2025-06-28 06:39:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-28 06:39:13] cg-vwn417.simple-grid.lan
[2025-06-28 06:39:13] apptainer works
[2025-06-28 06:39:13] Set ATHENA_PROC_NUMBER=8
[2025-06-28 06:39:13] Set ATHENA_CORE_NUMBER=8
[2025-06-28 06:39:13] Starting ATLAS job with PandaID=6711437029
[2025-06-28 06:39:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-28 08:12:37]  *** The last 200 lines of the pilot log: ***
[2025-06-28 08:12:37]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6711437029/log.45389375._000112.job.log.tgz.1
[2025-06-28 08:12:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/7b/log.45389375._000112.job.log.tgz.1
[2025-06-28 08:12:37]  workdir=None
[2025-06-28 08:12:37] ]
[2025-06-28 08:12:37] 2025-06-28 06:11:59,153 | INFO     | transferring file log.45389375._000112.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/log.45389375._000112.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-28 08:12:37] 2025-06-28 06:11:59,153 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/log.45389375._000112.job.log.tgz.1 /var/lib/boinc/slots/6/log.45389375._000112.job
[2025-06-28 08:12:37] 2025-06-28 06:11:59,168 | INFO     | adding to output.list: log.45389375._000112.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/7b/log.45389375._000112.job.log.tg
[2025-06-28 08:12:37] 2025-06-28 06:11:59,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-28 08:12:37] 2025-06-28 06:11:59,168 | INFO     | summary of transferred files:
[2025-06-28 08:12:37] 2025-06-28 06:11:59,168 | INFO     |  -- lfn=log.45389375._000112.job.log.tgz.1, status_code=0, status=transferred
[2025-06-28 08:12:37] 2025-06-28 06:11:59,168 | INFO     | stage-out finished correctly
[2025-06-28 08:12:37] 2025-06-28 06:12:00,898 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-28 08:12:37] 2025-06-28 06:12:00,964 | INFO     | job 6711437029 has state=finished
[2025-06-28 08:12:37] 2025-06-28 06:12:00,964 | INFO     | preparing for final server update for job 6711437029 in state='finished'
[2025-06-28 08:12:37] 2025-06-28 06:12:00,964 | INFO     | this job has now completed (state=finished)
[2025-06-28 08:12:37] 2025-06-28 06:12:00,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-28 08:12:37] 2025-06-28 06:12:00,965 | INFO     | log transfer has been attempted: DONE
[2025-06-28 08:12:37] 2025-06-28 06:12:00,965 | INFO     | job 6711437029 has finished - writing final server update
[2025-06-28 08:12:37] 2025-06-28 06:12:00,965 | INFO     | total number of processed events: 400 (read)
[2025-06-28 08:12:37] 2025-06-28 06:12:00,965 | INFO     | executing command: lscpu
[2025-06-28 08:12:37] 2025-06-28 06:12:00,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-28 08:12:37] 2025-06-28 06:12:03,421 | WARNING  | process 25777 can no longer be monitored (due to stat problems) - aborting
[2025-06-28 08:12:37] 2025-06-28 06:12:03,422 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 08:12:37] 2025-06-28 06:12:03,423 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 08:12:37] 2025-06-28 06:12:03,423 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3256377 B
[2025-06-28 08:12:37] 2025-06-28 06:12:03,423 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16012 B
[2025-06-28 08:12:37] 2025-06-28 06:12:03,423 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-28 08:12:37] 2025-06-28 06:12:04,697 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-28 08:12:37] 2025-06-28 06:12:04,700 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-06-28 08:12:37] 2025-06-28 06:12:04,702 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/memory_monitor_summary.json (trf name=prmon)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,703 | INFO     | extracted standard info from prmon json
[2025-06-28 08:12:37] 2025-06-28 06:12:04,703 | INFO     | extracted standard memory fields from prmon json
[2025-06-28 08:12:37] 2025-06-28 06:12:04,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-28 08:12:37] 2025-06-28 06:12:04,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-28 08:12:37] 2025-06-28 06:12:04,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-28 08:12:37] 2025-06-28 06:12:04,705 | INFO     | fitting pss+swap vs Time
[2025-06-28 08:12:37] 2025-06-28 06:12:04,705 | INFO     | sum of square deviations: 183761585.0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | sum of deviations: -8799608131.0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | mean x: 1751088418.5
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | mean y: 2599392.523809524
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | -- intersect: 83855227707.26396
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | intersect: 83855227707.26396
[2025-06-28 08:12:37] 2025-06-28 06:12:04,706 | INFO     | chi2: 0.08162495044917696
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | -- intersect: 83855227707.26396
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | current memory leak: -47.89 B/s (using 84 data points, chi2=0.08)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | could have reported an average CPU frequency of 1999 MHz (6 samples)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | ..............................
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . Timing measurements:
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . get job = 0 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . initial setup = 1 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . payload setup = 4 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . stage-in = 0 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,707 | INFO     | . payload execution = 5535 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,708 | INFO     | . stage-out = 0 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,708 | INFO     | . log creation = 0 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,708 | INFO     | ..............................
[2025-06-28 08:12:37] 2025-06-28 06:12:04,722 | INFO     | sufficient remaining disk space (494754856960 B)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,722 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,779 | INFO     | 
[2025-06-28 08:12:37] 2025-06-28 06:12:04,779 | INFO     | job summary report
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | --------------------------------------------------
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | PanDA job id: 6711437029
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | task id: 45389375
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | errors: (none)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | pilot state: finished 
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | transexitcode: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | exeerrorcode: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | exeerrordiag: 
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | exitcode: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | exitmsg: OK
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | cpuconsumptiontime: 36713 s
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | nevents: 400
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | neventsw: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | pid: 25777
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | pgrp: 25777
[2025-06-28 08:12:37] 2025-06-28 06:12:04,780 | INFO     | corecount: 8
[2025-06-28 08:12:37] 2025-06-28 06:12:04,781 | INFO     | event service: False
[2025-06-28 08:12:37] 2025-06-28 06:12:04,781 | INFO     | sizes: {0: 2366702, 3: 2366964, 11: 2366992, 5544: 2393481, 5546: 2402479, 5547: 2402535, 5551: 2402857}
[2025-06-28 08:12:37] 2025-06-28 06:12:04,781 | INFO     | --------------------------------------------------
[2025-06-28 08:12:37] 2025-06-28 06:12:04,781 | INFO     | 
[2025-06-28 08:12:37] 2025-06-28 06:12:04,781 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-28 08:12:37] 2025-06-28 06:12:04,784 | INFO     | size of work directory /var/lib/boinc/slots/6/PanDA_Pilot-6711437029: 3560116 B (within 2537553920 B limit)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,784 | INFO     | pfn file=/var/lib/boinc/slots/6/PanDA_Pilot-6711437029/HITS.45389375._000112.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,785 | INFO     | total size of present files: 0 B (workdir size: 3560116 B)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,785 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/6/PanDA_Pilot-6711437029/HITS.45389375._000112.pool.root.1 since it does not exist
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | job 6711437029 has completed (purged errors)
[2025-06-28 08:12:37] 2025-06-28 06:12:04,798 | INFO     | overall cleanup function is called
[2025-06-28 08:12:37] 2025-06-28 06:12:04,826 | INFO     | number of running child processes to parent process 25777: 1
[2025-06-28 08:12:37] 2025-06-28 06:12:04,826 | INFO     | maximum number of monitored processes: 6
[2025-06-28 08:12:37] 2025-06-28 06:12:04,826 | INFO     | aborting job monitoring since job object (job id=6711437029) has expired
[2025-06-28 08:12:37] 2025-06-28 06:12:05,806 | INFO     | --- collectZombieJob: --- 10, [25777]
[2025-06-28 08:12:37] 2025-06-28 06:12:05,806 | INFO     | zombie collector waiting for pid 25777
[2025-06-28 08:12:37] 2025-06-28 06:12:05,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-28 08:12:37] 2025-06-28 06:12:05,806 | INFO     | collected zombie processes
[2025-06-28 08:12:37] 2025-06-28 06:12:05,806 | INFO     | will attempt to kill all subprocesses of pid=25777
[2025-06-28 08:12:37] 2025-06-28 06:12:05,842 | INFO     | process IDs to be killed: [25777] (in reverse order)
[2025-06-28 08:12:37] 2025-06-28 06:12:05,871 | WARNING  | found no corresponding commands to process id(s)
[2025-06-28 08:12:37] 2025-06-28 06:12:05,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-28 08:12:37] 2025-06-28 06:12:05,873 | INFO     | did not find any defunct processes belonging to 25777
[2025-06-28 08:12:37] 2025-06-28 06:12:05,874 | INFO     | did not find any defunct processes belonging to 25777
[2025-06-28 08:12:37] 2025-06-28 06:12:05,874 | INFO     | ready for new job
[2025-06-28 08:12:37] 2025-06-28 06:12:05,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | ***************************************
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | ***************************************
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | 
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | pilot is running in a VM
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | architecture information:
[2025-06-28 08:12:37] 2025-06-28 06:12:05,875 | INFO     | executing command: cat /etc/os-release
[2025-06-28 08:12:37] 2025-06-28 06:12:05,885 | INFO     | cat /etc/os-release:
[2025-06-28 08:12:37] NAME="CentOS Linux"
[2025-06-28 08:12:37] VERSION="7 (Core)"
[2025-06-28 08:12:37] ID="centos"
[2025-06-28 08:12:37] ID_LIKE="rhel fedora"
[2025-06-28 08:12:37] VERSION_ID="7"
[2025-06-28 08:12:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-28 08:12:37] ANSI_COLOR="0;31"
[2025-06-28 08:12:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-28 08:12:37] HOME_URL="https://www.centos.org/"
[2025-06-28 08:12:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-28 08:12:37] 
[2025-06-28 08:12:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-28 08:12:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-28 08:12:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-28 08:12:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-28 08:12:37] 
[2025-06-28 08:12:37] 2025-06-28 06:12:05,886 | INFO     | ***************************************
[2025-06-28 08:12:37] 2025-06-28 06:12:06,388 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-28 08:12:37] 2025-06-28 06:12:06,402 | INFO     | sufficient remaining disk space (494759051264 B)
[2025-06-28 08:12:37] 2025-06-28 06:12:06,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-28 08:12:37] 2025-06-28 06:12:06,402 | INFO     | current server update state: UPDATING_FINAL
[2025-06-28 08:12:37] 2025-06-28 06:12:06,402 | INFO     | update_server=False
[2025-06-28 08:12:37] 2025-06-28 06:12:06,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-28 08:12:37] 2025-06-28 06:12:06,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-28 08:12:37] 2025-06-28 06:12:06,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-28 08:12:37] 2025-06-28 06:12:06,403 | INFO     | aborting loop
[2025-06-28 08:12:37] 2025-06-28 06:12:06,594 | INFO     | all job control threads have been joined
[2025-06-28 08:12:37] 2025-06-28 06:12:06,712 | INFO     | all payload control threads have been joined
[2025-06-28 08:12:37] 2025-06-28 06:12:06,827 | INFO     | all data control threads have been joined
[2025-06-28 08:12:37] 2025-06-28 06:12:06,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-28 08:12:37] 2025-06-28 06:12:07,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-28 08:12:37] 2025-06-28 06:12:07,404 | INFO     | [job] queue monitor thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,408 | INFO     | [job] retrieve thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,408 | INFO     | [job] job monitor thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,502 | INFO     | [data] copytool_in thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,527 | INFO     | [payload] failed_post thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,599 | INFO     | [job] control thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,717 | INFO     | [payload] control thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:07,833 | INFO     | [data] control thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,196 | INFO     | [job] create_data_payload thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,270 | INFO     | [payload] validate_post thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,540 | INFO     | [payload] validate_pre thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,813 | INFO     | [job] validate thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:08,884 | INFO     | [payload] execute_payloads thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:09,262 | INFO     | [data] copytool_out thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:10,973 | INFO     | [data] queue_monitor thread has finished
[2025-06-28 08:12:37] 2025-06-28 06:12:11,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052649592640)>', '<ExcThread(monitor, started 140052214564608)>']
[2025-06-28 08:12:37] 2025-06-28 06:12:16,645 | INFO     | all workflow threads have been joined
[2025-06-28 08:12:37] 2025-06-28 06:12:16,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-28 08:12:37] 2025-06-28 06:12:16,645 | INFO     | traces error code: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:16,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-28 08:12:37] 2025-06-28 06:12:36,835 | INFO     | PID=19289 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-28 08:12:37] 2025-06-28 06:12:36,835 | INFO     | .. there are 2 such processes running
[2025-06-28 08:12:37] 2025-06-28 06:12:36,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-28 08:12:37] 2025-06-28 06:12:36,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-28 08:12:37] 2025-06-28 06:12:36,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-28 08:12:37] 2025-06-28 06:12:36,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-28 08:12:37] 2025-06-28 06:12:36,836 | INFO     | [monitor] control thread has ended
[2025-06-28 08:12:37] 2025-06-28 06:12:36,928 [wrapper] ==== pilot stdout END ====
[2025-06-28 08:12:37] 2025-06-28 06:12:36,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-28 08:12:37] 2025-06-28 06:12:36,933 [wrapper] pilotpid: 19289
[2025-06-28 08:12:37] 2025-06-28 06:12:36,936 [wrapper] Pilot exit status: 0
[2025-06-28 08:12:37] 2025-06-28 06:12:36,946 [wrapper] pandaids: 6711437029
[2025-06-28 08:12:37] 2025-06-28 06:12:36,966 [wrapper] cleanup supervisor_pilot  5414 19290
[2025-06-28 08:12:37] 2025-06-28 06:12:36,968 [wrapper] Test setup, not cleaning
[2025-06-28 08:12:37] 2025-06-28 06:12:36,972 [wrapper] apfmon messages muted
[2025-06-28 08:12:37] 2025-06-28 06:12:36,974 [wrapper] ==== wrapper stdout END ====
[2025-06-28 08:12:37] 2025-06-28 06:12:36,976 [wrapper] ==== wrapper stderr END ====
[2025-06-28 08:12:37]  *** Error codes and diagnostics ***
[2025-06-28 08:12:37]     "exeErrorCode": 0,
[2025-06-28 08:12:37]     "exeErrorDiag": "",
[2025-06-28 08:12:37]     "pilotErrorCode": 0,
[2025-06-28 08:12:37]     "pilotErrorDiag": "",
[2025-06-28 08:12:37]  *** Listing of results directory ***
[2025-06-28 08:12:37] total 518364
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc    530466 Jun 28 06:16 pilot3.tar.gz
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc      5112 Jun 28 06:34 queuedata.json
[2025-06-28 08:12:37] -rwx------. 1 boinc boinc     36245 Jun 28 06:35 runpilot2-wrapper.sh
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc       100 Jun 28 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-28 08:12:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun 28 06:39 run_atlas
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc       105 Jun 28 06:39 job.xml
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc     15095 Jun 28 06:39 start_atlas.sh
[2025-06-28 08:12:37] drwxrwx--x. 2 boinc boinc        68 Jun 28 06:39 shared
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc    542895 Jun 28 06:39 input.tar.gz
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc      6390 Jun 28 06:39 init_data.xml
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc 291969712 Jun 28 06:39 EVNT.45389373._000005.pool.root.1
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc         0 Jun 28 06:39 boinc_lockfile
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc      2644 Jun 28 06:39 pandaJob.out
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc    969209 Jun 28 06:39 agis_schedconf.cvmfs.json
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc   1574086 Jun 28 06:39 agis_ddmendpoints.agis.ALL.json
[2025-06-28 08:12:37] drwx------. 4 boinc boinc      4096 Jun 28 06:39 pilot3
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc 233342182 Jun 28 08:11 HITS.45389375._000112.pool.root.1
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc       530 Jun 28 08:11 boinc_task_state.xml
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc      1028 Jun 28 08:11 memory_monitor_summary.json
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc    308694 Jun 28 08:11 log.45389375._000112.job.log.tgz.1
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc      7763 Jun 28 08:12 heartbeat.json
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc      8192 Jun 28 08:12 boinc_mmap_file
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc        27 Jun 28 08:12 wrapper_checkpoint.txt
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc        95 Jun 28 08:12 pilot_heartbeat.json
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc       820 Jun 28 08:12 pilotlog.txt
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc    519021 Jun 28 08:12 log.45389375._000112.job.log.1
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc       357 Jun 28 08:12 output.list
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc       620 Jun 28 08:12 runtime_log
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc    849920 Jun 28 08:12 result.tar.gz
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc      8659 Jun 28 08:12 runtime_log.err
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc       651 Jun 28 08:12 awnNDmKTcp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDR2KDmPuNben.diag
[2025-06-28 08:12:37] -rw-r--r--. 1 boinc boinc     22198 Jun 28 08:12 stderr.txt
[2025-06-28 08:12:37] HITS file was successfully produced:
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc 233342182 Jun 28 08:11 shared/HITS.pool.root.1
[2025-06-28 08:12:37]  *** Contents of shared directory: ***
[2025-06-28 08:12:37] total 514384
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc     15095 Jun 28 06:39 start_atlas.sh
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc    542895 Jun 28 06:39 input.tar.gz
[2025-06-28 08:12:37] -rw-r--r--. 2 boinc boinc 291969712 Jun 28 06:39 ATLAS.root_0
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc 233342182 Jun 28 08:11 HITS.pool.root.1
[2025-06-28 08:12:37] -rw-------. 1 boinc boinc    849920 Jun 28 08:12 result.tar.gz
08:12:38 (15324): run_atlas exited; CPU time 36733.603150
08:12:38 (15324): called boinc_finish(0)

</stderr_txt>
]]>

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