Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
2025-06-27 15:38:21 (31436): Detected: vboxwrapper 26206
2025-06-27 15:38:21 (31436): Detected: BOINC client v8.0.2
2025-06-27 15:38:21 (31436): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-06-27 15:38:22 (31436): Successfully copied 'init_data.xml' to the shared directory.
2025-06-27 15:38:22 (31436): Create VM. (boinc_c35a0cd8da62acaa, slot#37)
2025-06-27 15:38:23 (31436): Setting Memory Size for VM. (4300MB)
2025-06-27 15:38:23 (31436): Setting CPU Count for VM. (3)
2025-06-27 15:38:23 (31436): Setting Chipset Options for VM.
2025-06-27 15:38:24 (31436): Setting Graphics Controller Options for VM.
2025-06-27 15:38:24 (31436): Setting Boot Options for VM.
2025-06-27 15:38:24 (31436): Setting Network Configuration for NAT.
2025-06-27 15:38:24 (31436): Enabling VM Network Access.
2025-06-27 15:38:25 (31436): Disabling USB Support for VM.
2025-06-27 15:38:25 (31436): Disabling COM Port Support for VM.
2025-06-27 15:38:25 (31436): Disabling LPT Port Support for VM.
2025-06-27 15:38:25 (31436): Disabling Audio Support for VM.
2025-06-27 15:38:26 (31436): Disabling Clipboard Support for VM.
2025-06-27 15:38:26 (31436): Disabling Drag and Drop Support for VM.
2025-06-27 15:38:26 (31436): Adding storage controller(s) to VM.
2025-06-27 15:38:26 (31436): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-27 15:38:27 (31436): Adding VirtualBox Guest Additions to VM.
2025-06-27 15:38:27 (31436): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-27 15:38:27 (31436): forwarding host port 53619 to guest port 80
2025-06-27 15:38:28 (31436): Enabling remote desktop for VM.
2025-06-27 15:38:28 (31436): Required extension pack not installed, remote desktop not enabled.
2025-06-27 15:38:28 (31436): Enabling shared directory for VM.
2025-06-27 15:38:28 (31436): Starting VM using VBoxManage interface. (boinc_c35a0cd8da62acaa, slot#37)
2025-06-27 15:38:33 (31436): Successfully started VM. (PID = '28876')
2025-06-27 15:38:33 (31436): Reporting VM Process ID to BOINC.
2025-06-27 15:38:33 (31436): Guest Log: BIOS: VirtualBox 7.1.10
2025-06-27 15:38:33 (31436): Guest Log: CPUID EDX: 0x178bfbff
2025-06-27 15:38:33 (31436): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-27 15:38:33 (31436): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-27 15:38:33 (31436): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-27 15:38:33 (31436): Detected: Web Application Enabled (http://localhost:53619)
2025-06-27 15:38:33 (31436): Preference change detected
2025-06-27 15:38:33 (31436): Setting CPU throttle for VM. (100%)
2025-06-27 15:38:34 (31436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-27 15:38:35 (31436): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-27 15:38:35 (31436): Guest Log: BIOS: Booting from Hard Disk...
2025-06-27 15:38:37 (31436): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-27 15:38:37 (31436): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-27 15:38:37 (31436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-27 15:38:42 (31436): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-27 15:38:42 (31436): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-27 15:38:45 (31436): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000070 main     Log opened 2025-06-27T15:38:43.884406000Z
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000148 main     OS Product: Linux
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000165 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000180 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000194 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000195 main     Process ID: 1285
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000195 main     Package type: LINUX_64BITS_GENERIC
2025-06-27 15:38:45 (31436): Guest Log: 00:00:00.000656 main     5.2.32 r132073 started. Verbose level = 0
2025-06-27 15:38:55 (31436): Guest Log: 00:00:10.006022 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 208 686 000ns (GuestNow=1 751 031 535 677 314 000 ns GuestLast=1 751 038 723 886 000 000 ns fSetTimeLastLoop=true )
2025-06-27 15:39:06 (31436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-27 15:39:06 (31436): Guest Log: [INFO] Mounting shared directory
2025-06-27 15:39:06 (31436): Guest Log: [INFO] Checking for init_data.xml
2025-06-27 15:39:08 (31436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-27 15:39:08 (31436): Guest Log: [INFO] Detected branch: prod
2025-06-27 15:39:08 (31436): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-27 15:39:08 (31436): Guest Log: Copying input files
2025-06-27 15:39:09 (31436): Guest Log: Copied input files into RunAtlas.
2025-06-27 15:39:09 (31436): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-27 15:39:09 (31436): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-27 15:39:09 (31436): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-27 15:39:09 (31436): Guest Log: Further information can be found at the LHC@home message board.
2025-06-27 15:39:16 (31436): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-27 15:39:16 (31436): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-27 15:39:16 (31436): Guest Log: 2.6.3.0 1583 0 32196 147642 4 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-27 15:39:17 (31436): Guest Log: copied the webapp to /var/www
2025-06-27 15:39:17 (31436): Guest Log: ATHENA_PROC_NUMBER=3
2025-06-27 15:39:17 (31436): Guest Log: ATHENA_CORE_NUMBER=3
2025-06-27 15:39:17 (31436): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-27 15:39:17 (31436): Guest Log:  *** Starting ATLAS job. (PandaID=6710095012 taskID=45368829) ***
2025-06-27 15:43:16 (31436): Guest Log:  *** Job finished ***
2025-06-27 15:43:16 (31436): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:42:53,910 | INFO     | all workflow threads have been joined
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:42:53,910 | INFO     | end of generic workflow (traces error code: 0)
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:42:53,911 | INFO     | traces error code: 0
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:42:53,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,190 | INFO     | PID=5873 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,190 | INFO     | found 0 job(s) in 20 queues
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,191 | INFO     | [monitor] control thread has ended
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,287 [wrapper] ==== pilot stdout END ====
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,290 [wrapper] ==== wrapper stdout RESUME ====
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,293 [wrapper] pilotpid: 5873
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,295 [wrapper] Pilot exit status: 0
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,461 [wrapper] pandaids: 6710095012
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,485 [wrapper] cleanup supervisor_pilot  5879 5874
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,488 [wrapper] Test setup, not cleaning
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,491 [wrapper] apfmon messages muted
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,495 [wrapper] ==== wrapper stdout END ====
2025-06-27 15:43:16 (31436): Guest Log: 2025-06-27 13:43:15,498 [wrapper] ==== wrapper stderr END ====
2025-06-27 15:43:16 (31436): Guest Log:  *** Error codes and diagnostics ***
2025-06-27 15:43:16 (31436): Guest Log:     "exeErrorCode": 0,
2025-06-27 15:43:16 (31436): Guest Log:     "exeErrorDiag": "",
2025-06-27 15:43:16 (31436): Guest Log:     "pilotErrorCode": 1305,
2025-06-27 15:43:16 (31436): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-06-27 15:43:16 (31436): Guest Log:  *** Listing of results directory ***
2025-06-27 15:43:16 (31436): Guest Log: total 3836
2025-06-27 15:43:16 (31436): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jun 27 10:21 pilot3.tar.gz
2025-06-27 15:43:16 (31436): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jun 27 10:27 queuedata.json
2025-06-27 15:43:16 (31436): Guest Log: -rwx------. 1 atlas atlas   36245 Jun 27 10:27 runpilot2-wrapper.sh
2025-06-27 15:43:16 (31436): Guest Log: -rwxr-xr-x. 1 atlas atlas    9072 Jun 27 13:39 init_data.xml
2025-06-27 15:43:16 (31436): Guest Log: -rwxr-xr-x. 1 atlas atlas  543072 Jun 27 13:39 input.tar.gz
2025-06-27 15:43:16 (31436): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jun 27 13:39 start_atlas.sh
2025-06-27 15:43:16 (31436): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 27 13:39 EVNT.45368826._000010.pool.root.1 -> /data/./ATLAS.root_0
2025-06-27 15:43:16 (31436): Guest Log: -rw-r--r--. 1 atlas atlas    2908 Jun 27 13:39 pandaJob.out
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas  966677 Jun 27 13:39 agis_schedconf.cvmfs.json
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas 1574086 Jun 27 13:39 agis_ddmendpoints.agis.ALL.json
2025-06-27 15:43:16 (31436): Guest Log: drwx------. 4 atlas atlas    4096 Jun 27 13:39 pilot3
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas     881 Jun 27 13:40 memory_monitor_summary.json
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas    7978 Jun 27 13:40 log.45368829._000679.job.log.tgz.1
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas    2559 Jun 27 13:42 heartbeat.json
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas      95 Jun 27 13:43 pilot_heartbeat.json
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas     744 Jun 27 13:43 pilotlog.txt
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas   74293 Jun 27 13:43 log.45368829._000679.job.log.1
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas     186 Jun 27 13:43 output.list
2025-06-27 15:43:16 (31436): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jun 27 13:43 runtime_log
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas   92160 Jun 27 13:43 result.tar.gz
2025-06-27 15:43:16 (31436): Guest Log: -rw-r--r--. 1 atlas atlas    8403 Jun 27 13:43 runtime_log.err
2025-06-27 15:43:16 (31436): Guest Log: -rw-------. 1 atlas atlas     628 Jun 27 13:43 AnaLDm9TLp7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBO1KDmhIPqWm.diag
2025-06-27 15:43:16 (31436): Guest Log: Looking for outputfile HITS.45368829._000679.pool.root.1
2025-06-27 15:43:16 (31436): Guest Log: No HITS file was produced
2025-06-27 15:43:16 (31436): Guest Log: Successfully finished the ATLAS job!
2025-06-27 15:43:16 (31436): Guest Log: Copying the results back to the shared directory!
2025-06-27 15:43:16 (31436): Guest Log:  *** Contents of shared directory: ***
2025-06-27 15:43:16 (31436): Guest Log: total 326604
2025-06-27 15:43:16 (31436): Guest Log: -rwxrwxrwx. 1 root root 333772154 Jun 27 13:38 ATLAS.root_0
2025-06-27 15:43:16 (31436): Guest Log: -rwxrwxrwx. 1 root root      9072 Jun 27 13:38 init_data.xml
2025-06-27 15:43:17 (31436): Guest Log: -rwxrwxrwx. 1 root root    543072 Jun 27 13:37 input.tar.gz
2025-06-27 15:43:17 (31436): Guest Log: -rwxrwxrwx. 1 root root     92160 Jun 27 13:43 result.tar.gz
2025-06-27 15:43:17 (31436): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 27 13:37 start_atlas.sh
2025-06-27 15:43:17 (31436): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-27 15:43:17 (31436): VM Completion File Detected.
2025-06-27 15:43:17 (31436): Powering off VM.
2025-06-27 15:43:17 (31436): Successfully stopped VM.
2025-06-27 15:43:17 (31436): Deregistering VM. (boinc_c35a0cd8da62acaa, slot#37)
2025-06-27 15:43:17 (31436): Removing network bandwidth throttle group from VM.
2025-06-27 15:43:17 (31436): Removing VM from VirtualBox.
15:43:23 (31436): called boinc_finish(0)

</stderr_txt>
]]>

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