Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:55:04 (14976): wrapper (7.7.26015): starting
16:55:04 (14976): wrapper: running run_atlas (--nthreads 12)
[2025-06-26 16:55:04] Arguments: --nthreads 12
[2025-06-26 16:55:04] Threads: 12
[2025-06-26 16:55:04] Checking for CVMFS
[2025-06-26 16:55:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-26 16:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-26 16:55:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-26 16:55:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-26 16:55:04] 2.11.2.0 2924 67822 96004 147615 1 68 11862482 20275200 1 130560 0 23315883 99.962 8802384 10045 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-26 16:55:04] CVMFS is ok
[2025-06-26 16:55:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-26 16:55:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-26 16:55:04] Further information can be found at the LHC@home message board.
[2025-06-26 16:55:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-26 16:55:04] Checking for apptainer binary...
[2025-06-26 16:55:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-26 16:55:04] Running /usr/bin/apptainer --version
[2025-06-26 16:55:04] apptainer version 1.3.2-1.el7
[2025-06-26 16:55:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-26 16:55:05] c-205-28.aglt2.org
[2025-06-26 16:55:05] apptainer works
[2025-06-26 16:55:06] Set ATHENA_PROC_NUMBER=12
[2025-06-26 16:55:06] Set ATHENA_CORE_NUMBER=12
[2025-06-26 16:55:06] Starting ATLAS job with PandaID=6699405675
[2025-06-26 16:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-26 18:35:39]  *** The last 200 lines of the pilot log: ***
[2025-06-26 18:35:39]  lfn=log.45275585._001293.job.log.tgz.1
[2025-06-26 18:35:39]  mtime=0
[2025-06-26 18:35:39]  protocol_id=None
[2025-06-26 18:35:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-26 18:35:39]  replicas=None
[2025-06-26 18:35:39]  scope=mc23_13p6TeV
[2025-06-26 18:35:39]  status=None
[2025-06-26 18:35:39]  status_code=0
[2025-06-26 18:35:39]  storage_token=
[2025-06-26 18:35:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6699405675/log.45275585._001293.job.log.tgz.1
[2025-06-26 18:35:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/53/log.45275585._001293.job.log.tgz.1
[2025-06-26 18:35:39]  workdir=None
[2025-06-26 18:35:39] ]
[2025-06-26 18:35:39] 2025-06-26 22:34:59,285 | INFO     | transferring file log.45275585._001293.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6699405675/log.45275585._001293.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-26 18:35:39] 2025-06-26 22:34:59,287 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6699405675/log.45275585._001293.job.log.tgz.1 /tmp/boinchome/slots/0/log.45275585._001293.job
[2025-06-26 18:35:39] 2025-06-26 22:34:59,311 | INFO     | adding to output.list: log.45275585._001293.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/53/log.45275585._001293.job.log.tg
[2025-06-26 18:35:39] 2025-06-26 22:34:59,313 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-26 18:35:39] 2025-06-26 22:34:59,313 | INFO     | summary of transferred files:
[2025-06-26 18:35:39] 2025-06-26 22:34:59,313 | INFO     |  -- lfn=log.45275585._001293.job.log.tgz.1, status_code=0, status=transferred
[2025-06-26 18:35:39] 2025-06-26 22:34:59,314 | INFO     | stage-out finished correctly
[2025-06-26 18:35:39] 2025-06-26 22:34:59,804 | INFO     | monitor loop #445: job 0:6699405675 is in state 'finished'
[2025-06-26 18:35:39] 2025-06-26 22:34:59,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:35:39] 2025-06-26 22:35:01,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-26 18:35:39] 2025-06-26 22:35:01,750 | INFO     | job 6699405675 has state=finished
[2025-06-26 18:35:39] 2025-06-26 22:35:01,750 | INFO     | preparing for final server update for job 6699405675 in state='finished'
[2025-06-26 18:35:39] 2025-06-26 22:35:01,751 | INFO     | this job has now completed (state=finished)
[2025-06-26 18:35:39] 2025-06-26 22:35:01,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-26 18:35:39] 2025-06-26 22:35:01,752 | INFO     | log transfer has been attempted: DONE
[2025-06-26 18:35:39] 2025-06-26 22:35:01,752 | INFO     | job 6699405675 has finished - writing final server update
[2025-06-26 18:35:39] 2025-06-26 22:35:01,752 | INFO     | total number of processed events: 400 (read)
[2025-06-26 18:35:39] 2025-06-26 22:35:01,753 | INFO     | executing command: lscpu
[2025-06-26 18:35:39] 2025-06-26 22:35:01,777 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-26 18:35:39] 2025-06-26 22:35:02,307 | INFO     | monitor loop #446: job 0:6699405675 is in state 'finished'
[2025-06-26 18:35:39] 2025-06-26 22:35:02,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:35:39] 2025-06-26 22:35:04,810 | INFO     | monitor loop #447: job 0:6699405675 is in state 'finished'
[2025-06-26 18:35:39] 2025-06-26 22:35:04,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,454 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-26 18:35:39] 2025-06-26 22:35:06,458 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-06-26 18:35:39] 2025-06-26 22:35:06,461 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6699405675/memory_monitor_summary.json (trf name=prmon)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,461 | INFO     | extracted standard info from prmon json
[2025-06-26 18:35:39] 2025-06-26 22:35:06,462 | INFO     | extracted standard memory fields from prmon json
[2025-06-26 18:35:39] 2025-06-26 22:35:06,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-26 18:35:39] 2025-06-26 22:35:06,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-26 18:35:39] 2025-06-26 22:35:06,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-26 18:35:39] 2025-06-26 22:35:06,464 | INFO     | fitting pss+swap vs Time
[2025-06-26 18:35:39] 2025-06-26 22:35:06,465 | INFO     | sum of square deviations: 233641590.0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,465 | INFO     | sum of deviations: -3649438216.0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,465 | INFO     | mean x: 1750974400.0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,465 | INFO     | mean y: 2759362.714285714
[2025-06-26 18:35:39] 2025-06-26 22:35:06,466 | INFO     | -- intersect: 27352654090.779057
[2025-06-26 18:35:39] 2025-06-26 22:35:06,466 | INFO     | intersect: 27352654090.779057
[2025-06-26 18:35:39] 2025-06-26 22:35:06,466 | INFO     | chi2: 0.12366175081883697
[2025-06-26 18:35:39] 2025-06-26 22:35:06,466 | INFO     | -- intersect: 27352654090.779057
[2025-06-26 18:35:39] 2025-06-26 22:35:06,466 | INFO     | current memory leak: -15.62 B/s (using 91 data points, chi2=0.12)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | could have reported an average CPU frequency of 2133 MHz (7 samples)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | ..............................
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . Timing measurements:
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . get job = 0 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . initial setup = 2 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . payload setup = 10 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . stage-in = 0 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . payload execution = 5949 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,467 | INFO     | . stage-out = 0 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,468 | INFO     | . log creation = 0 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,468 | INFO     | ..............................
[2025-06-26 18:35:39] 2025-06-26 22:35:06,552 | INFO     | 
[2025-06-26 18:35:39] 2025-06-26 22:35:06,552 | INFO     | job summary report
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | --------------------------------------------------
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | PanDA job id: 6699405675
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | task id: 45275585
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | errors: (none)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-26 18:35:39] 2025-06-26 22:35:06,553 | INFO     | pilot state: finished 
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | transexitcode: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | exeerrorcode: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | exeerrordiag: 
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | exitcode: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | exitmsg: OK
[2025-06-26 18:35:39] 2025-06-26 22:35:06,554 | INFO     | cpuconsumptiontime: 63396 s
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | nevents: 400
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | neventsw: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | pid: 24981
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | pgrp: 24981
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | corecount: 12
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | event service: False
[2025-06-26 18:35:39] 2025-06-26 22:35:06,555 | INFO     | sizes: {0: 2366339, 1: 2366594, 6: 2366856, 12: 2366884, 5963: 2393611, 5965: 2402609, 5967: 2402793, 5972: 2402987}
[2025-06-26 18:35:39] 2025-06-26 22:35:06,556 | INFO     | --------------------------------------------------
[2025-06-26 18:35:39] 2025-06-26 22:35:06,556 | INFO     | 
[2025-06-26 18:35:39] 2025-06-26 22:35:06,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-26 18:35:39] 2025-06-26 22:35:06,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-26 18:35:39] 2025-06-26 22:35:06,584 | INFO     | job 6699405675 has completed (purged errors)
[2025-06-26 18:35:39] 2025-06-26 22:35:06,585 | INFO     | overall cleanup function is called
[2025-06-26 18:35:39] 2025-06-26 22:35:07,593 | INFO     | --- collectZombieJob: --- 10, [24981]
[2025-06-26 18:35:39] 2025-06-26 22:35:07,593 | INFO     | zombie collector waiting for pid 24981
[2025-06-26 18:35:39] 2025-06-26 22:35:07,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-26 18:35:39] 2025-06-26 22:35:07,593 | INFO     | collected zombie processes
[2025-06-26 18:35:39] 2025-06-26 22:35:07,593 | INFO     | will attempt to kill all subprocesses of pid=24981
[2025-06-26 18:35:39] 2025-06-26 22:35:07,684 | INFO     | process IDs to be killed: [24981] (in reverse order)
[2025-06-26 18:35:39] 2025-06-26 22:35:07,737 | WARNING  | found no corresponding commands to process id(s)
[2025-06-26 18:35:39] 2025-06-26 22:35:07,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-26 18:35:39] 2025-06-26 22:35:07,741 | INFO     | did not find any defunct processes belonging to 24981
[2025-06-26 18:35:39] 2025-06-26 22:35:07,744 | INFO     | did not find any defunct processes belonging to 24981
[2025-06-26 18:35:39] 2025-06-26 22:35:07,744 | INFO     | ready for new job
[2025-06-26 18:35:39] 2025-06-26 22:35:07,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-26 18:35:39] 2025-06-26 22:35:07,746 | INFO     | ***************************************
[2025-06-26 18:35:39] 2025-06-26 22:35:07,746 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-26 18:35:39] 2025-06-26 22:35:07,746 | INFO     | ***************************************
[2025-06-26 18:35:39] 2025-06-26 22:35:07,746 | INFO     | 
[2025-06-26 18:35:39] 2025-06-26 22:35:07,747 | INFO     | architecture information:
[2025-06-26 18:35:39] 2025-06-26 22:35:07,747 | INFO     | executing command: cat /etc/os-release
[2025-06-26 18:35:39] 2025-06-26 22:35:07,761 | INFO     | cat /etc/os-release:
[2025-06-26 18:35:39] NAME="CentOS Linux"
[2025-06-26 18:35:39] VERSION="7 (Core)"
[2025-06-26 18:35:39] ID="centos"
[2025-06-26 18:35:39] ID_LIKE="rhel fedora"
[2025-06-26 18:35:39] VERSION_ID="7"
[2025-06-26 18:35:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-26 18:35:39] ANSI_COLOR="0;31"
[2025-06-26 18:35:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-26 18:35:39] HOME_URL="https://www.centos.org/"
[2025-06-26 18:35:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-26 18:35:39] 
[2025-06-26 18:35:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-26 18:35:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-26 18:35:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-26 18:35:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-26 18:35:39] 
[2025-06-26 18:35:39] 2025-06-26 22:35:07,762 | INFO     | ***************************************
[2025-06-26 18:35:39] 2025-06-26 22:35:08,265 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-26 18:35:39] 2025-06-26 22:35:08,282 | INFO     | sufficient remaining disk space (29192355840 B)
[2025-06-26 18:35:39] 2025-06-26 22:35:08,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-26 18:35:39] 2025-06-26 22:35:08,283 | INFO     | current server update state: UPDATING_FINAL
[2025-06-26 18:35:39] 2025-06-26 22:35:08,283 | INFO     | update_server=False
[2025-06-26 18:35:39] 2025-06-26 22:35:08,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-26 18:35:39] 2025-06-26 22:35:08,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-26 18:35:39] 2025-06-26 22:35:08,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-26 18:35:39] 2025-06-26 22:35:08,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-26 18:35:39] 2025-06-26 22:35:08,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-26 18:35:39] 2025-06-26 22:35:08,318 | INFO     | aborting loop
[2025-06-26 18:35:39] 2025-06-26 22:35:08,460 | INFO     | all data control threads have been joined
[2025-06-26 18:35:39] 2025-06-26 22:35:09,286 | INFO     | [job] queue monitor thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:09,288 | INFO     | [job] retrieve thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:09,324 | INFO     | [job] job monitor thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:09,333 | INFO     | all job control threads have been joined
[2025-06-26 18:35:39] 2025-06-26 22:35:09,462 | INFO     | [data] control thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:09,550 | INFO     | all payload control threads have been joined
[2025-06-26 18:35:39] 2025-06-26 22:35:09,723 | INFO     | [payload] failed_post thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:09,776 | INFO     | [data] copytool_in thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,219 | INFO     | [payload] validate_post thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,290 | INFO     | [data] copytool_out thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,335 | INFO     | [job] control thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,555 | INFO     | [payload] control thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,739 | INFO     | [payload] execute_payloads thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,756 | INFO     | [job] create_data_payload thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,784 | INFO     | [job] validate thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:10,788 | INFO     | [payload] validate_pre thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:12,289 | INFO     | [data] queue_monitor thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:18,390 | INFO     | job.realtimelogging is not enabled
[2025-06-26 18:35:39] 2025-06-26 22:35:19,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-26 18:35:39] 2025-06-26 22:35:19,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028971214656)>', '<ExcThread(monitor, started 140027946333952)>']
[2025-06-26 18:35:39] 2025-06-26 22:35:24,873 | INFO     | all workflow threads have been joined
[2025-06-26 18:35:39] 2025-06-26 22:35:24,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-26 18:35:39] 2025-06-26 22:35:24,873 | INFO     | traces error code: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:24,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-26 18:35:39] 2025-06-26 22:35:38,998 | INFO     | PID=18568 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | INFO     | found 0 job(s) in 20 queues
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | CRITICAL | thread 'MainThread' is not alive
[2025-06-26 18:35:39] 2025-06-26 22:35:38,999 | INFO     | [monitor] control thread has ended
[2025-06-26 18:35:39] 2025-06-26 22:35:39,099 [wrapper] ==== pilot stdout END ====
[2025-06-26 18:35:39] 2025-06-26 22:35:39,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-26 18:35:39] 2025-06-26 22:35:39,106 [wrapper] pilotpid: 18568
[2025-06-26 18:35:39] 2025-06-26 22:35:39,110 [wrapper] Pilot exit status: 0
[2025-06-26 18:35:39] 2025-06-26 22:35:39,125 [wrapper] pandaids: 6699405675
[2025-06-26 18:35:39] 2025-06-26 22:35:39,162 [wrapper] cleanup supervisor_pilot 20186 18569
[2025-06-26 18:35:39] 2025-06-26 22:35:39,166 [wrapper] Test setup, not cleaning
[2025-06-26 18:35:39] 2025-06-26 22:35:39,170 [wrapper] apfmon messages muted
[2025-06-26 18:35:39] 2025-06-26 22:35:39,174 [wrapper] ==== wrapper stdout END ====
[2025-06-26 18:35:39] 2025-06-26 22:35:39,177 [wrapper] ==== wrapper stderr END ====
[2025-06-26 18:35:39]  *** Error codes and diagnostics ***
[2025-06-26 18:35:39]     "exeErrorCode": 0,
[2025-06-26 18:35:39]     "exeErrorDiag": "",
[2025-06-26 18:35:39]     "pilotErrorCode": 0,
[2025-06-26 18:35:39]     "pilotErrorDiag": "",
[2025-06-26 18:35:39]  *** Listing of results directory ***
[2025-06-26 18:35:39] total 531124
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas    530466 Jun 18 15:50 pilot3.tar.gz
[2025-06-26 18:35:39] -rwx------ 1 boincer umatlas     36245 Jun 18 15:53 runpilot2-wrapper.sh
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas      5112 Jun 18 15:53 queuedata.json
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas       100 Jun 26 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-26 18:35:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 16:55 run_atlas
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas       105 Jun 26 16:55 job.xml
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas 292814229 Jun 26 16:55 EVNT.45275579._000054.pool.root.1
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas     15095 Jun 26 16:55 start_atlas.sh
[2025-06-26 18:35:39] drwxrwx--x 2 boincer umatlas      4096 Jun 26 16:55 shared
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas    542880 Jun 26 16:55 input.tar.gz
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas         0 Jun 26 16:55 boinc_lockfile
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas      2541 Jun 26 16:55 pandaJob.out
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas    966786 Jun 26 16:55 agis_schedconf.cvmfs.json
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas   1574086 Jun 26 16:55 agis_ddmendpoints.agis.ALL.json
[2025-06-26 18:35:39] drwx------ 4 boincer umatlas      4096 Jun 26 16:55 pilot3
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas      5867 Jun 26 18:28 init_data.xml
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas 245326216 Jun 26 18:34 HITS.45275585._001293.pool.root.1
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas       529 Jun 26 18:34 boinc_task_state.xml
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas      1053 Jun 26 18:34 memory_monitor_summary.json
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas    381831 Jun 26 18:34 log.45275585._001293.job.log.tgz.1
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas      7849 Jun 26 18:35 heartbeat.json
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas        27 Jun 26 18:35 wrapper_checkpoint.txt
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 18:35 boinc_mmap_file
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas       815 Jun 26 18:35 pilotlog.txt
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas        95 Jun 26 18:35 pilot_heartbeat.json
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas    559174 Jun 26 18:35 log.45275585._001293.job.log.1
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas       357 Jun 26 18:35 output.list
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas       620 Jun 26 18:35 runtime_log
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas    962560 Jun 26 18:35 result.tar.gz
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas      8662 Jun 26 18:35 runtime_log.err
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas       660 Jun 26 18:35 MfaKDmr1Dm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiqbKDmVdW9In.diag
[2025-06-26 18:35:39] -rw-r--r-- 1 boincer umatlas     21629 Jun 26 18:35 stderr.txt
[2025-06-26 18:35:39] HITS file was successfully produced:
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas 245326216 Jun 26 18:34 shared/HITS.pool.root.1
[2025-06-26 18:35:39]  *** Contents of shared directory: ***
[2025-06-26 18:35:39] total 527024
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas 292814229 Jun 26 16:55 ATLAS.root_0
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas     15095 Jun 26 16:55 start_atlas.sh
[2025-06-26 18:35:39] -rw-r--r-- 2 boincer umatlas    542880 Jun 26 16:55 input.tar.gz
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas 245326216 Jun 26 18:34 HITS.pool.root.1
[2025-06-26 18:35:39] -rw------- 1 boincer umatlas    962560 Jun 26 18:35 result.tar.gz
18:35:41 (14976): run_atlas exited; CPU time 63364.962880
18:35:41 (14976): called boinc_finish(0)

</stderr_txt>
]]>

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