Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:22:29 (211545): wrapper (7.7.26015): starting
05:22:29 (211545): wrapper: running run_atlas (--nthreads 8)
[2025-06-26 05:22:29] Arguments: --nthreads 8
[2025-06-26 05:22:29] Threads: 8
[2025-06-26 05:22:29] Checking for CVMFS
[2025-06-26 05:22:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-26 05:22:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-26 05:22:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-26 05:22:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-26 05:22:29] 2.11.2.0 7041 60277 247060 147596 3 80 16603543 18432000 16665 130560 0 198384322 99.522 217143102 41986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-26 05:22:29] CVMFS is ok
[2025-06-26 05:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-26 05:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-26 05:22:29] Further information can be found at the LHC@home message board.
[2025-06-26 05:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-26 05:22:29] Checking for apptainer binary...
[2025-06-26 05:22:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-26 05:22:29] Running /usr/bin/apptainer --version
[2025-06-26 05:22:29] apptainer version 1.3.2-1.el7
[2025-06-26 05:22:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-26 05:22:31] c-211-33-2.aglt2.org
[2025-06-26 05:22:31] apptainer works
[2025-06-26 05:22:31] Set ATHENA_PROC_NUMBER=8
[2025-06-26 05:22:31] Set ATHENA_CORE_NUMBER=8
[2025-06-26 05:22:31] Starting ATLAS job with PandaID=6708444546
[2025-06-26 05:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-26 18:55:15]  *** The last 200 lines of the pilot log: ***
[2025-06-26 18:55:15] 2025-06-26 22:54:32,408 | INFO     | total number of processed events: 1000 (read)
[2025-06-26 18:55:15] 2025-06-26 22:54:32,428 | INFO     | executing command: lscpu
[2025-06-26 18:55:15] 2025-06-26 22:54:32,674 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-26 18:55:15] 2025-06-26 22:54:34,429 | INFO     | monitor loop #3362: job 0:6708444546 is in state 'finished'
[2025-06-26 18:55:15] 2025-06-26 22:54:34,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:55:15] 2025-06-26 22:54:36,921 | INFO     | PID=227263 has CPU usage=16.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-26 18:55:15] 2025-06-26 22:54:36,922 | INFO     | .. there are 15 such processes running
[2025-06-26 18:55:15] 2025-06-26 22:54:36,932 | INFO     | monitor loop #3363: job 0:6708444546 is in state 'finished'
[2025-06-26 18:55:15] 2025-06-26 22:54:36,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:55:15] 2025-06-26 22:54:39,437 | INFO     | monitor loop #3364: job 0:6708444546 is in state 'finished'
[2025-06-26 18:55:15] 2025-06-26 22:54:39,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:55:15] 2025-06-26 22:54:41,942 | INFO     | monitor loop #3365: job 0:6708444546 is in state 'finished'
[2025-06-26 18:55:15] 2025-06-26 22:54:41,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-26 18:55:15] 2025-06-26 22:54:42,896 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-26 18:55:15] 2025-06-26 22:54:42,910 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2570.37915625
[2025-06-26 18:55:15] 2025-06-26 22:54:42,926 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6708444546/memory_monitor_summary.json (trf name=prmon)
[2025-06-26 18:55:15] 2025-06-26 22:54:42,927 | INFO     | extracted standard info from prmon json
[2025-06-26 18:55:15] 2025-06-26 22:54:42,927 | INFO     | extracted standard memory fields from prmon json
[2025-06-26 18:55:15] 2025-06-26 22:54:42,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-26 18:55:15] 2025-06-26 22:54:42,942 | INFO     | fitting pss+swap vs Time
[2025-06-26 18:55:15] 2025-06-26 22:54:42,943 | INFO     | sum of square deviations: 157580916005.41956
[2025-06-26 18:55:15] 2025-06-26 22:54:42,959 | INFO     | sum of deviations: 458939250141.8961
[2025-06-26 18:55:15] 2025-06-26 22:54:42,959 | INFO     | mean x: 1750954110.632832
[2025-06-26 18:55:15] 2025-06-26 22:54:42,959 | INFO     | mean y: 3284102.736842105
[2025-06-26 18:55:15] 2025-06-26 22:54:42,959 | INFO     | -- intersect: -5096201208.917684
[2025-06-26 18:55:15] 2025-06-26 22:54:42,959 | INFO     | intersect: -5096201208.917684
[2025-06-26 18:55:15] 2025-06-26 22:54:42,961 | INFO     | chi2: 15.134201776237413
[2025-06-26 18:55:15] 2025-06-26 22:54:42,962 | INFO     | sum of square deviations: 154637778391.4627
[2025-06-26 18:55:15] 2025-06-26 22:54:42,976 | INFO     | sum of deviations: 776369060289.9066
[2025-06-26 18:55:15] 2025-06-26 22:54:42,977 | INFO     | mean x: 1750953958.1399748
[2025-06-26 18:55:15] 2025-06-26 22:54:42,977 | INFO     | mean y: 3300553.27112232
[2025-06-26 18:55:15] 2025-06-26 22:54:42,977 | INFO     | -- intersect: -8787478085.896616
[2025-06-26 18:55:15] 2025-06-26 22:54:42,977 | INFO     | intersect: -8787478085.896616
[2025-06-26 18:55:15] 2025-06-26 22:54:42,978 | INFO     | chi2: 11.564102337419339
[2025-06-26 18:55:15] 2025-06-26 22:54:42,978 | INFO     | current chi2=11.564102337419339 (change=23.58961173904511 %)
[2025-06-26 18:55:15] 2025-06-26 22:54:42,978 | INFO     | right removable region: 792
[2025-06-26 18:55:15] 2025-06-26 22:54:42,979 | INFO     | sum of square deviations: 154637226951.4629
[2025-06-26 18:55:15] 2025-06-26 22:54:42,993 | INFO     | sum of deviations: 161778820231.97214
[2025-06-26 18:55:15] 2025-06-26 22:54:42,993 | INFO     | mean x: 1750954263.1399748
[2025-06-26 18:55:15] 2025-06-26 22:54:42,993 | INFO     | mean y: 3299483.6128625474
[2025-06-26 18:55:15] 2025-06-26 22:54:42,994 | INFO     | -- intersect: -1828518899.0320768
[2025-06-26 18:55:15] 2025-06-26 22:54:42,994 | INFO     | intersect: -1828518899.0320768
[2025-06-26 18:55:15] 2025-06-26 22:54:42,995 | INFO     | chi2: 12.327134793497654
[2025-06-26 18:55:15] 2025-06-26 22:54:42,995 | INFO     | current chi2=12.327134793497654 (change=18.547836379102627 %)
[2025-06-26 18:55:15] 2025-06-26 22:54:42,995 | INFO     | left removable region: 10
[2025-06-26 18:55:15] 2025-06-26 22:54:42,996 | INFO     | sum of square deviations: 148291518239.995
[2025-06-26 18:55:15] 2025-06-26 22:54:43,009 | INFO     | sum of deviations: 478089617584.3094
[2025-06-26 18:55:15] 2025-06-26 22:54:43,010 | INFO     | mean x: 1750954232.6496165
[2025-06-26 18:55:15] 2025-06-26 22:54:43,010 | INFO     | mean y: 3323543.698209719
[2025-06-26 18:55:15] 2025-06-26 22:54:43,010 | INFO     | -- intersect: -5641726486.339916
[2025-06-26 18:55:15] 2025-06-26 22:54:43,010 | INFO     | intersect: -5641726486.339916
[2025-06-26 18:55:15] 2025-06-26 22:54:43,011 | INFO     | chi2: 7.797141706393301
[2025-06-26 18:55:15] 2025-06-26 22:54:43,011 | INFO     | -- intersect: -5641726486.339916
[2025-06-26 18:55:15] 2025-06-26 22:54:43,012 | INFO     | current memory leak: 3.22 B/s (using 782 data points, chi2=7.80)
[2025-06-26 18:55:15] 2025-06-26 22:54:43,013 | INFO     | could have reported an average CPU frequency of 2759 MHz (30 samples)
[2025-06-26 18:55:15] 2025-06-26 22:54:43,013 | INFO     | ..............................
[2025-06-26 18:55:15] 2025-06-26 22:54:43,013 | INFO     | . Timing measurements:
[2025-06-26 18:55:15] 2025-06-26 22:54:43,013 | INFO     | . get job = 0 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . initial setup = 2 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . payload setup = 13 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . stage-in = 0 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . payload execution = 48665 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . stage-out = 3 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | . log creation = 0 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,014 | INFO     | ..............................
[2025-06-26 18:55:15] 2025-06-26 22:54:43,115 | INFO     | 
[2025-06-26 18:55:15] 2025-06-26 22:54:43,115 | INFO     | job summary report
[2025-06-26 18:55:15] 2025-06-26 22:54:43,115 | INFO     | --------------------------------------------------
[2025-06-26 18:55:15] 2025-06-26 22:54:43,115 | INFO     | PanDA job id: 6708444546
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | task id: 45367070
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | errors: (none)
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | pilot state: finished 
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | transexitcode: 0
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | exeerrorcode: 0
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | exeerrordiag: 
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | exitcode: 0
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | exitmsg: OK
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | cpuconsumptiontime: 185674 s
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | nevents: 1000
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | neventsw: 0
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | pid: 258073
[2025-06-26 18:55:15] 2025-06-26 22:54:43,116 | INFO     | pgrp: 258073
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | corecount: 8
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | event service: False
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | sizes: {0: 2359361, 6: 2359623, 11: 2359651, 48682: 2427403, 48687: 2444239, 48690: 2444295, 48702: 2444669}
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | --------------------------------------------------
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | 
[2025-06-26 18:55:15] 2025-06-26 22:54:43,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-26 18:55:15] 2025-06-26 22:54:43,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | job 6708444546 has completed (purged errors)
[2025-06-26 18:55:15] 2025-06-26 22:54:43,207 | INFO     | overall cleanup function is called
[2025-06-26 18:55:15] 2025-06-26 22:54:44,222 | INFO     | --- collectZombieJob: --- 10, [258073]
[2025-06-26 18:55:15] 2025-06-26 22:54:44,223 | INFO     | zombie collector waiting for pid 258073
[2025-06-26 18:55:15] 2025-06-26 22:54:44,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-26 18:55:15] 2025-06-26 22:54:44,223 | INFO     | collected zombie processes
[2025-06-26 18:55:15] 2025-06-26 22:54:44,223 | INFO     | will attempt to kill all subprocesses of pid=258073
[2025-06-26 18:55:15] 2025-06-26 22:54:44,522 | INFO     | process IDs to be killed: [258073] (in reverse order)
[2025-06-26 18:55:15] 2025-06-26 22:54:44,654 | WARNING  | found no corresponding commands to process id(s)
[2025-06-26 18:55:15] 2025-06-26 22:54:44,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-26 18:55:15] 2025-06-26 22:54:44,665 | INFO     | did not find any defunct processes belonging to 258073
[2025-06-26 18:55:15] 2025-06-26 22:54:44,676 | INFO     | did not find any defunct processes belonging to 258073
[2025-06-26 18:55:15] 2025-06-26 22:54:44,676 | INFO     | ready for new job
[2025-06-26 18:55:15] 2025-06-26 22:54:44,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-26 18:55:15] 2025-06-26 22:54:44,680 | INFO     | ***************************************
[2025-06-26 18:55:15] 2025-06-26 22:54:44,680 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-26 18:55:15] 2025-06-26 22:54:44,680 | INFO     | ***************************************
[2025-06-26 18:55:15] 2025-06-26 22:54:44,681 | INFO     | 
[2025-06-26 18:55:15] 2025-06-26 22:54:44,685 | INFO     | architecture information:
[2025-06-26 18:55:15] 2025-06-26 22:54:44,686 | INFO     | executing command: cat /etc/os-release
[2025-06-26 18:55:15] 2025-06-26 22:54:44,710 | INFO     | cat /etc/os-release:
[2025-06-26 18:55:15] NAME="CentOS Linux"
[2025-06-26 18:55:15] VERSION="7 (Core)"
[2025-06-26 18:55:15] ID="centos"
[2025-06-26 18:55:15] ID_LIKE="rhel fedora"
[2025-06-26 18:55:15] VERSION_ID="7"
[2025-06-26 18:55:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-26 18:55:15] ANSI_COLOR="0;31"
[2025-06-26 18:55:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-26 18:55:15] HOME_URL="https://www.centos.org/"
[2025-06-26 18:55:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-26 18:55:15] 
[2025-06-26 18:55:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-26 18:55:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-26 18:55:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-26 18:55:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-26 18:55:15] 
[2025-06-26 18:55:15] 2025-06-26 22:54:44,710 | INFO     | ***************************************
[2025-06-26 18:55:15] 2025-06-26 22:54:45,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-26 18:55:15] 2025-06-26 22:54:45,256 | INFO     | sufficient remaining disk space (102355697664 B)
[2025-06-26 18:55:15] 2025-06-26 22:54:45,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-26 18:55:15] 2025-06-26 22:54:45,256 | INFO     | current server update state: UPDATING_FINAL
[2025-06-26 18:55:15] 2025-06-26 22:54:45,256 | INFO     | update_server=False
[2025-06-26 18:55:15] 2025-06-26 22:54:45,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-26 18:55:15] 2025-06-26 22:54:45,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-26 18:55:15] 2025-06-26 22:54:45,458 | INFO     | aborting loop
[2025-06-26 18:55:15] 2025-06-26 22:54:45,509 | INFO     | all payload control threads have been joined
[2025-06-26 18:55:15] 2025-06-26 22:54:45,744 | INFO     | all data control threads have been joined
[2025-06-26 18:55:15] 2025-06-26 22:54:46,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-26 18:55:15] 2025-06-26 22:54:46,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-26 18:55:15] 2025-06-26 22:54:46,262 | INFO     | [job] retrieve thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,426 | INFO     | [job] create_data_payload thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,463 | INFO     | [job] job monitor thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,512 | INFO     | [payload] execute_payloads thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,514 | INFO     | [payload] control thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,663 | INFO     | [payload] validate_post thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,681 | INFO     | all job control threads have been joined
[2025-06-26 18:55:15] 2025-06-26 22:54:46,746 | INFO     | [data] control thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,961 | INFO     | [data] copytool_in thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:46,961 | INFO     | [payload] validate_pre thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:47,447 | INFO     | [job] validate thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:47,686 | INFO     | [job] control thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:47,847 | INFO     | [payload] failed_post thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:48,013 | INFO     | [data] copytool_out thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:48,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-26 18:55:15] 2025-06-26 22:54:49,132 | INFO     | [job] queue monitor thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:50,024 | INFO     | [data] queue_monitor thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:55,598 | INFO     | job.realtimelogging is not enabled
[2025-06-26 18:55:15] 2025-06-26 22:54:56,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-26 18:55:15] 2025-06-26 22:54:58,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533857466176)>', '<ExcThread(monitor, started 140533200578304)>']
[2025-06-26 18:55:15] 2025-06-26 22:55:03,239 | INFO     | all workflow threads have been joined
[2025-06-26 18:55:15] 2025-06-26 22:55:03,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-26 18:55:15] 2025-06-26 22:55:03,239 | INFO     | traces error code: 0
[2025-06-26 18:55:15] 2025-06-26 22:55:03,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-26 18:55:15] 2025-06-26 22:55:15,347 | INFO     | PID=227263 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-26 18:55:15] 2025-06-26 22:55:15,347 | INFO     | .. there are 15 such processes running
[2025-06-26 18:55:15] 2025-06-26 22:55:15,348 | INFO     | found 0 job(s) in 20 queues
[2025-06-26 18:55:15] 2025-06-26 22:55:15,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-26 18:55:15] 2025-06-26 22:55:15,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-26 18:55:15] 2025-06-26 22:55:15,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-26 18:55:15] 2025-06-26 22:55:15,348 | INFO     | [monitor] control thread has ended
[2025-06-26 18:55:15] 2025-06-26 22:55:15,597 [wrapper] ==== pilot stdout END ====
[2025-06-26 18:55:15] 2025-06-26 22:55:15,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-26 18:55:15] 2025-06-26 22:55:15,607 [wrapper] pilotpid: 227263
[2025-06-26 18:55:15] 2025-06-26 22:55:15,611 [wrapper] Pilot exit status: 0
[2025-06-26 18:55:15] 2025-06-26 22:55:15,628 [wrapper] pandaids: 6708444546
[2025-06-26 18:55:15] 2025-06-26 22:55:15,720 [wrapper] cleanup supervisor_pilot 107720 227265
[2025-06-26 18:55:15] 2025-06-26 22:55:15,724 [wrapper] Test setup, not cleaning
[2025-06-26 18:55:15] 2025-06-26 22:55:15,729 [wrapper] apfmon messages muted
[2025-06-26 18:55:15] 2025-06-26 22:55:15,733 [wrapper] ==== wrapper stdout END ====
[2025-06-26 18:55:15] 2025-06-26 22:55:15,737 [wrapper] ==== wrapper stderr END ====
[2025-06-26 18:55:15]  *** Error codes and diagnostics ***
[2025-06-26 18:55:15]     "exeErrorCode": 0,
[2025-06-26 18:55:15]     "exeErrorDiag": "",
[2025-06-26 18:55:15]     "pilotErrorCode": 0,
[2025-06-26 18:55:15]     "pilotErrorDiag": "",
[2025-06-26 18:55:15]  *** Listing of results directory ***
[2025-06-26 18:55:15] total 943352
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas    530466 Jun 26 05:12 pilot3.tar.gz
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas      5112 Jun 26 05:19 queuedata.json
[2025-06-26 18:55:15] -rwx------ 1 boincer umatlas     36245 Jun 26 05:20 runpilot2-wrapper.sh
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas       100 Jun 26 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-26 18:55:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 05:21 run_atlas
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas       105 Jun 26 05:21 job.xml
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas 330898986 Jun 26 05:22 EVNT.45367068._000009.pool.root.1
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas     15095 Jun 26 05:22 start_atlas.sh
[2025-06-26 18:55:15] drwxrwx--x 2 boincer umatlas      4096 Jun 26 05:22 shared
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas    543070 Jun 26 05:22 input.tar.gz
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas         0 Jun 26 05:22 boinc_lockfile
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas      2905 Jun 26 05:22 pandaJob.out
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas    967554 Jun 26 05:22 agis_schedconf.cvmfs.json
[2025-06-26 18:55:15] drwx------ 4 boincer umatlas      4096 Jun 26 05:22 pilot3
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas       533 Jun 26 18:31 boinc_task_state.xml
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas      6301 Jun 26 18:48 init_data.xml
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas 618685934 Jun 26 18:53 HITS.45367070._000024.pool.root.1
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas      1077 Jun 26 18:54 memory_monitor_summary.json
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas   1574086 Jun 26 18:54 agis_ddmendpoints.agis.ALL.json
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas   1906553 Jun 26 18:54 log.45367070._000024.job.log.tgz.1
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas     28239 Jun 26 18:54 heartbeat.json
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 18:55 boinc_mmap_file
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas        29 Jun 26 18:55 wrapper_checkpoint.txt
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas        95 Jun 26 18:55 pilot_heartbeat.json
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas       822 Jun 26 18:55 pilotlog.txt
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas   4354002 Jun 26 18:55 log.45367070._000024.job.log.1
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas       353 Jun 26 18:55 output.list
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas       620 Jun 26 18:55 runtime_log
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas   6297600 Jun 26 18:55 result.tar.gz
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas      8671 Jun 26 18:55 runtime_log.err
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas       668 Jun 26 18:55 EEsNDmjxxo7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme2zKDmTkOCPo.diag
[2025-06-26 18:55:15] -rw-r--r-- 1 boincer umatlas     21360 Jun 26 18:55 stderr.txt
[2025-06-26 18:55:15] HITS file was successfully produced:
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas 618685934 Jun 26 18:53 shared/HITS.pool.root.1
[2025-06-26 18:55:15]  *** Contents of shared directory: ***
[2025-06-26 18:55:15] total 934040
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas 330898986 Jun 26 05:22 ATLAS.root_0
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas     15095 Jun 26 05:22 start_atlas.sh
[2025-06-26 18:55:15] -rw-r--r-- 2 boincer umatlas    543070 Jun 26 05:22 input.tar.gz
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas 618685934 Jun 26 18:53 HITS.pool.root.1
[2025-06-26 18:55:15] -rw------- 1 boincer umatlas   6297600 Jun 26 18:55 result.tar.gz
18:55:17 (211545): run_atlas exited; CPU time 185876.019426
18:55:17 (211545): called boinc_finish(0)

</stderr_txt>
]]>

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