Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:15:54 (14205): wrapper (7.7.26015): starting
23:15:54 (14205): wrapper: running run_atlas (--nthreads 4)
[2025-06-24 23:15:54] Arguments: --nthreads 4
[2025-06-24 23:15:54] Threads: 4
[2025-06-24 23:15:54] Checking for CVMFS
[2025-06-24 23:15:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-24 23:15:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-24 23:15:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-24 23:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-24 23:15:56] 2.9.2.0 14401 0 28728 147540 3 1 30844767 36864001 0 130560 0 0 0.000 1291 3164 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-24 23:15:56] CVMFS is ok
[2025-06-24 23:15:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-24 23:15:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-24 23:15:56] Further information can be found at the LHC@home message board.
[2025-06-24 23:15:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-24 23:15:56] Checking for apptainer binary...
[2025-06-24 23:15:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-24 23:15:56] Running /usr/bin/apptainer --version
[2025-06-24 23:15:56] apptainer version 1.4.1-1.1
[2025-06-24 23:15:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-24 23:15:56] thA314
[2025-06-24 23:15:56] apptainer works
[2025-06-24 23:15:56] Set ATHENA_PROC_NUMBER=4
[2025-06-24 23:15:56] Set ATHENA_CORE_NUMBER=4
[2025-06-24 23:15:56] Starting ATLAS job with PandaID=6706599594
[2025-06-24 23:15:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-25 00:47:22]  *** The last 200 lines of the pilot log: ***
[2025-06-25 00:47:22]  is_tar=False
[2025-06-25 00:47:22]  lfn=log.45275320._007355.job.log.tgz.1
[2025-06-25 00:47:22]  mtime=0
[2025-06-25 00:47:22]  protocol_id=None
[2025-06-25 00:47:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-25 00:47:22]  replicas=None
[2025-06-25 00:47:22]  scope=mc23_13p6TeV
[2025-06-25 00:47:22]  status=None
[2025-06-25 00:47:22]  status_code=0
[2025-06-25 00:47:22]  storage_token=
[2025-06-25 00:47:22]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6706599594/log.45275320._007355.job.log.tgz.1
[2025-06-25 00:47:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/32/log.45275320._007355.job.log.tgz.1
[2025-06-25 00:47:22]  workdir=None
[2025-06-25 00:47:22] ]
[2025-06-25 00:47:22] 2025-06-24 22:46:45,035 | INFO     | transferring file log.45275320._007355.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6706599594/log.45275320._007355.job.log.tgz.1 to /local/data/boinc/
[2025-06-25 00:47:22] 2025-06-24 22:46:45,035 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6706599594/log.45275320._007355.job.log.tgz.1 /local/data/boinc/slots/0/log.45275320._0073
[2025-06-25 00:47:22] 2025-06-24 22:46:45,053 | INFO     | adding to output.list: log.45275320._007355.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/32/log.45275320._007355.job.log.tg
[2025-06-25 00:47:22] 2025-06-24 22:46:45,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-25 00:47:22] 2025-06-24 22:46:45,053 | INFO     | summary of transferred files:
[2025-06-25 00:47:22] 2025-06-24 22:46:45,054 | INFO     |  -- lfn=log.45275320._007355.job.log.tgz.1, status_code=0, status=transferred
[2025-06-25 00:47:22] 2025-06-24 22:46:45,054 | INFO     | stage-out finished correctly
[2025-06-25 00:47:22] 2025-06-24 22:46:45,112 | INFO     | monitor loop #417: job 0:6706599594 is in state 'finished'
[2025-06-25 00:47:22] 2025-06-24 22:46:45,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-25 00:47:22] 2025-06-24 22:46:46,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-25 00:47:22] 2025-06-24 22:46:46,862 | INFO     | job 6706599594 has state=finished
[2025-06-25 00:47:22] 2025-06-24 22:46:46,862 | INFO     | preparing for final server update for job 6706599594 in state='finished'
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | this job has now completed (state=finished)
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | log transfer has been attempted: DONE
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | job 6706599594 has finished - writing final server update
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | total number of processed events: 400 (read)
[2025-06-25 00:47:22] 2025-06-24 22:46:46,863 | INFO     | executing command: lscpu
[2025-06-25 00:47:22] 2025-06-24 22:46:46,885 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-25 00:47:22] 2025-06-24 22:46:47,615 | INFO     | monitor loop #418: job 0:6706599594 is in state 'finished'
[2025-06-25 00:47:22] 2025-06-24 22:46:47,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,119 | INFO     | monitor loop #419: job 0:6706599594 is in state 'finished'
[2025-06-25 00:47:22] 2025-06-24 22:46:50,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,250 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-25 00:47:22] 2025-06-24 22:46:50,253 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3635.0840624999996
[2025-06-25 00:47:22] 2025-06-24 22:46:50,255 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6706599594/memory_monitor_summary.json (trf name=prmon)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,256 | INFO     | extracted standard info from prmon json
[2025-06-25 00:47:22] 2025-06-24 22:46:50,256 | INFO     | extracted standard memory fields from prmon json
[2025-06-25 00:47:22] 2025-06-24 22:46:50,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-25 00:47:22] 2025-06-24 22:46:50,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-25 00:47:22] 2025-06-24 22:46:50,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | fitting pss+swap vs Time
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | sum of square deviations: 170944600.5
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | sum of deviations: -1360629979.5
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | mean x: 1750802568.5
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | mean y: 2439157.0853658537
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | -- intersect: 13937915656.015219
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | intersect: 13937915656.015219
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | chi2: 0.054676696389348856
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | -- intersect: 13937915656.015219
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | current memory leak: -7.96 B/s (using 82 data points, chi2=0.05)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,257 | INFO     | could have reported an average CPU frequency of 3678 MHz (7 samples)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | ..............................
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . Timing measurements:
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . get job = 0 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . initial setup = 1 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . payload setup = 5 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . stage-in = 0 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . payload execution = 5412 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . stage-out = 0 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | . log creation = 0 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,258 | INFO     | ..............................
[2025-06-25 00:47:22] 2025-06-24 22:46:50,338 | INFO     | PID=18474 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,468 | INFO     | 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,468 | INFO     | job summary report
[2025-06-25 00:47:22] 2025-06-24 22:46:50,468 | INFO     | --------------------------------------------------
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | PanDA job id: 6706599594
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | task id: 45275320
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | errors: (none)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | pilot state: finished 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | transexitcode: 0
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | exeerrorcode: 0
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | exeerrordiag: 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | exitcode: 0
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | exitmsg: OK
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | cpuconsumptiontime: 20629 s
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | nevents: 400
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | neventsw: 0
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | pid: 25123
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | pgrp: 25123
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | corecount: 4
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | event service: False
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | sizes: {0: 2369527, 4: 2369789, 11: 2369817, 5422: 2405513, 5423: 2405513, 5427: 2405707}
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | --------------------------------------------------
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | 
[2025-06-25 00:47:22] 2025-06-24 22:46:50,469 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | job 6706599594 has completed (purged errors)
[2025-06-25 00:47:22] 2025-06-24 22:46:50,490 | INFO     | overall cleanup function is called
[2025-06-25 00:47:22] 2025-06-24 22:46:51,497 | INFO     | --- collectZombieJob: --- 10, [25123]
[2025-06-25 00:47:22] 2025-06-24 22:46:51,497 | INFO     | zombie collector waiting for pid 25123
[2025-06-25 00:47:22] 2025-06-24 22:46:51,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-25 00:47:22] 2025-06-24 22:46:51,497 | INFO     | collected zombie processes
[2025-06-25 00:47:22] 2025-06-24 22:46:51,497 | INFO     | will attempt to kill all subprocesses of pid=25123
[2025-06-25 00:47:22] 2025-06-24 22:46:51,541 | INFO     | process IDs to be killed: [25123] (in reverse order)
[2025-06-25 00:47:22] 2025-06-24 22:46:51,573 | WARNING  | found no corresponding commands to process id(s)
[2025-06-25 00:47:22] 2025-06-24 22:46:51,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-25 00:47:22] 2025-06-24 22:46:51,575 | INFO     | did not find any defunct processes belonging to 25123
[2025-06-25 00:47:22] 2025-06-24 22:46:51,576 | INFO     | did not find any defunct processes belonging to 25123
[2025-06-25 00:47:22] 2025-06-24 22:46:51,576 | INFO     | ready for new job
[2025-06-25 00:47:22] 2025-06-24 22:46:51,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-25 00:47:22] 2025-06-24 22:46:51,577 | INFO     | ***************************************
[2025-06-25 00:47:22] 2025-06-24 22:46:51,577 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-25 00:47:22] 2025-06-24 22:46:51,577 | INFO     | ***************************************
[2025-06-25 00:47:22] 2025-06-24 22:46:51,577 | INFO     | 
[2025-06-25 00:47:22] 2025-06-24 22:46:51,578 | INFO     | architecture information:
[2025-06-25 00:47:22] 2025-06-24 22:46:51,578 | INFO     | executing command: cat /etc/os-release
[2025-06-25 00:47:22] 2025-06-24 22:46:51,591 | INFO     | cat /etc/os-release:
[2025-06-25 00:47:22] NAME="CentOS Linux"
[2025-06-25 00:47:22] VERSION="7 (Core)"
[2025-06-25 00:47:22] ID="centos"
[2025-06-25 00:47:22] ID_LIKE="rhel fedora"
[2025-06-25 00:47:22] VERSION_ID="7"
[2025-06-25 00:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-25 00:47:22] ANSI_COLOR="0;31"
[2025-06-25 00:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-25 00:47:22] HOME_URL="https://www.centos.org/"
[2025-06-25 00:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-25 00:47:22] 
[2025-06-25 00:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-25 00:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-25 00:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-25 00:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-25 00:47:22] 
[2025-06-25 00:47:22] 2025-06-24 22:46:51,592 | INFO     | ***************************************
[2025-06-25 00:47:22] 2025-06-24 22:46:52,095 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-25 00:47:22] 2025-06-24 22:46:52,112 | INFO     | sufficient remaining disk space (225526677504 B)
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | INFO     | current server update state: UPDATING_FINAL
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | INFO     | update_server=False
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-25 00:47:22] 2025-06-24 22:46:52,113 | INFO     | aborting loop
[2025-06-25 00:47:22] 2025-06-24 22:46:52,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-25 00:47:22] 2025-06-24 22:46:52,889 | INFO     | all data control threads have been joined
[2025-06-25 00:47:22] 2025-06-24 22:46:53,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-25 00:47:22] 2025-06-24 22:46:53,119 | INFO     | [job] retrieve thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,119 | INFO     | [job] queue monitor thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,119 | INFO     | [job] job monitor thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,132 | INFO     | [payload] execute_payloads thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,192 | INFO     | [job] create_data_payload thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,250 | INFO     | [payload] validate_pre thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,574 | INFO     | all job control threads have been joined
[2025-06-25 00:47:22] 2025-06-24 22:46:53,609 | INFO     | all payload control threads have been joined
[2025-06-25 00:47:22] 2025-06-24 22:46:53,674 | INFO     | [payload] validate_post thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,753 | INFO     | [data] copytool_in thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:53,895 | INFO     | [data] control thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:54,297 | INFO     | [payload] failed_post thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:54,580 | INFO     | [job] control thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:54,594 | INFO     | [job] validate thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:54,615 | INFO     | [payload] control thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:55,112 | INFO     | [data] copytool_out thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:56,442 | INFO     | [data] queue_monitor thread has finished
[2025-06-25 00:47:22] 2025-06-24 22:46:57,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747460593472)>', '<ExcThread(monitor, started 139746089105152)>']
[2025-06-25 00:47:22] 2025-06-24 22:47:02,858 | INFO     | all workflow threads have been joined
[2025-06-25 00:47:22] 2025-06-24 22:47:02,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-25 00:47:22] 2025-06-24 22:47:02,859 | INFO     | traces error code: 0
[2025-06-25 00:47:22] 2025-06-24 22:47:02,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | INFO     | PID=18474 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | INFO     | found 0 job(s) in 20 queues
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-25 00:47:22] 2025-06-24 22:47:22,467 | INFO     | [monitor] control thread has ended
[2025-06-25 00:47:22] 2025-06-24 22:47:22,541 [wrapper] ==== pilot stdout END ====
[2025-06-25 00:47:22] 2025-06-24 22:47:22,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-25 00:47:22] 2025-06-24 22:47:22,549 [wrapper] pilotpid: 18474
[2025-06-25 00:47:22] 2025-06-24 22:47:22,553 [wrapper] Pilot exit status: 0
[2025-06-25 00:47:22] 2025-06-24 22:47:22,566 [wrapper] pandaids: 6706599594
[2025-06-25 00:47:22] 2025-06-24 22:47:22,589 [wrapper] cleanup supervisor_pilot   37630 18475
[2025-06-25 00:47:22] 2025-06-24 22:47:22,593 [wrapper] Test setup, not cleaning
[2025-06-25 00:47:22] 2025-06-24 22:47:22,597 [wrapper] apfmon messages muted
[2025-06-25 00:47:22] 2025-06-24 22:47:22,600 [wrapper] ==== wrapper stdout END ====
[2025-06-25 00:47:22] 2025-06-24 22:47:22,604 [wrapper] ==== wrapper stderr END ====
[2025-06-25 00:47:22]  *** Error codes and diagnostics ***
[2025-06-25 00:47:22]     "exeErrorCode": 0,
[2025-06-25 00:47:22]     "exeErrorDiag": "",
[2025-06-25 00:47:22]     "pilotErrorCode": 0,
[2025-06-25 00:47:22]     "pilotErrorDiag": "",
[2025-06-25 00:47:22]  *** Listing of results directory ***
[2025-06-25 00:47:22] total 516512
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc    530466 Jun 24 23:00 pilot3.tar.gz
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc      5112 Jun 24 23:13 queuedata.json
[2025-06-25 00:47:22] -rwx------ 1 boinc boinc     36245 Jun 24 23:14 runpilot2-wrapper.sh
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc       100 Jun 24 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-25 00:47:22] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 23:15 run_atlas
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc       105 Jun 24 23:15 job.xml
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc 289025402 Jun 24 23:15 EVNT.45275317._000291.pool.root.1
[2025-06-25 00:47:22] drwxrwx--x 2 boinc boinc      4096 Jun 24 23:15 shared
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc    542884 Jun 24 23:15 input.tar.gz
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc     15095 Jun 24 23:15 start_atlas.sh
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc         0 Jun 24 23:15 boinc_setup_complete
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc      6455 Jun 24 23:15 init_data.xml
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc         0 Jun 24 23:15 boinc_lockfile
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc      2551 Jun 24 23:15 pandaJob.out
[2025-06-25 00:47:22] -rw------- 1 boinc boinc    955262 Jun 24 23:16 agis_schedconf.cvmfs.json
[2025-06-25 00:47:22] -rw------- 1 boinc boinc   1576790 Jun 24 23:16 agis_ddmendpoints.agis.ALL.json
[2025-06-25 00:47:22] drwx------ 4 boinc boinc      4096 Jun 24 23:16 pilot3
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc       529 Jun 25 00:46 boinc_task_state.xml
[2025-06-25 00:47:22] -rw------- 1 boinc boinc 234525029 Jun 25 00:46 HITS.45275320._007355.pool.root.1
[2025-06-25 00:47:22] -rw------- 1 boinc boinc        95 Jun 25 00:46 pilot_heartbeat.json
[2025-06-25 00:47:22] -rw------- 1 boinc boinc      1017 Jun 25 00:46 memory_monitor_summary.json
[2025-06-25 00:47:22] -rw------- 1 boinc boinc    239773 Jun 25 00:46 log.45275320._007355.job.log.tgz.1
[2025-06-25 00:47:22] -rw------- 1 boinc boinc      7749 Jun 25 00:46 heartbeat.json
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc        27 Jun 25 00:47 wrapper_checkpoint.txt
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc      8192 Jun 25 00:47 boinc_mmap_file
[2025-06-25 00:47:22] -rw------- 1 boinc boinc       745 Jun 25 00:47 pilotlog.txt
[2025-06-25 00:47:22] -rw------- 1 boinc boinc    523291 Jun 25 00:47 log.45275320._007355.job.log.1
[2025-06-25 00:47:22] -rw------- 1 boinc boinc       357 Jun 25 00:47 output.list
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc       620 Jun 25 00:47 runtime_log
[2025-06-25 00:47:22] -rw------- 1 boinc boinc    778240 Jun 25 00:47 result.tar.gz
[2025-06-25 00:47:22] -rw------- 1 boinc boinc       659 Jun 25 00:47 wPXNDm48Po7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNlzKDm2Yp3pm.diag
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc      8734 Jun 25 00:47 runtime_log.err
[2025-06-25 00:47:22] -rw-r--r-- 1 boinc boinc     21648 Jun 25 00:47 stderr.txt
[2025-06-25 00:47:22] HITS file was successfully produced:
[2025-06-25 00:47:22] -rw------- 1 boinc boinc 234525029 Jun 25 00:46 shared/HITS.pool.root.1
[2025-06-25 00:47:22]  *** Contents of shared directory: ***
[2025-06-25 00:47:22] total 512600
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc 289025402 Jun 24 23:15 ATLAS.root_0
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc    542884 Jun 24 23:15 input.tar.gz
[2025-06-25 00:47:22] -rw-r--r-- 2 boinc boinc     15095 Jun 24 23:15 start_atlas.sh
[2025-06-25 00:47:22] -rw------- 1 boinc boinc 234525029 Jun 25 00:46 HITS.pool.root.1
[2025-06-25 00:47:22] -rw------- 1 boinc boinc    778240 Jun 25 00:47 result.tar.gz
00:47:24 (14205): run_atlas exited; CPU time 20648.325286
00:47:24 (14205): called boinc_finish(0)

</stderr_txt>
]]>

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