Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-23 03:03:33 (777820): Detected: vboxwrapper 26206
2025-06-23 03:03:33 (777820): Detected: BOINC client v8.2.4
2025-06-23 03:03:33 (777820): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-06-23 03:03:34 (777820): Successfully copied 'init_data.xml' to the shared directory.
2025-06-23 03:03:34 (777820): Create VM. (boinc_a714c34962047037, slot#74)
2025-06-23 03:03:35 (777820): Setting Memory Size for VM. (4096MB)
2025-06-23 03:03:35 (777820): Setting CPU Count for VM. (1)
2025-06-23 03:03:35 (777820): Setting Chipset Options for VM.
2025-06-23 03:03:35 (777820): Setting Graphics Controller Options for VM.
2025-06-23 03:03:36 (777820): Setting Boot Options for VM.
2025-06-23 03:03:36 (777820): Setting Network Configuration for NAT.
2025-06-23 03:03:36 (777820): Enabling VM Network Access.
2025-06-23 03:03:36 (777820): Disabling USB Support for VM.
2025-06-23 03:03:37 (777820): Disabling COM Port Support for VM.
2025-06-23 03:03:37 (777820): Disabling LPT Port Support for VM.
2025-06-23 03:03:37 (777820): Disabling Audio Support for VM.
2025-06-23 03:03:37 (777820): Disabling Clipboard Support for VM.
2025-06-23 03:03:38 (777820): Disabling Drag and Drop Support for VM.
2025-06-23 03:03:38 (777820): Adding storage controller(s) to VM.
2025-06-23 03:03:38 (777820): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-23 03:03:39 (777820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-23 03:03:39 (777820): forwarding host port 46851 to guest port 80
2025-06-23 03:03:39 (777820): Enabling remote desktop for VM.
2025-06-23 03:03:39 (777820): Enabling shared directory for VM.
2025-06-23 03:03:40 (777820): Starting VM using VBoxManage interface. (boinc_a714c34962047037, slot#74)
2025-06-23 03:03:42 (777820): Successfully started VM. (PID = '778231')
2025-06-23 03:03:42 (777820): Reporting VM Process ID to BOINC.
2025-06-23 03:03:42 (777820): Guest Log: BIOS: VirtualBox 7.0.20
2025-06-23 03:03:42 (777820): Guest Log: CPUID EDX: 0x178bfbff
2025-06-23 03:03:42 (777820): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-23 03:03:42 (777820): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-23 03:03:42 (777820): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-23 03:03:42 (777820): Detected: Web Application Enabled (http://localhost:46851)
2025-06-23 03:03:42 (777820): Detected: Remote Desktop Enabled (localhost:33429)
2025-06-23 03:03:42 (777820): Preference change detected
2025-06-23 03:03:42 (777820): Setting CPU throttle for VM. (100%)
2025-06-23 03:03:42 (777820): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-23 03:03:44 (777820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-23 03:03:44 (777820): Guest Log: BIOS: Booting from Hard Disk...
2025-06-23 03:03:47 (777820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-23 03:03:47 (777820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-23 03:03:47 (777820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-23 03:03:51 (777820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-23 03:03:51 (777820): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-23 03:04:05 (777820): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000340 main     Log opened 2025-06-23T01:04:03.768293000Z
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000462 main     OS Product: Linux
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000503 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000527 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000552 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000553 main     Process ID: 1255
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.000553 main     Package type: LINUX_64BITS_GENERIC
2025-06-23 03:04:05 (777820): Guest Log: 00:00:00.002900 main     5.2.32 r132073 started. Verbose level = 0
2025-06-23 03:04:05 (777820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-23 03:04:05 (777820): Guest Log: [INFO] Mounting shared directory
2025-06-23 03:04:05 (777820): Guest Log: [INFO] Checking for init_data.xml
2025-06-23 03:04:06 (777820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-23 03:04:06 (777820): Guest Log: [INFO] Detected branch: prod
2025-06-23 03:04:07 (777820): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-23 03:04:07 (777820): Guest Log: Copying input files
2025-06-23 03:04:09 (777820): Guest Log: Copied input files into RunAtlas.
2025-06-23 03:04:09 (777820): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-06-23 03:04:16 (777820): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-23 03:04:16 (777820): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-23 03:04:16 (777820): Guest Log: 2.6.3.0 1524 0 29516 147471 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-06-23 03:04:17 (777820): Guest Log: copied the webapp to /var/www
2025-06-23 03:04:17 (777820): Guest Log: core_number=1
2025-06-23 03:04:17 (777820): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-23 03:04:17 (777820): Guest Log:  *** Starting ATLAS job. (PandaID=6704611352 taskID=45275300) ***
2025-06-23 04:42:42 (777820): Status Report: Elapsed Time: '6000.000000'
2025-06-23 04:42:42 (777820): Status Report: CPU Time: '5911.710000'
2025-06-23 06:21:42 (777820): Status Report: Elapsed Time: '12000.000000'
2025-06-23 06:21:42 (777820): Status Report: CPU Time: '11855.830000'
2025-06-23 08:00:43 (777820): Status Report: Elapsed Time: '18000.000000'
2025-06-23 08:00:43 (777820): Status Report: CPU Time: '17797.980000'
2025-06-23 09:39:43 (777820): Status Report: Elapsed Time: '24000.000000'
2025-06-23 09:39:43 (777820): Status Report: CPU Time: '23740.730000'
2025-06-23 11:18:43 (777820): Status Report: Elapsed Time: '30000.000000'
2025-06-23 11:18:43 (777820): Status Report: CPU Time: '29684.350000'
2025-06-23 12:57:44 (777820): Status Report: Elapsed Time: '36000.000000'
2025-06-23 12:57:44 (777820): Status Report: CPU Time: '35627.000000'
2025-06-23 14:36:44 (777820): Status Report: Elapsed Time: '42000.000000'
2025-06-23 14:36:44 (777820): Status Report: CPU Time: '41572.670000'
2025-06-23 16:15:44 (777820): Status Report: Elapsed Time: '48000.000000'
2025-06-23 16:15:44 (777820): Status Report: CPU Time: '47515.260000'
2025-06-23 17:54:45 (777820): Status Report: Elapsed Time: '54000.000000'
2025-06-23 17:54:45 (777820): Status Report: CPU Time: '53456.450000'
2025-06-23 19:33:45 (777820): Status Report: Elapsed Time: '60000.000000'
2025-06-23 19:33:45 (777820): Status Report: CPU Time: '59396.530000'
2025-06-23 21:12:45 (777820): Status Report: Elapsed Time: '66000.000000'
2025-06-23 21:12:45 (777820): Status Report: CPU Time: '65331.900000'
2025-06-23 21:52:13 (777820): Guest Log:  *** Job finished ***
2025-06-23 21:52:13 (777820): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:51:58,037 | INFO     | all workflow threads have been joined
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:51:58,037 | INFO     | end of generic workflow (traces error code: 0)
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:51:58,038 | INFO     | traces error code: 0
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:51:58,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,017 | INFO     | PID=5773 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,018 | INFO     | found 0 job(s) in 20 queues
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,018 | INFO     | [monitor] control thread has ended
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,143 [wrapper] ==== pilot stdout END ====
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,148 [wrapper] ==== wrapper stdout RESUME ====
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,153 [wrapper] pilotpid: 5773
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,157 [wrapper] Pilot exit status: 0
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,190 [wrapper] pandaids: 6704611352
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,219 [wrapper] cleanup supervisor_pilot  2632 5774
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,224 [wrapper] Test setup, not cleaning
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,229 [wrapper] apfmon messages muted
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,234 [wrapper] ==== wrapper stdout END ====
2025-06-23 21:52:13 (777820): Guest Log: 2025-06-23 19:52:12,239 [wrapper] ==== wrapper stderr END ====
2025-06-23 21:52:13 (777820): Guest Log:  *** Error codes and diagnostics ***
2025-06-23 21:52:13 (777820): Guest Log:     "exeErrorCode": 0,
2025-06-23 21:52:13 (777820): Guest Log:     "exeErrorDiag": "",
2025-06-23 21:52:13 (777820): Guest Log:     "pilotErrorCode": 0,
2025-06-23 21:52:13 (777820): Guest Log:     "pilotErrorDiag": "",
2025-06-23 21:52:13 (777820): Guest Log:  *** Listing of results directory ***
2025-06-23 21:52:13 (777820): Guest Log: total 244236
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 23 00:17 pilot3.tar.gz
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 23 00:47 queuedata.json
2025-06-23 21:52:13 (777820): Guest Log: -rwx------. 1 atlas atlas     36245 Jun 23 00:47 runpilot2-wrapper.sh
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas      9754 Jun 23 01:04 init_data.xml
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas    542890 Jun 23 01:04 input.tar.gz
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jun 23 01:04 start_atlas.sh
2025-06-23 21:52:13 (777820): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 01:04 EVNT.45275298._000119.pool.root.1 -> /data/./ATLAS.root_0
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Jun 23 01:04 pandaJob.out
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas    963126 Jun 23 01:04 agis_schedconf.cvmfs.json
2025-06-23 21:52:13 (777820): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 01:04 pilot3
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas 233197221 Jun 23 19:50 HITS.45275300._003566.pool.root.1
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas      1027 Jun 23 19:51 memory_monitor_summary.json
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas   1576736 Jun 23 19:51 agis_ddmendpoints.agis.ALL.json
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas    745466 Jun 23 19:51 log.45275300._003566.job.log.tgz.1
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas        95 Jun 23 19:51 pilot_heartbeat.json
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas      7817 Jun 23 19:51 heartbeat.json
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas       744 Jun 23 19:52 pilotlog.txt
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas   5816289 Jun 23 19:52 log.45275300._003566.job.log.1
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas       357 Jun 23 19:52 output.list
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 23 19:52 runtime_log
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas   6584320 Jun 23 19:52 result.tar.gz
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 atlas atlas      8473 Jun 23 19:52 runtime_log.err
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas       657 Jun 23 19:52 1mHNDmfWkn7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmzyKDmNrZYIn.diag
2025-06-23 21:52:13 (777820): Guest Log: Looking for outputfile HITS.45275300._003566.pool.root.1
2025-06-23 21:52:13 (777820): Guest Log: HITS file was successfully produced
2025-06-23 21:52:13 (777820): Guest Log: -rw-------. 1 atlas atlas 233197221 Jun 23 19:50 /home/atlas/RunAtlas/HITS.45275300._003566.pool.root.1
2025-06-23 21:52:13 (777820): Guest Log: Successfully finished the ATLAS job!
2025-06-23 21:52:13 (777820): Guest Log: Copying the results back to the shared directory!
2025-06-23 21:52:13 (777820): Guest Log:  *** Contents of shared directory: ***
2025-06-23 21:52:13 (777820): Guest Log: total 293052
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 root root 292918202 Jun 23 01:03 ATLAS.root_0
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 root root      9754 Jun 23 01:03 init_data.xml
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 root root    542890 Jun 23 01:03 input.tar.gz
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 root root   6584320 Jun 23 19:52 result.tar.gz
2025-06-23 21:52:13 (777820): Guest Log: -rw-r--r--. 1 root root     15095 Jun 23 01:03 start_atlas.sh
2025-06-23 21:52:13 (777820): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-23 21:52:13 (777820): VM Completion File Detected.
2025-06-23 21:52:13 (777820): Powering off VM.
2025-06-23 21:52:14 (777820): Successfully stopped VM.
2025-06-23 21:52:14 (777820): Deregistering VM. (boinc_a714c34962047037, slot#74)
2025-06-23 21:52:14 (777820): Removing network bandwidth throttle group from VM.
2025-06-23 21:52:14 (777820): Removing VM from VirtualBox.
21:52:19 (777820): called boinc_finish(0)

</stderr_txt>
]]>

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