Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-20 07:47:17 (42140): Detected: vboxwrapper 26206
2025-06-20 07:47:17 (42140): Detected: BOINC client v8.0.2
2025-06-20 07:47:18 (42140): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-06-20 07:47:18 (42140): Successfully copied 'init_data.xml' to the shared directory.
2025-06-20 07:47:18 (42140): Create VM. (boinc_92b7f98da1447281, slot#3)
2025-06-20 07:47:19 (42140): Setting Memory Size for VM. (4800MB)
2025-06-20 07:47:20 (42140): Setting CPU Count for VM. (8)
2025-06-20 07:47:20 (42140): Setting Chipset Options for VM.
2025-06-20 07:47:20 (42140): Setting Graphics Controller Options for VM.
2025-06-20 07:47:21 (42140): Setting Boot Options for VM.
2025-06-20 07:47:21 (42140): Setting Network Configuration for NAT.
2025-06-20 07:47:22 (42140): Enabling VM Network Access.
2025-06-20 07:47:22 (42140): Disabling USB Support for VM.
2025-06-20 07:47:23 (42140): Disabling COM Port Support for VM.
2025-06-20 07:47:51 (42140): Disabling LPT Port Support for VM.
2025-06-20 07:47:52 (42140): Disabling Audio Support for VM.
2025-06-20 07:47:52 (42140): Disabling Clipboard Support for VM.
2025-06-20 07:47:52 (42140): Disabling Drag and Drop Support for VM.
2025-06-20 07:47:53 (42140): Adding storage controller(s) to VM.
2025-06-20 07:47:54 (42140): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-20 07:47:55 (42140): Adding VirtualBox Guest Additions to VM.
2025-06-20 07:47:55 (42140): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-20 07:47:55 (42140): forwarding host port 53308 to guest port 80
2025-06-20 07:47:57 (42140): Enabling remote desktop for VM.
2025-06-20 07:47:57 (42140): Required extension pack not installed, remote desktop not enabled.
2025-06-20 07:47:57 (42140): Enabling shared directory for VM.
2025-06-20 07:47:58 (42140): Starting VM using VBoxManage interface. (boinc_92b7f98da1447281, slot#3)
2025-06-20 07:48:07 (42140): Successfully started VM. (PID = '20780')
2025-06-20 07:48:07 (42140): Reporting VM Process ID to BOINC.
2025-06-20 07:48:07 (42140): Guest Log: BIOS: VirtualBox 7.1.10
2025-06-20 07:48:07 (42140): Guest Log: CPUID EDX: 0x178bfbff
2025-06-20 07:48:07 (42140): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-20 07:48:07 (42140): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-20 07:48:07 (42140): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-20 07:48:07 (42140): Detected: Web Application Enabled (http://localhost:53308)
2025-06-20 07:48:07 (42140): Preference change detected
2025-06-20 07:48:07 (42140): Setting CPU throttle for VM. (100%)
2025-06-20 07:48:07 (42140): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-20 07:48:09 (42140): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-20 07:48:09 (42140): Guest Log: BIOS: Booting from Hard Disk...
2025-06-20 07:48:22 (42140): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-20 07:48:22 (42140): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-20 07:48:22 (42140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-20 07:48:41 (42140): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-20 07:48:41 (42140): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-20 07:49:23 (42140): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000087 main     Log opened 2025-06-20T07:49:23.083043000Z
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000160 main     OS Product: Linux
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000174 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000186 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000197 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000197 main     Process ID: 1408
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2025-06-20 07:49:23 (42140): Guest Log: 00:00:00.000625 main     5.2.32 r132073 started. Verbose level = 0
2025-06-20 07:49:24 (42140): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-20 07:49:24 (42140): Guest Log: [INFO] Mounting shared directory
2025-06-20 07:49:24 (42140): Guest Log: [INFO] Checking for init_data.xml
2025-06-20 07:49:28 (42140): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-20 07:49:28 (42140): Guest Log: [INFO] Detected branch: prod
2025-06-20 07:49:29 (42140): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-20 07:49:29 (42140): Guest Log: Copying input files
2025-06-20 07:49:30 (42140): Guest Log: Copied input files into RunAtlas.
2025-06-20 07:49:30 (42140): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-20 07:49:30 (42140): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-20 07:49:30 (42140): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-20 07:49:30 (42140): Guest Log: Further information can be found at the LHC@home message board.
2025-06-20 07:49:33 (42140): Guest Log: 00:00:10.002912 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 651 806 000ns (GuestNow=1 750 398 573 432 510 000 ns GuestLast=1 750 405 763 084 316 000 ns fSetTimeLastLoop=true )
2025-06-20 07:49:38 (42140): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-20 07:49:38 (42140): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-20 07:49:38 (42140): Guest Log: 2.6.3.0 1685 0 30140 147364 4 1 3117618 4096000 0 65024 0 0 n/a 1 2 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-20 07:49:43 (42140): Guest Log: copied the webapp to /var/www
2025-06-20 07:49:43 (42140): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-20 07:49:43 (42140): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-20 07:49:43 (42140): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-20 07:49:43 (42140): Guest Log:  *** Starting ATLAS job. (PandaID=6699603736 taskID=45275585) ***
2025-06-20 09:05:58 (42140): Guest Log:  *** Job finished ***
2025-06-20 09:05:58 (42140): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:38,853 | INFO     | [payload] validate_post thread has finished
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:39,148 | INFO     | [data] copytool_out thread has finished
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:40,511 | INFO     | [data] queue_monitor thread has finished
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:41,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272664622912)>', '<ExcThread(monitor, started 140271350183680)>']
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:41,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:41,603 | INFO     | [monitor] control thread has ended
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,572 | INFO     | all workflow threads have been joined
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,572 | INFO     | end of generic workflow (traces error code: 0)
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,572 | INFO     | traces error code: 0
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,669 [wrapper] ==== pilot stdout END ====
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,673 [wrapper] ==== wrapper stdout RESUME ====
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,676 [wrapper] pilotpid: 6036
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,678 [wrapper] Pilot exit status: 0
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,799 [wrapper] pandaids: 6699603736
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,817 [wrapper] cleanup supervisor_pilot  1014 6037
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,820 [wrapper] Test setup, not cleaning
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,823 [wrapper] apfmon messages muted
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,825 [wrapper] ==== wrapper stdout END ====
2025-06-20 09:05:58 (42140): Guest Log: 2025-06-20 07:07:46,828 [wrapper] ==== wrapper stderr END ====
2025-06-20 09:05:58 (42140): Guest Log:  *** Error codes and diagnostics ***
2025-06-20 09:05:58 (42140): Guest Log:     "exeErrorCode": 0,
2025-06-20 09:05:58 (42140): Guest Log:     "exeErrorDiag": "",
2025-06-20 09:05:58 (42140): Guest Log:     "pilotErrorCode": 0,
2025-06-20 09:05:58 (42140): Guest Log:     "pilotErrorDiag": "",
2025-06-20 09:05:58 (42140): Guest Log:  *** Listing of results directory ***
2025-06-20 09:05:58 (42140): Guest Log: total 235832
2025-06-20 09:05:58 (42140): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 20 02:54 pilot3.tar.gz
2025-06-20 09:05:58 (42140): Guest Log: -rwx------. 1 atlas atlas     36245 Jun 20 02:56 runpilot2-wrapper.sh
2025-06-20 09:05:58 (42140): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 20 02:56 queuedata.json
2025-06-20 09:05:58 (42140): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jun 20 05:49 start_atlas.sh
2025-06-20 09:05:58 (42140): Guest Log: -rwxr-xr-x. 1 atlas atlas    542878 Jun 20 05:49 input.tar.gz
2025-06-20 09:05:58 (42140): Guest Log: -rwxr-xr-x. 1 atlas atlas      9129 Jun 20 05:49 init_data.xml
2025-06-20 09:05:58 (42140): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 20 05:49 EVNT.45275579._000847.pool.root.1 -> /data/./ATLAS.root_0
2025-06-20 09:05:58 (42140): Guest Log: -rw-r--r--. 1 atlas atlas      2544 Jun 20 05:49 pandaJob.out
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas    967801 Jun 20 05:50 agis_schedconf.cvmfs.json
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas   1582103 Jun 20 05:50 agis_ddmendpoints.agis.ALL.json
2025-06-20 09:05:58 (42140): Guest Log: drwx------. 4 atlas atlas      4096 Jun 20 05:50 pilot3
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas 236269249 Jun 20 07:07 HITS.45275585._012338.pool.root.1
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas        95 Jun 20 07:07 pilot_heartbeat.json
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas      1026 Jun 20 07:07 memory_monitor_summary.json
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas    298782 Jun 20 07:07 log.45275585._012338.job.log.tgz.1
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas      7754 Jun 20 07:07 heartbeat.json
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas      4540 Jun 20 07:07 pilotlog.txt
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas    421836 Jun 20 07:07 log.45275585._012338.job.log.1
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas       357 Jun 20 07:07 output.list
2025-06-20 09:05:58 (42140): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 20 07:07 runtime_log
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas    737280 Jun 20 07:07 result.tar.gz
2025-06-20 09:05:58 (42140): Guest Log: -rw-r--r--. 1 atlas atlas      8571 Jun 20 07:07 runtime_log.err
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas       648 Jun 20 07:07 JKYLDmb6gm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbHeKDmkXwvAn.diag
2025-06-20 09:05:58 (42140): Guest Log: Looking for outputfile HITS.45275585._012338.pool.root.1
2025-06-20 09:05:58 (42140): Guest Log: HITS file was successfully produced
2025-06-20 09:05:58 (42140): Guest Log: -rw-------. 1 atlas atlas 236269249 Jun 20 07:07 /home/atlas/RunAtlas/HITS.45275585._012338.pool.root.1
2025-06-20 09:05:58 (42140): Guest Log: Successfully finished the ATLAS job!
2025-06-20 09:05:58 (42140): Guest Log: Copying the results back to the shared directory!
2025-06-20 09:05:58 (42140): Guest Log:  *** Contents of shared directory: ***
2025-06-20 09:05:58 (42140): Guest Log: total 518660
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root 293527047 Jun 20 05:47 ATLAS.root_0
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root 236269249 Jun 20 07:05 HITS.pool.root.1
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root      9129 Jun 20 05:47 init_data.xml
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root    542878 Jun 20 05:46 input.tar.gz
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root    737280 Jun 20 07:05 result.tar.gz
2025-06-20 09:05:58 (42140): Guest Log: -rwxrwxrwx. 1 root root     15095 Jun 20 05:46 start_atlas.sh
2025-06-20 09:05:58 (42140): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-20 09:05:58 (42140): VM Completion File Detected.
2025-06-20 09:05:58 (42140): Powering off VM.
2025-06-20 09:05:58 (42140): Successfully stopped VM.
2025-06-20 09:05:58 (42140): Deregistering VM. (boinc_92b7f98da1447281, slot#3)
2025-06-20 09:05:58 (42140): Removing network bandwidth throttle group from VM.
2025-06-20 09:05:58 (42140): Removing VM from VirtualBox.
09:06:04 (42140): called boinc_finish(0)

</stderr_txt>
]]>

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