Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:36:09 (2341446): wrapper (7.7.26015): starting
20:36:09 (2341446): wrapper: running run_atlas (--nthreads 8)
[2025-06-19 20:36:09] Arguments: --nthreads 8
[2025-06-19 20:36:09] Threads: 8
[2025-06-19 20:36:09] Checking for CVMFS
[2025-06-19 20:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-19 20:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-19 20:36:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-19 20:36:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-19 20:36:10] 2.11.3.0 449023 226365 157360 147362 2 357 26329786 45568000 8723 130560 0 1338705462 99.739 1205457740 20874 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-06-19 20:36:10] CVMFS is ok
[2025-06-19 20:36:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-19 20:36:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-19 20:36:10] Further information can be found at the LHC@home message board.
[2025-06-19 20:36:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-19 20:36:10] Checking for apptainer binary...
[2025-06-19 20:36:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-19 20:36:10] Running /usr/bin/apptainer --version
[2025-06-19 20:36:10] apptainer version 1.3.3-1.el9
[2025-06-19 20:36:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-19 20:36:10] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0009.triumf.lcg
[2025-06-19 20:36:10] apptainer works
[2025-06-19 20:36:10] Set ATHENA_PROC_NUMBER=8
[2025-06-19 20:36:10] Set ATHENA_CORE_NUMBER=8
[2025-06-19 20:36:10] Starting ATLAS job with PandaID=6700221932
[2025-06-19 20:36:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-19 20:39:29]  *** The last 200 lines of the pilot log: ***
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | found no stored workdir sizes
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | wrong length of table data, x=[1750390600.0], y=[738.0] (must be same and length>=4)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . Timing measurements:
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . get job = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . initial setup = 2 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload setup = 4 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-in = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload execution = 15 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-out = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . log creation = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700221932/pilotlog.txt
[2025-06-19 20:39:29] 2025-06-20 03:38:56,607 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-19 20:39:29] - Log from pilotlog.txt -
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | found no stored workdir sizes
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | wrong length of table data, x=[1750390600.0], y=[738.0] (must be same and length>=4)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . Timing measurements:
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . get job = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . initial setup = 2 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload setup = 4 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-in = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload execution = 15 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-out = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . log creation = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700221932/pilotlog.txt
[2025-06-19 20:39:29] 2025-06-20 03:38:56,608 | WARNING  | 
[2025-06-19 20:39:29] [begin log extracts]
[2025-06-19 20:39:29] - Log from pilotlog.txt -
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 20:39:29] 2025-06-20 03:38:56,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | found no stored workdir sizes
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 20:39:29] 2025-06-20 03:38:56,595 | WARNING  | wrong length of table data, x=[1750390600.0], y=[738.0] (must be same and length>=4)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . Timing measurements:
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . get job = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . initial setup = 2 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload setup = 4 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-in = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . payload execution = 15 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . stage-out = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | . log creation = 0 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,596 | INFO     | ..............................
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 20:39:29] 2025-06-20 03:38:56,597 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700221932/pilotlog.txt
[2025-06-19 20:39:29] [end log extracts]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,608 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,609 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-19 20:39:29] 2025-06-20 03:38:56,683 | INFO     | 
[2025-06-19 20:39:29] 2025-06-20 03:38:56,683 | INFO     | job summary report
[2025-06-19 20:39:29] 2025-06-20 03:38:56,683 | INFO     | --------------------------------------------------
[2025-06-19 20:39:29] 2025-06-20 03:38:56,683 | INFO     | PanDA job id: 6700221932
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | task id: 45275341
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-19 20:36:47,524 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | pilot state: failed 
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | transexitcode: 65
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | exeerrorcode: 65
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | exitcode: 65
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | cpuconsumptiontime: 16 s
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | nevents: 0
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | neventsw: 0
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | pid: 2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:56,684 | INFO     | pgrp: 2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | corecount: 8
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | event service: False
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | sizes: {0: 2376919, 3: 2377181, 11: 2377209, 23: 2400415, 24: 2404707, 25: 2404735, 144: 2405029}
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | --------------------------------------------------
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | 
[2025-06-19 20:39:29] 2025-06-20 03:38:56,685 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-19 20:39:29] 2025-06-20 03:38:56,698 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | job 6700221932 has completed (purged errors)
[2025-06-19 20:39:29] 2025-06-20 03:38:56,700 | INFO     | overall cleanup function is called
[2025-06-19 20:39:29] 2025-06-20 03:38:57,706 | INFO     | --- collectZombieJob: --- 10, [2351337]
[2025-06-19 20:39:29] 2025-06-20 03:38:57,707 | INFO     | zombie collector waiting for pid 2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:57,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-19 20:39:29] 2025-06-20 03:38:57,707 | INFO     | collected zombie processes
[2025-06-19 20:39:29] 2025-06-20 03:38:57,707 | INFO     | will attempt to kill all subprocesses of pid=2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:57,853 | INFO     | process IDs to be killed: [2351337] (in reverse order)
[2025-06-19 20:39:29] 2025-06-20 03:38:57,902 | WARNING  | found no corresponding commands to process id(s)
[2025-06-19 20:39:29] 2025-06-20 03:38:57,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-19 20:39:29] 2025-06-20 03:38:57,907 | INFO     | did not find any defunct processes belonging to 2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:57,911 | INFO     | did not find any defunct processes belonging to 2351337
[2025-06-19 20:39:29] 2025-06-20 03:38:57,912 | INFO     | ready for new job
[2025-06-19 20:39:29] 2025-06-20 03:38:57,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-19 20:39:29] 2025-06-20 03:38:57,913 | INFO     | ***************************************
[2025-06-19 20:39:29] 2025-06-20 03:38:57,913 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-19 20:39:29] 2025-06-20 03:38:57,913 | INFO     | ***************************************
[2025-06-19 20:39:29] 2025-06-20 03:38:57,913 | INFO     | 
[2025-06-19 20:39:29] 2025-06-20 03:38:57,927 | INFO     | architecture information:
[2025-06-19 20:39:29] 2025-06-20 03:38:57,928 | INFO     | executing command: cat /etc/os-release
[2025-06-19 20:39:29] 2025-06-20 03:38:57,940 | INFO     | cat /etc/os-release:
[2025-06-19 20:39:29] NAME="CentOS Linux"
[2025-06-19 20:39:29] VERSION="7 (Core)"
[2025-06-19 20:39:29] ID="centos"
[2025-06-19 20:39:29] ID_LIKE="rhel fedora"
[2025-06-19 20:39:29] VERSION_ID="7"
[2025-06-19 20:39:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-19 20:39:29] ANSI_COLOR="0;31"
[2025-06-19 20:39:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-19 20:39:29] HOME_URL="https://www.centos.org/"
[2025-06-19 20:39:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-19 20:39:29] 
[2025-06-19 20:39:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-19 20:39:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-19 20:39:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-19 20:39:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-19 20:39:29] 
[2025-06-19 20:39:29] 2025-06-20 03:38:57,940 | INFO     | ***************************************
[2025-06-19 20:39:29] 2025-06-20 03:38:58,443 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-19 20:39:29] 2025-06-20 03:38:58,454 | INFO     | sufficient remaining disk space (1245737648128 B)
[2025-06-19 20:39:29] 2025-06-20 03:38:58,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-19 20:39:29] 2025-06-20 03:38:58,455 | INFO     | current server update state: UPDATING_FINAL
[2025-06-19 20:39:29] 2025-06-20 03:38:58,455 | INFO     | update_server=False
[2025-06-19 20:39:29] 2025-06-20 03:38:58,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-19 20:39:29] 2025-06-20 03:38:58,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-19 20:39:29] 2025-06-20 03:38:58,594 | INFO     | all job control threads have been joined
[2025-06-19 20:39:29] 2025-06-20 03:38:58,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-19 20:39:29] 2025-06-20 03:38:59,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-19 20:39:29] 2025-06-20 03:38:59,123 | INFO     | aborting loop
[2025-06-19 20:39:29] 2025-06-20 03:38:59,182 | INFO     | all payload control threads have been joined
[2025-06-19 20:39:29] 2025-06-20 03:38:59,312 | INFO     | all data control threads have been joined
[2025-06-19 20:39:29] 2025-06-20 03:38:59,460 | INFO     | [job] queue monitor thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:38:59,461 | INFO     | [job] retrieve thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:38:59,599 | INFO     | [job] control thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:38:59,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-19 20:39:29] 2025-06-20 03:38:59,942 | INFO     | [payload] failed_post thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,129 | INFO     | [job] job monitor thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,187 | INFO     | [payload] control thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,317 | INFO     | [data] control thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,616 | INFO     | [job] validate thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,684 | INFO     | [payload] execute_payloads thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,774 | INFO     | [job] create_data_payload thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,924 | INFO     | [payload] validate_pre thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,937 | INFO     | [data] copytool_in thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,942 | INFO     | [data] copytool_out thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:00,989 | INFO     | [payload] validate_post thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:03,790 | INFO     | [data] queue_monitor thread has finished
[2025-06-19 20:39:29] 2025-06-20 03:39:05,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143633332032)>', '<ExcThread(monitor, started 140142954141440)>']
[2025-06-19 20:39:29] 2025-06-20 03:39:10,127 | INFO     | all workflow threads have been joined
[2025-06-19 20:39:29] 2025-06-20 03:39:10,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-19 20:39:29] 2025-06-20 03:39:10,128 | INFO     | traces error code: 0
[2025-06-19 20:39:29] 2025-06-20 03:39:10,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-19 20:39:29] 2025-06-20 03:39:29,153 | INFO     | PID=2345035 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-19 20:39:29] 2025-06-20 03:39:29,154 | INFO     | .. there are 12 such processes running
[2025-06-19 20:39:29] 2025-06-20 03:39:29,154 | INFO     | found 0 job(s) in 20 queues
[2025-06-19 20:39:29] 2025-06-20 03:39:29,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-19 20:39:29] 2025-06-20 03:39:29,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-19 20:39:29] 2025-06-20 03:39:29,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-19 20:39:29] 2025-06-20 03:39:29,155 | INFO     | [monitor] control thread has ended
[2025-06-19 20:39:29] 2025-06-20 03:39:29,277 [wrapper] ==== pilot stdout END ====
[2025-06-19 20:39:29] 2025-06-20 03:39:29,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-19 20:39:29] 2025-06-20 03:39:29,281 [wrapper] pilotpid: 2345035
[2025-06-19 20:39:29] 2025-06-20 03:39:29,283 [wrapper] Pilot exit status: 0
[2025-06-19 20:39:29] 2025-06-20 03:39:29,290 [wrapper] pandaids: 6700221932
[2025-06-19 20:39:29] 2025-06-20 03:39:29,320 [wrapper] cleanup supervisor_pilot 2345041 2345036
[2025-06-19 20:39:29] 2025-06-20 03:39:29,322 [wrapper] Test setup, not cleaning
[2025-06-19 20:39:29] 2025-06-20 03:39:29,324 [wrapper] apfmon messages muted
[2025-06-19 20:39:29] 2025-06-20 03:39:29,326 [wrapper] ==== wrapper stdout END ====
[2025-06-19 20:39:29] 2025-06-20 03:39:29,328 [wrapper] ==== wrapper stderr END ====
[2025-06-19 20:39:29]  *** Error codes and diagnostics ***
[2025-06-19 20:39:29]     "exeErrorCode": 65,
[2025-06-19 20:39:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 20:39:29]     "pilotErrorCode": 1305,
[2025-06-19 20:39:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 20:39:29]  *** Listing of results directory ***
[2025-06-19 20:39:29] total 304380
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc    530466 Jun 19 14:13 pilot3.tar.gz
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc      5112 Jun 19 14:41 queuedata.json
[2025-06-19 20:39:29] -rwx------. 1 boinc boinc     36245 Jun 19 14:43 runpilot2-wrapper.sh
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc       100 Jun 19 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-19 20:39:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun 19 20:36 run_atlas
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc       105 Jun 19 20:36 job.xml
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc 307636346 Jun 19 20:36 EVNT.45275338._000070.pool.root.1
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc      6449 Jun 19 20:36 init_data.xml
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc     15095 Jun 19 20:36 start_atlas.sh
[2025-06-19 20:39:29] drwxrwx--x. 2 boinc boinc      4096 Jun 19 20:36 shared
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc    542876 Jun 19 20:36 input.tar.gz
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc         0 Jun 19 20:36 boinc_lockfile
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc      2486 Jun 19 20:36 pandaJob.out
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc    967801 Jun 19 20:36 agis_schedconf.cvmfs.json
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc   1582103 Jun 19 20:36 agis_ddmendpoints.agis.ALL.json
[2025-06-19 20:39:29] drwx------. 4 boinc boinc      4096 Jun 19 20:36 pilot3
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc       964 Jun 19 20:36 memory_monitor_summary.json
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc       523 Jun 19 20:36 boinc_task_state.xml
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc     20587 Jun 19 20:36 log.45275341._001964.job.log.tgz.1
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc      8396 Jun 19 20:38 heartbeat.json
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc      8192 Jun 19 20:39 boinc_mmap_file
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc        22 Jun 19 20:39 wrapper_checkpoint.txt
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc       823 Jun 19 20:39 pilotlog.txt
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc        95 Jun 19 20:39 pilot_heartbeat.json
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc     74111 Jun 19 20:39 log.45275341._001964.job.log.1
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc       188 Jun 19 20:39 output.list
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc       620 Jun 19 20:39 runtime_log
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc    112640 Jun 19 20:39 result.tar.gz
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc      8648 Jun 19 20:39 runtime_log.err
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc       644 Jun 19 20:39 9DrNDmxDcm7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHXsKDmOyzKKo.diag
[2025-06-19 20:39:29] -rw-r--r--. 1 boinc boinc     21801 Jun 19 20:39 stderr.txt
[2025-06-19 20:39:29] No HITS result produced
[2025-06-19 20:39:29]  *** Contents of shared directory: ***
[2025-06-19 20:39:29] total 301092
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc 307636346 Jun 19 20:36 ATLAS.root_0
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc     15095 Jun 19 20:36 start_atlas.sh
[2025-06-19 20:39:29] -rw-r--r--. 2 boinc boinc    542876 Jun 19 20:36 input.tar.gz
[2025-06-19 20:39:29] -rw-------. 1 boinc boinc    112640 Jun 19 20:39 result.tar.gz
20:39:30 (2341446): run_atlas exited; CPU time 20.055767
20:39:30 (2341446): called boinc_finish(0)

</stderr_txt>
]]>

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