Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:10:22 (4033258): wrapper (7.7.26015): starting
18:10:22 (4033258): wrapper: running run_atlas (--nthreads 8)
[2025-06-19 18:10:22] Arguments: --nthreads 8
[2025-06-19 18:10:22] Threads: 8
[2025-06-19 18:10:22] Checking for CVMFS
[2025-06-19 18:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-19 18:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-19 18:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-19 18:10:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-19 18:10:23] 2.11.3.0 25003 424948 162840 147357 0 390 44363907 45568000 7251 130560 0 2183879520 99.756 1773315459 21323 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-06-19 18:10:23] CVMFS is ok
[2025-06-19 18:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-19 18:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-19 18:10:23] Further information can be found at the LHC@home message board.
[2025-06-19 18:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-19 18:10:23] Checking for apptainer binary...
[2025-06-19 18:10:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-19 18:10:23] Running /usr/bin/apptainer --version
[2025-06-19 18:10:23] apptainer version 1.3.3-1.el9
[2025-06-19 18:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-19 18:10:24] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0012.triumf.lcg
[2025-06-19 18:10:24] apptainer works
[2025-06-19 18:10:24] Set ATHENA_PROC_NUMBER=8
[2025-06-19 18:10:24] Set ATHENA_CORE_NUMBER=8
[2025-06-19 18:10:24] Starting ATLAS job with PandaID=6700223515
[2025-06-19 18:10:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-19 18:14:15]  *** The last 200 lines of the pilot log: ***
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | found no stored workdir sizes
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | WARNING  | wrong length of table data, x=[1750381873.0], y=[749.0] (must be same and length>=4)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . Timing measurements:
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . get job = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . initial setup = 3 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload setup = 12 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-in = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload execution = 26 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-out = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | . log creation = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700223515/pilotlog.txt
[2025-06-19 18:14:15] 2025-06-20 01:13:43,123 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-19 18:14:15] - Log from pilotlog.txt -
[2025-06-19 18:14:15] 2025-06-20 01:13:43,107 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 18:14:15] 2025-06-20 01:13:43,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | found no stored workdir sizes
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | WARNING  | wrong length of table data, x=[1750381873.0], y=[749.0] (must be same and length>=4)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . Timing measurements:
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . get job = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . initial setup = 3 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload setup = 12 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-in = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload execution = 26 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-out = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | . log creation = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700223515/pilotlog.txt
[2025-06-19 18:14:15] 2025-06-20 01:13:43,123 | WARNING  | 
[2025-06-19 18:14:15] [begin log extracts]
[2025-06-19 18:14:15] - Log from pilotlog.txt -
[2025-06-19 18:14:15] 2025-06-20 01:13:43,107 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 18:14:15] 2025-06-20 01:13:43,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | WARNING  | found no stored workdir sizes
[2025-06-19 18:14:15] 2025-06-20 01:13:43,109 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | WARNING  | wrong length of table data, x=[1750381873.0], y=[749.0] (must be same and length>=4)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . Timing measurements:
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . get job = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . initial setup = 3 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload setup = 12 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-in = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . payload execution = 26 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,110 | INFO     | . stage-out = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | . log creation = 0 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | ..............................
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 18:14:15] 2025-06-20 01:13:43,111 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700223515/pilotlog.txt
[2025-06-19 18:14:15] [end log extracts]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,124 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,125 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-19 18:14:15] 2025-06-20 01:13:43,233 | INFO     | 
[2025-06-19 18:14:15] 2025-06-20 01:13:43,233 | INFO     | job summary report
[2025-06-19 18:14:15] 2025-06-20 01:13:43,233 | INFO     | --------------------------------------------------
[2025-06-19 18:14:15] 2025-06-20 01:13:43,233 | INFO     | PanDA job id: 6700223515
[2025-06-19 18:14:15] 2025-06-20 01:13:43,233 | INFO     | task id: 45275341
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-19 18:11:25,271 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | pilot state: failed 
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | transexitcode: 65
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | exeerrorcode: 65
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | exitcode: 65
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | cpuconsumptiontime: 16 s
[2025-06-19 18:14:15] 2025-06-20 01:13:43,234 | INFO     | nevents: 0
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | neventsw: 0
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | pid: 4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | pgrp: 4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | corecount: 8
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | event service: False
[2025-06-19 18:14:15] 2025-06-20 01:13:43,241 | INFO     | sizes: {0: 2376868, 3: 2377130, 11: 2377158, 43: 2400280, 45: 2404572, 49: 2404600, 171: 2404894}
[2025-06-19 18:14:15] 2025-06-20 01:13:43,242 | INFO     | --------------------------------------------------
[2025-06-19 18:14:15] 2025-06-20 01:13:43,242 | INFO     | 
[2025-06-19 18:14:15] 2025-06-20 01:13:43,242 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-19 18:14:15] 2025-06-20 01:13:43,262 | INFO     | job 6700223515 has completed (purged errors)
[2025-06-19 18:14:15] 2025-06-20 01:13:43,262 | INFO     | overall cleanup function is called
[2025-06-19 18:14:15] 2025-06-20 01:13:44,269 | INFO     | --- collectZombieJob: --- 10, [4047760]
[2025-06-19 18:14:15] 2025-06-20 01:13:44,269 | INFO     | zombie collector waiting for pid 4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:44,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-19 18:14:15] 2025-06-20 01:13:44,269 | INFO     | collected zombie processes
[2025-06-19 18:14:15] 2025-06-20 01:13:44,269 | INFO     | will attempt to kill all subprocesses of pid=4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:44,447 | INFO     | process IDs to be killed: [4047760] (in reverse order)
[2025-06-19 18:14:15] 2025-06-20 01:13:44,526 | WARNING  | found no corresponding commands to process id(s)
[2025-06-19 18:14:15] 2025-06-20 01:13:44,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-19 18:14:15] 2025-06-20 01:13:44,532 | INFO     | did not find any defunct processes belonging to 4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:44,539 | INFO     | did not find any defunct processes belonging to 4047760
[2025-06-19 18:14:15] 2025-06-20 01:13:44,540 | INFO     | ready for new job
[2025-06-19 18:14:15] 2025-06-20 01:13:44,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-19 18:14:15] 2025-06-20 01:13:44,543 | INFO     | ***************************************
[2025-06-19 18:14:15] 2025-06-20 01:13:44,543 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-19 18:14:15] 2025-06-20 01:13:44,543 | INFO     | ***************************************
[2025-06-19 18:14:15] 2025-06-20 01:13:44,544 | INFO     | 
[2025-06-19 18:14:15] 2025-06-20 01:13:44,557 | INFO     | architecture information:
[2025-06-19 18:14:15] 2025-06-20 01:13:44,558 | INFO     | executing command: cat /etc/os-release
[2025-06-19 18:14:15] 2025-06-20 01:13:44,572 | INFO     | cat /etc/os-release:
[2025-06-19 18:14:15] NAME="CentOS Linux"
[2025-06-19 18:14:15] VERSION="7 (Core)"
[2025-06-19 18:14:15] ID="centos"
[2025-06-19 18:14:15] ID_LIKE="rhel fedora"
[2025-06-19 18:14:15] VERSION_ID="7"
[2025-06-19 18:14:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-19 18:14:15] ANSI_COLOR="0;31"
[2025-06-19 18:14:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-19 18:14:15] HOME_URL="https://www.centos.org/"
[2025-06-19 18:14:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-19 18:14:15] 
[2025-06-19 18:14:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-19 18:14:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-19 18:14:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-19 18:14:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-19 18:14:15] 
[2025-06-19 18:14:15] 2025-06-20 01:13:44,572 | INFO     | ***************************************
[2025-06-19 18:14:15] 2025-06-20 01:13:45,084 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-19 18:14:15] 2025-06-20 01:13:45,161 | INFO     | sufficient remaining disk space (1162002563072 B)
[2025-06-19 18:14:15] 2025-06-20 01:13:45,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-19 18:14:15] 2025-06-20 01:13:45,162 | INFO     | current server update state: UPDATING_FINAL
[2025-06-19 18:14:15] 2025-06-20 01:13:45,162 | INFO     | update_server=False
[2025-06-19 18:14:15] 2025-06-20 01:13:45,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-19 18:14:15] 2025-06-20 01:13:45,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-19 18:14:15] 2025-06-20 01:13:45,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-19 18:14:15] 2025-06-20 01:13:45,184 | INFO     | aborting loop
[2025-06-19 18:14:15] 2025-06-20 01:13:45,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-19 18:14:15] 2025-06-20 01:13:45,971 | INFO     | all payload control threads have been joined
[2025-06-19 18:14:15] 2025-06-20 01:13:46,001 | INFO     | all job control threads have been joined
[2025-06-19 18:14:15] 2025-06-20 01:13:46,014 | INFO     | all data control threads have been joined
[2025-06-19 18:14:15] 2025-06-20 01:13:46,168 | INFO     | [job] retrieve thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,173 | INFO     | [job] queue monitor thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,190 | INFO     | [job] job monitor thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,366 | INFO     | [job] validate thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,496 | INFO     | [payload] failed_post thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,622 | INFO     | [job] create_data_payload thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,733 | INFO     | [payload] validate_pre thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:46,977 | INFO     | [payload] control thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,019 | INFO     | [data] control thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,021 | INFO     | [job] control thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,165 | INFO     | [payload] validate_post thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,172 | INFO     | [data] copytool_in thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,239 | INFO     | [payload] execute_payloads thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:47,611 | INFO     | [data] copytool_out thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:48,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-19 18:14:15] 2025-06-20 01:13:52,542 | INFO     | [data] queue_monitor thread has finished
[2025-06-19 18:14:15] 2025-06-20 01:13:53,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950640736064)>', '<ExcThread(monitor, started 139950311835392)>']
[2025-06-19 18:14:15] 2025-06-20 01:13:58,699 | INFO     | all workflow threads have been joined
[2025-06-19 18:14:15] 2025-06-20 01:13:58,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-19 18:14:15] 2025-06-20 01:13:58,700 | INFO     | traces error code: 0
[2025-06-19 18:14:15] 2025-06-20 01:13:58,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-19 18:14:15] 2025-06-20 01:14:15,394 | INFO     | PID=4036858 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-19 18:14:15] 2025-06-20 01:14:15,394 | INFO     | .. there are 12 such processes running
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | INFO     | found 0 job(s) in 20 queues
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | CRITICAL | thread 'MainThread' is not alive
[2025-06-19 18:14:15] 2025-06-20 01:14:15,395 | INFO     | [monitor] control thread has ended
[2025-06-19 18:14:15] 2025-06-20 01:14:15,505 [wrapper] ==== pilot stdout END ====
[2025-06-19 18:14:15] 2025-06-20 01:14:15,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-19 18:14:15] 2025-06-20 01:14:15,513 [wrapper] pilotpid: 4036858
[2025-06-19 18:14:15] 2025-06-20 01:14:15,523 [wrapper] Pilot exit status: 0
[2025-06-19 18:14:15] 2025-06-20 01:14:15,555 [wrapper] pandaids: 6700223515
[2025-06-19 18:14:15] 2025-06-20 01:14:15,599 [wrapper] cleanup supervisor_pilot 4036864 4036859
[2025-06-19 18:14:15] 2025-06-20 01:14:15,602 [wrapper] Test setup, not cleaning
[2025-06-19 18:14:15] 2025-06-20 01:14:15,604 [wrapper] apfmon messages muted
[2025-06-19 18:14:15] 2025-06-20 01:14:15,608 [wrapper] ==== wrapper stdout END ====
[2025-06-19 18:14:15] 2025-06-20 01:14:15,611 [wrapper] ==== wrapper stderr END ====
[2025-06-19 18:14:15]  *** Error codes and diagnostics ***
[2025-06-19 18:14:15]     "exeErrorCode": 65,
[2025-06-19 18:14:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 18:14:15]     "pilotErrorCode": 1305,
[2025-06-19 18:14:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 18:14:15]  *** Listing of results directory ***
[2025-06-19 18:14:15] total 303484
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc    530466 Jun 19 15:18 pilot3.tar.gz
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc      5112 Jun 19 15:21 queuedata.json
[2025-06-19 18:14:15] -rwx------. 1 boinc boinc     36245 Jun 19 15:22 runpilot2-wrapper.sh
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc       100 Jun 19 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-19 18:14:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun 19 18:10 run_atlas
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc       105 Jun 19 18:10 job.xml
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc      6451 Jun 19 18:10 init_data.xml
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc 306718854 Jun 19 18:10 EVNT.45275338._000087.pool.root.1
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc     15095 Jun 19 18:10 start_atlas.sh
[2025-06-19 18:14:15] drwxrwx--x. 2 boinc boinc      4096 Jun 19 18:10 shared
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc    542864 Jun 19 18:10 input.tar.gz
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc         0 Jun 19 18:10 boinc_lockfile
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc      2485 Jun 19 18:10 pandaJob.out
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc    967109 Jun 19 18:10 agis_schedconf.cvmfs.json
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc   1582103 Jun 19 18:10 agis_ddmendpoints.agis.ALL.json
[2025-06-19 18:14:15] drwx------. 4 boinc boinc      4096 Jun 19 18:10 pilot3
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc       522 Jun 19 18:11 boinc_task_state.xml
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc       971 Jun 19 18:11 memory_monitor_summary.json
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc     20937 Jun 19 18:11 log.45275341._002392.job.log.tgz.1
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc        95 Jun 19 18:13 pilot_heartbeat.json
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc      8352 Jun 19 18:13 heartbeat.json
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc      8192 Jun 19 18:14 boinc_mmap_file
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc        22 Jun 19 18:14 wrapper_checkpoint.txt
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc       893 Jun 19 18:14 pilotlog.txt
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc     76370 Jun 19 18:14 log.45275341._002392.job.log.1
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc       188 Jun 19 18:14 output.list
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc       620 Jun 19 18:14 runtime_log
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc    112640 Jun 19 18:14 result.tar.gz
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc      8648 Jun 19 18:14 runtime_log.err
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc       644 Jun 19 18:14 kiyMDmwpcm7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAcsKDmtZm6en.diag
[2025-06-19 18:14:15] -rw-r--r--. 1 boinc boinc     21794 Jun 19 18:14 stderr.txt
[2025-06-19 18:14:15] No HITS result produced
[2025-06-19 18:14:15]  *** Contents of shared directory: ***
[2025-06-19 18:14:15] total 300196
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc 306718854 Jun 19 18:10 ATLAS.root_0
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc     15095 Jun 19 18:10 start_atlas.sh
[2025-06-19 18:14:15] -rw-r--r--. 2 boinc boinc    542864 Jun 19 18:10 input.tar.gz
[2025-06-19 18:14:15] -rw-------. 1 boinc boinc    112640 Jun 19 18:14 result.tar.gz
18:14:16 (4033258): run_atlas exited; CPU time 22.360463
18:14:16 (4033258): called boinc_finish(0)

</stderr_txt>
]]>

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